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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP012131 Bordetella pertussis strain I150 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 30 0

Results visualization

1. NZ_CP012131
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012131_1 250590-250674 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012131_2 432033-432126 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012131_3 995302-995396 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012131_4 1818756-1818883 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012131_5 3432479-3432588 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164892 : 225403 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) transposase,tRNA,protease NA
DBSCAN-SWA_4 233335 : 286923 48 Bacillus_phage(25.0%) transposase,tRNA,protease NA
DBSCAN-SWA_5 390856 : 448365 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 589370 : 650561 56 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_7 655885 : 702076 51 uncultured_Caudovirales_phage(18.18%) transposase,terminase,tRNA,tail NA
DBSCAN-SWA_8 708242 : 762172 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_9 853050 : 902314 40 Vibrio_phage(33.33%) transposase,holin NA
DBSCAN-SWA_10 911926 : 976866 58 Bacillus_phage(18.18%) transposase NA
DBSCAN-SWA_11 996266 : 1059417 54 Enterococcus_phage(16.67%) transposase NA
DBSCAN-SWA_12 1065401 : 1125464 50 uncultured_Mediterranean_phage(37.5%) transposase,tRNA,holin,protease NA
DBSCAN-SWA_13 1156530 : 1218701 50 Erysipelothrix_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_14 1269629 : 1326840 49 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_15 1417073 : 1469226 46 Salmonella_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_16 1513151 : 1581235 59 Streptococcus_virus(11.11%) transposase,tRNA NA
DBSCAN-SWA_17 1617184 : 1672775 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_18 1830542 : 1889812 51 Klosneuvirus(40.0%) transposase,tRNA,protease NA
DBSCAN-SWA_19 1900052 : 1944375 45 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_20 1974148 : 2038517 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_21 2170046 : 2219699 43 Synechococcus_phage(15.38%) transposase,tRNA NA
DBSCAN-SWA_22 2476006 : 2534250 54 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_23 2576528 : 2643028 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_24 2671143 : 2708555 39 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_25 2807682 : 2928059 97 Agrobacterium_phage(16.67%) transposase,protease NA
DBSCAN-SWA_26 2958445 : 3002136 41 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_27 3382081 : 3435822 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_28 3441977 : 3501275 48 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_29 3516213 : 3574286 47 Planktothrix_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_30 4029601 : 4083033 46 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage