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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011168 Bordetella pertussis strain C958 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 29 0

Results visualization

1. NZ_CP011168
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011168_1 250592-250676 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011168_2 432035-432128 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011168_3 995303-995397 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011168_4 1888735-1888862 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011168_5 3425301-3425410 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164894 : 225405 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) tRNA,transposase,protease NA
DBSCAN-SWA_4 233337 : 286925 47 Bacillus_phage(25.0%) tRNA,transposase,protease NA
DBSCAN-SWA_5 390858 : 448367 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 589372 : 650562 55 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_7 655886 : 702077 50 uncultured_Caudovirales_phage(18.18%) transposase,tRNA,terminase,tail NA
DBSCAN-SWA_8 708243 : 762173 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_9 813766 : 885779 60 Acinetobacter_phage(20.0%) holin,transposase NA
DBSCAN-SWA_10 893413 : 956494 54 Bacillus_phage(25.0%) holin,transposase NA
DBSCAN-SWA_11 975916 : 1046183 57 Streptococcus_phage(14.29%) transposase NA
DBSCAN-SWA_12 1058401 : 1113831 43 uncultured_Mediterranean_phage(50.0%) tRNA,transposase,holin NA
DBSCAN-SWA_13 1313908 : 1382395 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_14 1442886 : 1498374 56 Mollivirus(16.67%) transposase,protease NA
DBSCAN-SWA_15 1790944 : 1838959 42 Moraxella_phage(18.18%) tRNA,transposase NA
DBSCAN-SWA_16 1900521 : 1959791 51 Klosneuvirus(40.0%) tRNA,transposase,protease NA
DBSCAN-SWA_17 1970031 : 2027528 56 Staphylococcus_phage(16.67%) transposase NA
DBSCAN-SWA_18 2043078 : 2107447 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_19 2293915 : 2355263 52 Yellowstone_lake_phycodnavirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_20 2376054 : 2447208 55 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_21 2502410 : 2555828 56 Planktothrix_phage(15.38%) tRNA,transposase NA
DBSCAN-SWA_22 2680873 : 2721542 42 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_23 2777007 : 2849877 58 Moraxella_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_24 2853020 : 2920880 50 uncultured_Mediterranean_phage(28.57%) transposase,protease NA
DBSCAN-SWA_25 2951266 : 2994957 39 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_26 3374903 : 3428644 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_27 3434799 : 3494099 48 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_28 3509037 : 3568159 48 Planktothrix_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_29 4022425 : 4075857 45 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage