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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011191 Bordetella pertussis strain H754 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 28 0

Results visualization

1. NZ_CP011191
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011191_1 250590-250674 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011191_2 432033-432126 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011191_3 996351-996445 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011191_4 1892778-1892905 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011191_5 3426798-3426907 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164892 : 225403 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) tRNA,transposase,protease NA
DBSCAN-SWA_4 233335 : 286923 47 Bacillus_phage(25.0%) tRNA,transposase,protease NA
DBSCAN-SWA_5 390856 : 448365 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 590419 : 651610 55 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_7 656934 : 703125 50 uncultured_Caudovirales_phage(18.18%) tRNA,terminase,transposase,tail NA
DBSCAN-SWA_8 709291 : 763221 46 Planktothrix_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_9 814814 : 886827 60 Acinetobacter_phage(20.0%) holin,transposase NA
DBSCAN-SWA_10 894461 : 957542 54 Bacillus_phage(25.0%) holin,transposase NA
DBSCAN-SWA_11 976964 : 1047231 57 Streptococcus_phage(14.29%) transposase NA
DBSCAN-SWA_12 1059449 : 1116831 47 uncultured_Mediterranean_phage(37.5%) tRNA,holin,transposase,protease NA
DBSCAN-SWA_13 1316902 : 1382331 55 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_14 1446929 : 1502417 56 Mollivirus(16.67%) transposase,protease NA
DBSCAN-SWA_15 1794987 : 1843002 42 Moraxella_phage(18.18%) tRNA,transposase NA
DBSCAN-SWA_16 1904564 : 2035625 119 Klosneuvirus(18.75%) tRNA,transposase,protease NA
DBSCAN-SWA_17 2047121 : 2111490 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_18 2297958 : 2359306 52 Yellowstone_lake_phycodnavirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_19 2380097 : 2449753 53 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_20 2533953 : 2585125 48 Salmonella_phage(20.0%) tRNA,transposase NA
DBSCAN-SWA_21 2683420 : 2724089 42 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_22 2779554 : 2852424 58 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_23 2855567 : 2922377 49 uncultured_Mediterranean_phage(28.57%) transposase,protease NA
DBSCAN-SWA_24 2944669 : 2996454 46 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_25 3376400 : 3430141 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_26 3436296 : 3495596 48 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_27 3510534 : 3568607 47 Planktothrix_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_28 4023928 : 4077360 45 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage