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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011197 Bordetella pertussis strain H812 chromosome, complete genome 5 crisprs cas3,csa3,DEDDh,DinG 0 0 26 0

Results visualization

1. NZ_CP011197
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011197_1 644872-644981 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011197_2 2144844-2144971 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011197_3 2929522-2929638 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011197_4 3644401-3644494 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011197_5 3825853-3825937 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 232666 : 307010 56 uncultured_Mediterranean_phage(15.38%) transposase NA
DBSCAN-SWA_3 489374 : 607269 101 Acinetobacter_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_4 611683 : 675516 47 Pandoravirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_5 694427 : 771736 59 Bacillus_phage(20.0%) tRNA,integrase,protease,transposase attL 741564:741582|attR 761452:761470
DBSCAN-SWA_6 1027075 : 1120063 86 Bacillus_virus(30.0%) transposase NA
DBSCAN-SWA_7 1150449 : 1221421 53 uncultured_Mediterranean_phage(25.0%) protease,transposase NA
DBSCAN-SWA_8 1268815 : 1349690 59 Bacillus_virus(25.0%) tRNA,transposase NA
DBSCAN-SWA_9 1469081 : 1521234 45 Salmonella_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_10 1565159 : 1633245 57 Streptococcus_virus(11.11%) tRNA,transposase NA
DBSCAN-SWA_11 1669194 : 1724785 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_12 1929218 : 2000736 59 Faecalibacterium_phage(12.5%) protease,transposase NA
DBSCAN-SWA_13 2047053 : 2095068 42 Moraxella_phage(18.18%) tRNA,transposase NA
DBSCAN-SWA_14 2156630 : 2215900 51 Klosneuvirus(40.0%) tRNA,protease,transposase NA
DBSCAN-SWA_15 2226140 : 2270463 45 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_16 2300236 : 2364605 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_17 2529066 : 2587310 54 Planktothrix_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_18 2629588 : 2696088 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_19 2878491 : 3016970 107 uncultured_Mediterranean_phage(17.65%) tRNA,holin,transposase NA
DBSCAN-SWA_20 3028246 : 3099562 57 Xanthomonas_phage(14.29%) transposase NA
DBSCAN-SWA_21 3118984 : 3174114 48 Bacillus_phage(28.57%) transposase NA
DBSCAN-SWA_22 3255174 : 3324177 55 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_23 3339623 : 3439736 108 uncultured_Caudovirales_phage(14.29%) tRNA,protease,transposase,terminase,tail NA
DBSCAN-SWA_24 3600405 : 3655379 44 Lake_Baikal_phage(20.0%) transposase NA
DBSCAN-SWA_25 3745192 : 3860862 100 Bacillus_phage(12.5%) protease,tRNA,transposase NA
DBSCAN-SWA_26 4005569 : 4070481 60 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage