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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011200 Bordetella pertussis strain I373 chromosome, complete genome 4 crisprs cas3,csa3,DEDDh,DinG 0 0 31 0

Results visualization

1. NZ_CP011200
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011200_1 644871-644980 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011200_2 2928975-2929091 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011200_3 3643854-3643947 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011200_4 3825306-3825390 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 232666 : 307010 54 uncultured_Mediterranean_phage(15.38%) transposase NA
DBSCAN-SWA_3 489373 : 607268 102 Acinetobacter_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_4 611682 : 675515 47 Pandoravirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_5 694426 : 771735 57 Bacillus_phage(20.0%) integrase,tRNA,transposase,protease attL 741563:741581|attR 761451:761469
DBSCAN-SWA_6 1018718 : 1120062 92 Bacillus_virus(27.27%) tRNA,transposase NA
DBSCAN-SWA_7 1150448 : 1221419 52 uncultured_Mediterranean_phage(25.0%) transposase,protease NA
DBSCAN-SWA_8 1268813 : 1349688 58 Bacillus_virus(25.0%) tRNA,transposase NA
DBSCAN-SWA_9 1468533 : 1520686 45 Salmonella_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_10 1564611 : 1632697 59 Streptococcus_virus(11.11%) tRNA,transposase NA
DBSCAN-SWA_11 1668646 : 1724237 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_12 1745895 : 1837866 60 Moraxella_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_13 1958051 : 2027703 55 Staphylococcus_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_14 2039199 : 2088595 45 Erysipelothrix_phage(16.67%) transposase NA
DBSCAN-SWA_15 2099799 : 2140490 37 Klosneuvirus(25.0%) tRNA,transposase,protease NA
DBSCAN-SWA_16 2168273 : 2233822 58 Lake_Baikal_phage(20.0%) tRNA,transposase,protease NA
DBSCAN-SWA_17 2319999 : 2383577 48 uncultured_Caudovirales_phage(11.11%) transposase,protease NA
DBSCAN-SWA_18 2528518 : 2586762 53 Planktothrix_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_19 2629041 : 2695541 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_20 2893880 : 2967205 52 Catovirus(22.22%) tRNA,transposase,protease NA
DBSCAN-SWA_21 2978930 : 3028650 43 uncultured_Mediterranean_phage(60.0%) holin,tRNA,transposase NA
DBSCAN-SWA_22 3036860 : 3099015 46 Erysipelothrix_phage(20.0%) transposase NA
DBSCAN-SWA_23 3118437 : 3173567 48 Bacillus_phage(28.57%) transposase NA
DBSCAN-SWA_24 3189152 : 3261165 60 Leptospira_phage(20.0%) holin,transposase NA
DBSCAN-SWA_25 3312758 : 3355665 34 Planktothrix_phage(50.0%) transposase NA
DBSCAN-SWA_26 3364957 : 3397640 41 uncultured_Caudovirales_phage(21.05%) tail,tRNA,terminase,transposase NA
DBSCAN-SWA_27 3408859 : 3455178 44 Bacillus_phage(40.0%) tRNA,transposase,protease NA
DBSCAN-SWA_28 3599858 : 3654832 44 Lake_Baikal_phage(20.0%) transposase NA
DBSCAN-SWA_29 3744645 : 3798840 53 Paramecium_bursaria_Chlorella_virus(14.29%) transposase,protease NA
DBSCAN-SWA_30 3809456 : 3870345 51 uncultured_Caudovirales_phage(33.33%) tRNA,transposase,protease NA
DBSCAN-SWA_31 4028125 : 4081557 45 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage