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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011184 Bordetella pertussis strain H579 chromosome, complete genome 4 crisprs DEDDh,cas3,csa3,DinG 0 0 29 0

Results visualization

1. NZ_CP011184
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011184_1 250590-250674 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011184_2 624000-624109 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011184_3 2910714-2910830 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011184_4 3626534-3626627 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164892 : 225403 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,tRNA,transposase NA
DBSCAN-SWA_4 233335 : 286925 47 Bacillus_phage(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_5 555310 : 614610 48 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_6 620765 : 674506 48 Salmonella_phage(33.33%) transposase NA
DBSCAN-SWA_7 723444 : 763394 30 Pseudomonas_phage(33.33%) transposase,tRNA,protease,integrase attL 720692:720710|attR 740580:740598
DBSCAN-SWA_8 773321 : 820939 47 Bovine_alphaherpesvirus(10.0%) protease,holin,tRNA,transposase NA
DBSCAN-SWA_9 1005154 : 1099191 88 Bacillus_virus(30.0%) transposase NA
DBSCAN-SWA_10 1129577 : 1200548 53 uncultured_Mediterranean_phage(25.0%) protease,transposase NA
DBSCAN-SWA_11 1241619 : 1323754 60 Bacillus_virus(25.0%) tRNA,transposase NA
DBSCAN-SWA_12 1327865 : 1368534 42 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_13 1448211 : 1500364 46 Salmonella_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_14 1544289 : 1604201 52 Streptococcus_virus(12.5%) tRNA,transposase NA
DBSCAN-SWA_15 1649373 : 1704964 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_16 1908348 : 1964132 49 Faecalibacterium_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_17 2018831 : 2061316 39 Erysipelothrix_phage(20.0%) transposase NA
DBSCAN-SWA_18 2067286 : 2119083 50 Klosneuvirus(22.22%) protease,tRNA,transposase NA
DBSCAN-SWA_19 2146866 : 2212415 58 Lake_Baikal_phage(20.0%) protease,tRNA,transposase NA
DBSCAN-SWA_20 2298592 : 2362169 49 uncultured_Caudovirales_phage(11.11%) protease,transposase NA
DBSCAN-SWA_21 2508159 : 2563639 51 Planktothrix_phage(40.0%) tRNA,transposase NA
DBSCAN-SWA_22 2609731 : 2676231 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_23 2875619 : 2948944 53 Catovirus(22.22%) protease,tRNA,transposase NA
DBSCAN-SWA_24 2960669 : 3010282 42 uncultured_Mediterranean_phage(50.0%) holin,tRNA,transposase NA
DBSCAN-SWA_25 3031233 : 3103728 57 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_26 3117235 : 3170753 44 Bacillus_phage(33.33%) holin,transposase NA
DBSCAN-SWA_27 3235211 : 3305263 55 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_28 3308471 : 3413823 110 uncultured_Caudovirales_phage(14.29%) terminase,protease,tRNA,tail,transposase NA
DBSCAN-SWA_29 4031677 : 4085109 46 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage