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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011198 Bordetella pertussis strain I228 chromosome, complete genome 5 crisprs DEDDh,csa3,cas3,DinG 0 0 26 0

Results visualization

1. NZ_CP011198
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011198_1 250590-250674 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011198_2 624001-624110 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011198_3 1842056-1842183 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011198_4 2910762-2910878 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011198_5 3627631-3627724 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164892 : 225403 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) transposase,protease,tRNA NA
DBSCAN-SWA_4 233335 : 286925 47 Bacillus_phage(25.0%) transposase,protease,tRNA NA
DBSCAN-SWA_5 555311 : 614611 48 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_6 620766 : 674507 48 Salmonella_phage(33.33%) transposase NA
DBSCAN-SWA_7 723445 : 764446 29 Mycobacterium_phage(50.0%) transposase,protease,tRNA NA
DBSCAN-SWA_8 774373 : 821991 47 Bovine_alphaherpesvirus(10.0%) transposase,holin,protease,tRNA NA
DBSCAN-SWA_9 1006207 : 1100244 88 Bacillus_virus(30.0%) transposase NA
DBSCAN-SWA_10 1130630 : 1201601 53 uncultured_Mediterranean_phage(25.0%) transposase,protease NA
DBSCAN-SWA_11 1248995 : 1329870 59 Bacillus_virus(25.0%) transposase,tRNA NA
DBSCAN-SWA_12 1744265 : 1792280 42 Moraxella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_13 1853842 : 1913112 51 Klosneuvirus(40.0%) transposase,protease,tRNA NA
DBSCAN-SWA_14 1923352 : 1980849 57 Staphylococcus_phage(16.67%) transposase NA
DBSCAN-SWA_15 1996405 : 2060774 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_16 2247242 : 2308590 52 Yellowstone_lake_phycodnavirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_17 2329381 : 2400535 55 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_18 2497412 : 2556193 50 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_19 2609779 : 2676279 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_20 2875667 : 2948992 53 Catovirus(22.22%) transposase,protease,tRNA NA
DBSCAN-SWA_21 2960717 : 3011379 42 uncultured_Mediterranean_phage(50.0%) transposase,holin,tRNA NA
DBSCAN-SWA_22 3032330 : 3104824 58 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_23 3118331 : 3171849 44 Bacillus_phage(33.33%) transposase,holin NA
DBSCAN-SWA_24 3236307 : 3306359 55 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_25 3309567 : 3414919 110 uncultured_Caudovirales_phage(14.29%) transposase,tRNA,protease,tail,terminase NA
DBSCAN-SWA_26 4033823 : 4087255 46 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage