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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP012130 Bordetella pertussis strain H639 chromosome, complete genome 4 crisprs cas3,DinG,csa3,DEDDh 0 0 30 0

Results visualization

1. NZ_CP012130
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012130_1 469016-469109 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012130_2 1032285-1032379 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012130_3 3451778-3451887 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012130_4 3824162-3824246 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 63965 57 Natrialba_phage(11.11%) transposase,tRNA NA
DBSCAN-SWA_2 248776 : 323120 54 uncultured_Mediterranean_phage(15.38%) transposase NA
DBSCAN-SWA_3 626353 : 687544 55 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_4 692868 : 739059 50 uncultured_Caudovirales_phage(18.18%) tail,terminase,transposase,tRNA NA
DBSCAN-SWA_5 745225 : 799155 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_6 921744 : 989720 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_7 1033249 : 1105766 60 Enterococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_8 1109519 : 1170546 52 Catovirus(20.0%) transposase,holin,tRNA NA
DBSCAN-SWA_9 1188116 : 1253699 52 Erysipelothrix_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_10 1352835 : 1421322 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_11 1481813 : 1537300 56 Mollivirus(16.67%) protease,transposase NA
DBSCAN-SWA_12 1632002 : 1700088 57 Streptococcus_virus(11.11%) transposase,tRNA NA
DBSCAN-SWA_13 1736037 : 1791628 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_14 2024391 : 2094043 55 Staphylococcus_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_15 2105539 : 2154935 45 Erysipelothrix_phage(16.67%) transposase NA
DBSCAN-SWA_16 2166139 : 2234515 59 Klosneuvirus(22.22%) protease,transposase,tRNA NA
DBSCAN-SWA_17 2249793 : 2314614 54 Lake_Baikal_phage(18.18%) protease,transposase,tRNA NA
DBSCAN-SWA_18 2567973 : 2633694 59 Salmonella_phage(15.38%) protease,transposase,tRNA NA
DBSCAN-SWA_19 2719811 : 2760480 42 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_20 2815945 : 2888815 58 Moraxella_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_21 2891958 : 2958770 49 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_22 2989156 : 3029394 37 Planktothrix_phage(50.0%) transposase NA
DBSCAN-SWA_23 3401380 : 3455121 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_24 3461276 : 3520576 47 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_25 3535514 : 3593587 47 Planktothrix_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_26 3603387 : 3674728 59 Paramecium_bursaria_Chlorella_virus(20.0%) transposase,tRNA NA
DBSCAN-SWA_27 3744550 : 3796689 50 Paramecium_bursaria_Chlorella_virus(14.29%) protease,transposase NA
DBSCAN-SWA_28 3808312 : 3869201 51 uncultured_Caudovirales_phage(33.33%) protease,transposase,tRNA NA
DBSCAN-SWA_29 3899584 : 3967407 58 Bacillus_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_30 3995230 : 4052678 48 uncultured_Mediterranean_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage