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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011176 Bordetella pertussis strain F011 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 29 0

Results visualization

1. NZ_CP011176
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011176_1 250592-250676 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011176_2 432036-432129 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011176_3 996353-996447 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011176_4 1891726-1891853 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011176_5 3428296-3428405 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164893 : 225405 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,transposase,tRNA NA
DBSCAN-SWA_4 233337 : 286925 47 Bacillus_phage(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_5 390859 : 448368 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 590422 : 651612 55 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_7 656936 : 703127 50 uncultured_Caudovirales_phage(18.18%) tail,transposase,terminase,tRNA NA
DBSCAN-SWA_8 709293 : 763223 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_9 885812 : 953788 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_10 997317 : 1069829 59 Enterococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_11 1073582 : 1134610 51 Catovirus(20.0%) transposase,holin,tRNA NA
DBSCAN-SWA_12 1152180 : 1217764 52 Erysipelothrix_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_13 1316900 : 1385387 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_14 1445878 : 1501365 56 Mollivirus(16.67%) transposase,protease NA
DBSCAN-SWA_15 1793935 : 1841950 42 Moraxella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_16 1903512 : 1962782 51 Klosneuvirus(40.0%) protease,transposase,tRNA NA
DBSCAN-SWA_17 1973022 : 2017345 44 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_18 2047118 : 2111487 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_19 2297955 : 2359303 52 Yellowstone_lake_phycodnavirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_20 2380094 : 2451248 54 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_21 2535448 : 2597749 54 Salmonella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_22 2683866 : 2724535 42 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_23 2780000 : 2852871 58 Moraxella_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_24 2856014 : 2922826 49 uncultured_Mediterranean_phage(28.57%) transposase,protease NA
DBSCAN-SWA_25 2953212 : 2996903 39 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_26 3377898 : 3431639 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_27 3437794 : 3497095 47 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_28 3512033 : 3570106 47 Planktothrix_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_29 4001269 : 4066181 59 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage