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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011169 Bordetella pertussis strain D521 chromosome, complete genome 5 crisprs DEDDh,cas3,csa3,DinG 0 0 26 0

Results visualization

1. NZ_CP011169
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011169_1 250592-250676 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011169_2 622951-623060 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011169_3 2118676-2118803 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011169_4 2904403-2904519 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011169_5 3618125-3618218 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164894 : 225405 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) tRNA,transposase,protease NA
DBSCAN-SWA_4 233337 : 286925 47 Bacillus_phage(25.0%) tRNA,transposase,protease NA
DBSCAN-SWA_5 468502 : 585348 101 Acinetobacter_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_6 589762 : 653595 47 Pandoravirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_7 672506 : 749815 57 Bacillus_phage(20.0%) tRNA,transposase,integrase,protease attL 719643:719661|attR 739531:739549
DBSCAN-SWA_8 995750 : 1098144 93 Bacillus_virus(27.27%) tRNA,transposase NA
DBSCAN-SWA_9 1128530 : 1199502 52 uncultured_Mediterranean_phage(25.0%) protease,transposase NA
DBSCAN-SWA_10 1246896 : 1327771 58 Bacillus_virus(25.0%) tRNA,transposase NA
DBSCAN-SWA_11 1447166 : 1500346 46 Salmonella_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_12 1542195 : 1610225 59 Streptococcus_virus(11.11%) tRNA,transposase NA
DBSCAN-SWA_13 1646174 : 1701765 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_14 2021934 : 2079213 49 Klosneuvirus(14.29%) tRNA,transposase NA
DBSCAN-SWA_15 2130462 : 2189732 51 Klosneuvirus(40.0%) tRNA,transposase,protease NA
DBSCAN-SWA_16 2199972 : 2244295 44 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_17 2274068 : 2338437 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_18 2502898 : 2561142 53 Planktothrix_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_19 2603422 : 2669922 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_20 2869310 : 2942633 52 Catovirus(22.22%) tRNA,transposase,protease NA
DBSCAN-SWA_21 2954358 : 3003971 42 uncultured_Mediterranean_phage(50.0%) tRNA,transposase,holin NA
DBSCAN-SWA_22 3024922 : 3097416 58 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_23 3110923 : 3164441 44 Bacillus_phage(33.33%) transposase,holin NA
DBSCAN-SWA_24 3228899 : 3302061 57 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_25 3313348 : 3413461 107 uncultured_Caudovirales_phage(14.29%) protease,transposase,tail,tRNA,terminase NA
DBSCAN-SWA_26 4023268 : 4076700 45 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage