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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011188 Bordetella pertussis strain H707 chromosome, complete genome 5 crisprs DEDDh,cas3,csa3,DinG 0 0 26 0

Results visualization

1. NZ_CP011188
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011188_1 250591-250675 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011188_2 622950-623059 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011188_3 2121886-2122013 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011188_4 2908487-2908603 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011188_5 3624307-3624400 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164893 : 225404 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) transposase,tRNA,protease NA
DBSCAN-SWA_4 233336 : 286924 47 Bacillus_phage(25.0%) transposase,tRNA,protease NA
DBSCAN-SWA_5 468501 : 585347 101 Acinetobacter_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_6 589761 : 653594 47 Pandoravirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_7 672505 : 741674 54 Bacillus_phage(20.0%) integrase,transposase,tRNA,protease attL 719642:719660|attR 740567:740585
DBSCAN-SWA_8 996786 : 1099179 93 Bacillus_virus(27.27%) transposase,tRNA NA
DBSCAN-SWA_9 1129565 : 1200536 52 uncultured_Mediterranean_phage(25.0%) transposase,protease NA
DBSCAN-SWA_10 1247930 : 1328805 58 Bacillus_virus(25.0%) transposase,tRNA NA
DBSCAN-SWA_11 1448199 : 1500357 45 Salmonella_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_12 1544282 : 1612368 59 Streptococcus_virus(11.11%) transposase,tRNA NA
DBSCAN-SWA_13 1648335 : 1703926 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_14 2024095 : 2072110 42 Moraxella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_15 2119528 : 2174957 50 uncultured_Caudovirales_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_16 2178018 : 2225307 46 Klosneuvirus(22.22%) transposase,tRNA,protease NA
DBSCAN-SWA_17 2246000 : 2299240 48 Mycobacterium_phage(33.33%) transposase NA
DBSCAN-SWA_18 2507162 : 2562642 50 Planktothrix_phage(40.0%) transposase,tRNA NA
DBSCAN-SWA_19 2608735 : 2675235 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_20 2873392 : 2946717 52 Catovirus(22.22%) transposase,tRNA,protease NA
DBSCAN-SWA_21 2958442 : 3009104 43 uncultured_Mediterranean_phage(50.0%) holin,transposase,tRNA NA
DBSCAN-SWA_22 3030055 : 3102549 58 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_23 3116056 : 3169574 44 Bacillus_phage(33.33%) holin,transposase NA
DBSCAN-SWA_24 3234032 : 3307194 57 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_25 3318481 : 3419643 108 uncultured_Caudovirales_phage(14.29%) terminase,transposase,tail,tRNA,protease NA
DBSCAN-SWA_26 4029451 : 4089641 51 Planktothrix_phage(28.57%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage