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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011202 Bordetella pertussis strain I602 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 30 0

Results visualization

1. NZ_CP011202
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011202_1 251640-251724 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011202_2 433083-433176 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011202_3 996351-996445 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011202_4 1820857-1820984 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011202_5 3433533-3433642 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164893 : 219510 47 Diachasmimorpha_longicaudata_entomopoxvirus(14.29%) tRNA,protease,transposase NA
DBSCAN-SWA_4 225502 : 287973 54 Bacillus_phage(25.0%) tRNA,protease,transposase NA
DBSCAN-SWA_5 391906 : 449415 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 590420 : 651610 56 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_7 656934 : 703125 51 uncultured_Caudovirales_phage(18.18%) tRNA,tail,transposase,terminase NA
DBSCAN-SWA_8 709291 : 763221 46 Planktothrix_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_9 885810 : 953786 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_10 997315 : 1069832 60 Enterococcus_phage(14.29%) tRNA,transposase NA
DBSCAN-SWA_11 1073585 : 1135661 53 Catovirus(20.0%) tRNA,holin,transposase NA
DBSCAN-SWA_12 1153231 : 1219750 54 Erysipelothrix_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_13 1270678 : 1327888 49 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_14 1419170 : 1471323 45 Salmonella_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_15 1515248 : 1583336 57 Streptococcus_virus(11.11%) tRNA,transposase NA
DBSCAN-SWA_16 1619285 : 1674876 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_17 1832643 : 1891913 51 Klosneuvirus(40.0%) tRNA,protease,transposase NA
DBSCAN-SWA_18 1902153 : 1946476 45 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_19 1976249 : 2040618 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_20 2172147 : 2221800 43 Synechococcus_phage(15.38%) tRNA,transposase NA
DBSCAN-SWA_21 2478111 : 2536355 54 Planktothrix_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_22 2578632 : 2645132 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_23 2673247 : 2710659 39 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_24 2809786 : 2864303 48 Diachasmimorpha_longicaudata_entomopoxvirus(20.0%) transposase NA
DBSCAN-SWA_25 2872328 : 2929114 41 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_26 2959500 : 3003191 41 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_27 3383135 : 3436876 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_28 3443031 : 3502329 47 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_29 3517267 : 3575340 47 Planktothrix_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_30 4007552 : 4072464 60 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage