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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP012081 Bordetella pertussis strain I351 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 28 0

Results visualization

1. NZ_CP012081
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012081_1 250609-250693 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012081_2 432052-432145 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012081_3 996354-996448 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012081_4 1894113-1894240 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012081_5 3432749-3432858 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27288 : 70042 42 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 77640 : 136114 53 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164898 : 225421 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,tRNA,transposase NA
DBSCAN-SWA_4 233354 : 286942 47 Bacillus_phage(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_5 390875 : 448384 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 590438 : 651628 55 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_7 656952 : 703143 50 uncultured_Caudovirales_phage(18.18%) terminase,tail,tRNA,transposase NA
DBSCAN-SWA_8 709309 : 763239 46 Planktothrix_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_9 885828 : 957545 57 Bacillus_phage(25.0%) transposase NA
DBSCAN-SWA_10 976967 : 1048283 57 Streptococcus_phage(14.29%) transposase NA
DBSCAN-SWA_11 1060501 : 1118164 48 uncultured_Mediterranean_phage(37.5%) holin,tRNA,transposase NA
DBSCAN-SWA_12 1125846 : 1199263 52 Catovirus(25.0%) tRNA,transposase NA
DBSCAN-SWA_13 1319286 : 1387773 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_14 1448264 : 1503752 56 Mollivirus(16.67%) protease,transposase NA
DBSCAN-SWA_15 1796322 : 1844337 42 Moraxella_phage(18.18%) tRNA,transposase NA
DBSCAN-SWA_16 1905899 : 1965169 51 Klosneuvirus(40.0%) protease,tRNA,transposase NA
DBSCAN-SWA_17 1975409 : 2019732 44 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_18 2049505 : 2113874 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_19 2300342 : 2361690 52 Yellowstone_lake_phycodnavirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_20 2382481 : 2453635 54 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_21 2538884 : 2601185 54 Salmonella_phage(18.18%) tRNA,transposase NA
DBSCAN-SWA_22 2687302 : 2755038 57 Salmonella_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_23 2783405 : 2856275 58 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_24 2859418 : 2926230 49 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_25 2956616 : 3000307 39 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_26 3381302 : 3501547 99 Acinetobacter_phage(20.0%) tRNA,transposase NA
DBSCAN-SWA_27 3516485 : 3575607 48 Planktothrix_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_28 4007820 : 4072732 59 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage