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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011179 Bordetella pertussis strain F670 chromosome, complete genome 4 crisprs DEDDh,cas3,csa3,DinG 0 0 25 0

Results visualization

1. NZ_CP011179
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011179_1 250591-250675 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011179_2 622950-623059 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011179_3 2906526-2906642 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011179_4 3620248-3620341 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164893 : 225404 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,tRNA,transposase NA
DBSCAN-SWA_4 233336 : 286924 48 Bacillus_phage(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_5 468501 : 585347 101 Acinetobacter_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_6 589761 : 654643 48 Pandoravirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_7 673554 : 750863 58 Bacillus_phage(20.0%) protease,tRNA,transposase,integrase attL 720691:720709|attR 740579:740597
DBSCAN-SWA_8 1004103 : 1098140 88 Bacillus_virus(30.0%) transposase NA
DBSCAN-SWA_9 1128526 : 1199498 53 uncultured_Mediterranean_phage(25.0%) protease,transposase NA
DBSCAN-SWA_10 1246892 : 1327767 59 Bacillus_virus(25.0%) tRNA,transposase NA
DBSCAN-SWA_11 1447162 : 1499315 46 Salmonella_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_12 1543240 : 1611327 59 Streptococcus_virus(11.11%) tRNA,transposase NA
DBSCAN-SWA_13 1647276 : 1702867 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_14 1935631 : 2005283 55 Staphylococcus_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_15 2016779 : 2066175 45 Erysipelothrix_phage(16.67%) transposase NA
DBSCAN-SWA_16 2077379 : 2118070 36 Klosneuvirus(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_17 2145853 : 2211396 58 Lake_Baikal_phage(20.0%) protease,tRNA,transposase NA
DBSCAN-SWA_18 2505019 : 2563263 54 Planktothrix_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_19 2605543 : 2672043 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_20 2871431 : 2944756 53 Catovirus(22.22%) protease,tRNA,transposase NA
DBSCAN-SWA_21 2956481 : 3006094 42 uncultured_Mediterranean_phage(50.0%) tRNA,transposase,holin NA
DBSCAN-SWA_22 3014304 : 3076459 46 Erysipelothrix_phage(20.0%) transposase NA
DBSCAN-SWA_23 3095881 : 3151011 48 Bacillus_phage(28.57%) transposase NA
DBSCAN-SWA_24 3232071 : 3305233 57 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_25 3316520 : 3416633 108 uncultured_Caudovirales_phage(14.29%) transposase,tRNA,terminase,protease,tail NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage