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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011178 Bordetella pertussis strain F658 chromosome, complete genome 5 crisprs DEDDh,cas3,csa3,DinG 0 0 27 0

Results visualization

1. NZ_CP011178
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011178_1 250626-250710 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011178_2 624034-624143 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011178_3 2124014-2124141 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011178_4 2906597-2906713 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011178_5 3623460-3623553 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164892 : 225439 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) transposase,protease,tRNA NA
DBSCAN-SWA_4 233371 : 286959 47 Bacillus_phage(25.0%) transposase,protease,tRNA NA
DBSCAN-SWA_5 555344 : 614644 48 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_6 620799 : 674540 48 Salmonella_phage(33.33%) transposase NA
DBSCAN-SWA_7 723478 : 765526 30 Pseudomonas_phage(33.33%) transposase,protease,tRNA,integrase attL 720726:720744|attR 740614:740632
DBSCAN-SWA_8 775453 : 823071 46 Bovine_alphaherpesvirus(10.0%) transposase,protease,tRNA,holin NA
DBSCAN-SWA_9 998931 : 1101324 93 Bacillus_virus(27.27%) transposase,tRNA NA
DBSCAN-SWA_10 1131710 : 1202681 52 uncultured_Mediterranean_phage(25.0%) transposase,protease NA
DBSCAN-SWA_11 1218886 : 1275588 42 Agrobacterium_phage(20.0%) transposase,tRNA NA
DBSCAN-SWA_12 1303955 : 1361166 48 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_13 1451399 : 1503552 45 Salmonella_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_14 1547477 : 1615563 59 Streptococcus_virus(11.11%) transposase,tRNA NA
DBSCAN-SWA_15 1651512 : 1707103 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_16 2027272 : 2084551 49 Klosneuvirus(14.29%) transposase,tRNA NA
DBSCAN-SWA_17 2135800 : 2195070 51 Klosneuvirus(40.0%) transposase,protease,tRNA NA
DBSCAN-SWA_18 2205310 : 2262807 56 Staphylococcus_phage(16.67%) transposase NA
DBSCAN-SWA_19 2506138 : 2564382 53 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_20 2606662 : 2673162 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_21 2871501 : 2944827 52 Catovirus(22.22%) transposase,protease,tRNA NA
DBSCAN-SWA_22 2956552 : 3006165 42 uncultured_Mediterranean_phage(50.0%) tRNA,transposase,holin NA
DBSCAN-SWA_23 3027116 : 3099604 58 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_24 3113111 : 3166629 44 Bacillus_phage(33.33%) transposase,holin NA
DBSCAN-SWA_25 3231087 : 3304249 57 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_26 3315536 : 3417747 109 uncultured_Caudovirales_phage(14.29%) transposase,tRNA,terminase,protease,tail NA
DBSCAN-SWA_27 4028603 : 4071461 35 Planktothrix_phage(50.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage