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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011193 Bordetella pertussis strain H784 chromosome, complete genome 4 crisprs cas3,DinG,csa3,DEDDh 0 0 30 0

Results visualization

1. NZ_CP011193
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011193_1 363321-363414 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011193_2 927638-927732 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011193_3 3360630-3360739 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011193_4 3735112-3735196 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 143080 : 217424 54 uncultured_Mediterranean_phage(15.38%) transposase NA
DBSCAN-SWA_2 520658 : 581848 55 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_3 587172 : 633363 50 uncultured_Caudovirales_phage(18.18%) terminase,tRNA,tail,transposase NA
DBSCAN-SWA_4 639529 : 693459 46 Planktothrix_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_5 745052 : 794074 43 Acinetobacter_phage(25.0%) holin,transposase NA
DBSCAN-SWA_6 817097 : 870615 44 Acidithiobacillus_phage(33.33%) holin,transposase NA
DBSCAN-SWA_7 884122 : 956616 58 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_8 968223 : 1017161 46 uncultured_Mediterranean_phage(37.5%) tRNA,holin,transposase NA
DBSCAN-SWA_9 1026229 : 1088768 48 Planktothrix_phage(18.18%) protease,tRNA,transposase NA
DBSCAN-SWA_10 1248188 : 1316675 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_11 1377166 : 1432654 56 Mollivirus(16.67%) protease,transposase NA
DBSCAN-SWA_12 1637816 : 1707468 55 Staphylococcus_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_13 1718964 : 1847940 117 Klosneuvirus(18.75%) protease,tRNA,transposase NA
DBSCAN-SWA_14 1863218 : 1928039 54 Lake_Baikal_phage(18.18%) protease,tRNA,transposase NA
DBSCAN-SWA_15 2005919 : 2081538 60 Bacillus_virus(12.5%) protease,transposase NA
DBSCAN-SWA_16 2229241 : 2290589 52 Yellowstone_lake_phycodnavirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_17 2311380 : 2382534 55 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_18 2466736 : 2517908 48 Salmonella_phage(20.0%) tRNA,transposase NA
DBSCAN-SWA_19 2616203 : 2656872 42 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_20 2712337 : 2785207 58 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_21 2788350 : 2855160 49 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_22 2885546 : 2930286 40 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_23 3310232 : 3363973 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_24 3370128 : 3429428 48 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_25 3444366 : 3503488 48 Planktothrix_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_26 3513288 : 3584629 59 Paramecium_bursaria_Chlorella_virus(20.0%) tRNA,transposase NA
DBSCAN-SWA_27 3654451 : 3708646 53 Paramecium_bursaria_Chlorella_virus(14.29%) protease,transposase NA
DBSCAN-SWA_28 3719262 : 3781200 52 uncultured_Caudovirales_phage(33.33%) tRNA,transposase,protease NA
DBSCAN-SWA_29 3811583 : 3879409 58 Bacillus_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_30 4028567 : 4081999 45 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage