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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP012134 Bordetella pertussis strain I464 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 29 0

Results visualization

1. NZ_CP012134
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012134_1 250591-250675 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012134_2 432034-432127 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012134_3 995302-995396 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012134_4 1819806-1819933 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012134_5 3432482-3432591 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164893 : 225404 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,transposase,tRNA NA
DBSCAN-SWA_4 233336 : 286924 47 Bacillus_phage(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_5 390857 : 448366 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 589371 : 650561 56 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_7 655885 : 702076 51 uncultured_Caudovirales_phage(18.18%) transposase,terminase,tRNA,tail NA
DBSCAN-SWA_8 708242 : 762172 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_9 884761 : 952737 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_10 996266 : 1068783 60 Enterococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_11 1072536 : 1134612 53 Catovirus(20.0%) holin,transposase,tRNA NA
DBSCAN-SWA_12 1152182 : 1218701 54 Erysipelothrix_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_13 1269628 : 1326839 49 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_14 1382333 : 1438739 51 Enterococcus_phage(16.67%) transposase NA
DBSCAN-SWA_15 1514199 : 1582285 57 Streptococcus_virus(11.11%) transposase,tRNA NA
DBSCAN-SWA_16 1618234 : 1673825 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_17 1831592 : 1890862 51 Klosneuvirus(40.0%) protease,transposase,tRNA NA
DBSCAN-SWA_18 1901102 : 1945425 45 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_19 1975198 : 2039567 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_20 2171096 : 2220749 43 Synechococcus_phage(15.38%) transposase,tRNA NA
DBSCAN-SWA_21 2577580 : 2644080 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_22 2672195 : 2709607 39 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_23 2808734 : 2863251 48 Diachasmimorpha_longicaudata_entomopoxvirus(20.0%) transposase NA
DBSCAN-SWA_24 2871276 : 2928062 41 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_25 2958448 : 3002139 41 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_26 3382084 : 3435825 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_27 3441980 : 3501278 47 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_28 3516216 : 3574289 47 Planktothrix_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_29 4006501 : 4071413 60 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage