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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011173 Bordetella pertussis strain E587 chromosome, complete genome 5 crisprs DEDDh,cas3,csa3,DinG 0 0 27 0

Results visualization

1. NZ_CP011173
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011173_1 250591-250675 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011173_2 623999-624108 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011173_3 2118159-2118286 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011173_4 2903888-2904004 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011173_5 3618659-3618752 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164893 : 225404 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) tRNA,protease,transposase NA
DBSCAN-SWA_4 233336 : 286924 47 Bacillus_phage(25.0%) tRNA,protease,transposase NA
DBSCAN-SWA_5 555309 : 614609 48 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_6 620764 : 674505 48 Salmonella_phage(33.33%) transposase NA
DBSCAN-SWA_7 723443 : 763393 28 Pseudomonas_phage(33.33%) tRNA,protease,transposase,integrase attL 720691:720709|attR 740579:740597
DBSCAN-SWA_8 773320 : 820938 46 Bovine_alphaherpesvirus(10.0%) tRNA,protease,transposase,holin NA
DBSCAN-SWA_9 996798 : 1099191 93 Bacillus_virus(27.27%) tRNA,transposase NA
DBSCAN-SWA_10 1129577 : 1200549 52 uncultured_Mediterranean_phage(25.0%) protease,transposase NA
DBSCAN-SWA_11 1247943 : 1369585 100 Bacillus_virus(14.29%) tRNA,transposase NA
DBSCAN-SWA_12 1449262 : 1498706 44 Salmonella_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_13 1540555 : 1608641 59 Streptococcus_virus(11.11%) tRNA,transposase NA
DBSCAN-SWA_14 1644608 : 1700199 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_15 2020368 : 2068383 42 Moraxella_phage(18.18%) tRNA,transposase NA
DBSCAN-SWA_16 2129945 : 2189215 51 Klosneuvirus(40.0%) tRNA,protease,transposase NA
DBSCAN-SWA_17 2199455 : 2243778 43 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_18 2273551 : 2337920 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_19 2502381 : 2557861 50 Planktothrix_phage(40.0%) tRNA,transposase NA
DBSCAN-SWA_20 2603954 : 2670454 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_21 2868793 : 2942118 52 Catovirus(22.22%) tRNA,protease,transposase NA
DBSCAN-SWA_22 2953843 : 3004505 43 uncultured_Mediterranean_phage(50.0%) tRNA,transposase,holin NA
DBSCAN-SWA_23 3025456 : 3097950 58 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_24 3111457 : 3164975 44 Bacillus_phage(33.33%) transposase,holin NA
DBSCAN-SWA_25 3229433 : 3302595 57 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_26 3313882 : 3413995 107 uncultured_Caudovirales_phage(14.29%) terminase,tail,tRNA,protease,transposase NA
DBSCAN-SWA_27 4023796 : 4083986 51 Planktothrix_phage(28.57%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage