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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP019565 Staphylococcus aureus strain SR434 plasmid pSR02, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP019564 Staphylococcus aureus strain SR434 plasmid pSR01, complete sequence 0 crisprs csa3 0 0 0 0
NZ_CP019567 Staphylococcus aureus strain SR434 plasmid pSR04, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP019563 Staphylococcus aureus strain SR434 chromosome, complete genome 9 crisprs csa3,cas3,DinG,DEDDh,WYL 7 3 13 0
NZ_CP019566 Staphylococcus aureus strain SR434 plasmid pSR03, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP019563
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019563_1 923262-923346 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019563_2 1133398-1133476 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019563_3 1805870-1806060 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019563_4 2123579-2123752 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019563_5 2318038-2318170 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019563_6 2321624-2321734 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019563_7 2374575-2374659 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019563_8 2668620-2668705 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019563_9 2680945-2681026 Orphan NA
1 spacers
csa3

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP019563_4 4.1|2123632|17|NZ_CP019563|PILER-CR 2123632-2123648 17 NZ_CP019563.1 1241316-1241332 0 1.0
NZ_CP019563_4 4.1|2123632|17|NZ_CP019563|PILER-CR 2123632-2123648 17 NZ_CP019563.1 1806072-1806088 0 1.0
NZ_CP019563_4 4.2|2123702|16|NZ_CP019563|PILER-CR 2123702-2123717 16 NZ_CP019563.1 109008-109023 0 1.0
NZ_CP019563_4 4.2|2123702|16|NZ_CP019563|PILER-CR 2123702-2123717 16 NZ_CP019563.1 109064-109079 0 1.0
NZ_CP019563_4 4.2|2123702|16|NZ_CP019563|PILER-CR 2123702-2123717 16 NZ_CP019563.1 426065-426080 0 1.0
NZ_CP019563_4 4.2|2123702|16|NZ_CP019563|PILER-CR 2123702-2123717 16 NZ_CP019563.1 440727-440742 0 1.0
NZ_CP019563_4 4.2|2123702|16|NZ_CP019563|PILER-CR 2123702-2123717 16 NZ_CP019563.1 705079-705094 0 1.0
NZ_CP019563_4 4.2|2123702|16|NZ_CP019563|PILER-CR 2123702-2123717 16 NZ_CP019563.1 709477-709492 0 1.0
NZ_CP019563_4 4.2|2123702|16|NZ_CP019563|PILER-CR 2123702-2123717 16 NZ_CP019563.1 835351-835366 0 1.0
NZ_CP019563_4 4.2|2123702|16|NZ_CP019563|PILER-CR 2123702-2123717 16 NZ_CP019563.1 835407-835422 0 1.0
NZ_CP019563_4 4.2|2123702|16|NZ_CP019563|PILER-CR 2123702-2123717 16 NZ_CP019563.1 919282-919297 0 1.0
NZ_CP019563_4 4.2|2123702|16|NZ_CP019563|PILER-CR 2123702-2123717 16 NZ_CP019563.1 919395-919410 0 1.0
NZ_CP019563_4 4.2|2123702|16|NZ_CP019563|PILER-CR 2123702-2123717 16 NZ_CP019563.1 1133375-1133390 0 1.0
NZ_CP019563_4 4.2|2123702|16|NZ_CP019563|PILER-CR 2123702-2123717 16 NZ_CP019563.1 1182353-1182368 0 1.0
NZ_CP019563_4 4.2|2123702|16|NZ_CP019563|PILER-CR 2123702-2123717 16 NZ_CP019563.1 1721526-1721541 0 1.0
NZ_CP019563_4 4.2|2123702|16|NZ_CP019563|PILER-CR 2123702-2123717 16 NZ_CP019563.1 1721584-1721599 0 1.0
NZ_CP019563_7 7.1|2374602|31|NZ_CP019563|CRISPRCasFinder 2374602-2374632 31 NZ_CP019563.1 1182295-1182325 0 1.0
NZ_CP019563_3 3.1|1805895|30|NZ_CP019563|CRT 1805895-1805924 30 NZ_CP019563.1 1806061-1806090 1 0.967
NZ_CP019563_3 3.2|1805950|31|NZ_CP019563|CRT 1805950-1805980 31 NZ_CP019563.1 426067-426097 1 0.968
NZ_CP019563_3 3.2|1805950|31|NZ_CP019563|CRT 1805950-1805980 31 NZ_CP019563.1 835353-835383 1 0.968
NZ_CP019563_3 3.2|1805950|31|NZ_CP019563|CRT 1805950-1805980 31 NZ_CP019563.1 835409-835439 1 0.968
NZ_CP019563_3 3.2|1805950|31|NZ_CP019563|CRT 1805950-1805980 31 NZ_CP019563.1 919284-919314 1 0.968
NZ_CP019563_3 3.3|1806006|30|NZ_CP019563|CRT 1806006-1806035 30 NZ_CP019563.1 118455-118484 1 0.967
NZ_CP019563_3 3.3|1806006|30|NZ_CP019563|CRT 1806006-1806035 30 NZ_CP019563.1 426125-426154 1 0.967
NZ_CP019563_3 3.3|1806006|30|NZ_CP019563|CRT 1806006-1806035 30 NZ_CP019563.1 440652-440681 1 0.967
NZ_CP019563_3 3.3|1806006|30|NZ_CP019563|CRT 1806006-1806035 30 NZ_CP019563.1 709538-709567 1 0.967
NZ_CP019563_3 3.3|1806006|30|NZ_CP019563|CRT 1806006-1806035 30 NZ_CP019563.1 835581-835610 1 0.967
NZ_CP019563_3 3.3|1806006|30|NZ_CP019563|CRT 1806006-1806035 30 NZ_CP019563.1 1113221-1113250 1 0.967
NZ_CP019563_3 3.3|1806006|30|NZ_CP019563|CRT 1806006-1806035 30 NZ_CP019563.1 1925065-1925094 1 0.967
NZ_CP019563_3 3.3|1806006|30|NZ_CP019563|CRT 1806006-1806035 30 NZ_CP019563.1 1925123-1925152 1 0.967
NZ_CP019563_4 4.2|2123702|16|NZ_CP019563|PILER-CR 2123702-2123717 16 NZ_CP019563.1 119814-119829 1 0.938
NZ_CP019563_4 4.2|2123702|16|NZ_CP019563|PILER-CR 2123702-2123717 16 NZ_CP019563.1 663429-663444 1 0.938
NZ_CP019563_4 4.2|2123702|16|NZ_CP019563|PILER-CR 2123702-2123717 16 NZ_CP019563.1 923251-923266 1 0.938
NZ_CP019563_4 4.2|2123702|16|NZ_CP019563|PILER-CR 2123702-2123717 16 NZ_CP019563.1 1235895-1235910 1 0.938
NZ_CP019563_4 4.2|2123702|16|NZ_CP019563|PILER-CR 2123702-2123717 16 NZ_CP019563.1 2288024-2288039 1 0.938
NZ_CP019563_4 4.2|2123702|16|NZ_CP019563|PILER-CR 2123702-2123717 16 NZ_CP019563.1 2476798-2476813 1 0.938
NZ_CP019563_7 7.1|2374602|31|NZ_CP019563|CRISPRCasFinder 2374602-2374632 31 NZ_CP019563.1 923464-923494 1 0.968
NZ_CP019563_7 7.1|2374602|31|NZ_CP019563|CRISPRCasFinder 2374602-2374632 31 NZ_CP019563.1 1241273-1241303 1 0.968
NZ_CP019563_7 7.1|2374602|31|NZ_CP019563|CRISPRCasFinder 2374602-2374632 31 NZ_CP019563.1 1925107-1925137 1 0.968
NZ_CP019563_7 7.1|2374602|31|NZ_CP019563|CRISPRCasFinder 2374602-2374632 31 NZ_CP019563.1 2374544-2374574 1 0.968
NZ_CP019563_2 2.1|1133421|33|NZ_CP019563|CRISPRCasFinder 1133421-1133453 33 NZ_CP019563.1 1182346-1182378 2 0.939
NZ_CP019563_7 7.1|2374602|31|NZ_CP019563|CRISPRCasFinder 2374602-2374632 31 NZ_CP019563.1 118470-118500 2 0.935
NZ_CP019563_7 7.1|2374602|31|NZ_CP019563|CRISPRCasFinder 2374602-2374632 31 NZ_CP019563.1 440667-440697 2 0.935
NZ_CP019563_7 7.1|2374602|31|NZ_CP019563|CRISPRCasFinder 2374602-2374632 31 NZ_CP019563.1 709522-709552 2 0.935
NZ_CP019563_7 7.1|2374602|31|NZ_CP019563|CRISPRCasFinder 2374602-2374632 31 NZ_CP019563.1 835565-835595 2 0.935
NZ_CP019563_7 7.1|2374602|31|NZ_CP019563|CRISPRCasFinder 2374602-2374632 31 NZ_CP019563.1 993810-993840 2 0.935

1. spacer 4.1|2123632|17|NZ_CP019563|PILER-CR matches to position: 1241316-1241332, mismatch: 0, identity: 1.0

aagaatttcgaaaagaa	CRISPR spacer
aagaatttcgaaaagaa	Protospacer
*****************

2. spacer 4.1|2123632|17|NZ_CP019563|PILER-CR matches to position: 1806072-1806088, mismatch: 0, identity: 1.0

aagaatttcgaaaagaa	CRISPR spacer
aagaatttcgaaaagaa	Protospacer
*****************

3. spacer 4.2|2123702|16|NZ_CP019563|PILER-CR matches to position: 109008-109023, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

4. spacer 4.2|2123702|16|NZ_CP019563|PILER-CR matches to position: 109064-109079, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

5. spacer 4.2|2123702|16|NZ_CP019563|PILER-CR matches to position: 426065-426080, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

6. spacer 4.2|2123702|16|NZ_CP019563|PILER-CR matches to position: 440727-440742, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

7. spacer 4.2|2123702|16|NZ_CP019563|PILER-CR matches to position: 705079-705094, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

8. spacer 4.2|2123702|16|NZ_CP019563|PILER-CR matches to position: 709477-709492, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

9. spacer 4.2|2123702|16|NZ_CP019563|PILER-CR matches to position: 835351-835366, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

10. spacer 4.2|2123702|16|NZ_CP019563|PILER-CR matches to position: 835407-835422, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

11. spacer 4.2|2123702|16|NZ_CP019563|PILER-CR matches to position: 919282-919297, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

12. spacer 4.2|2123702|16|NZ_CP019563|PILER-CR matches to position: 919395-919410, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

13. spacer 4.2|2123702|16|NZ_CP019563|PILER-CR matches to position: 1133375-1133390, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

14. spacer 4.2|2123702|16|NZ_CP019563|PILER-CR matches to position: 1182353-1182368, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

15. spacer 4.2|2123702|16|NZ_CP019563|PILER-CR matches to position: 1721526-1721541, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

16. spacer 4.2|2123702|16|NZ_CP019563|PILER-CR matches to position: 1721584-1721599, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

17. spacer 7.1|2374602|31|NZ_CP019563|CRISPRCasFinder matches to position: 1182295-1182325, mismatch: 0, identity: 1.0

caccccaacttgcattgtctgtagaatttct	CRISPR spacer
caccccaacttgcattgtctgtagaatttct	Protospacer
*******************************

18. spacer 3.1|1805895|30|NZ_CP019563|CRT matches to position: 1806061-1806090, mismatch: 1, identity: 0.967

acctgtagaatttcttttcgaaattctctg	CRISPR spacer
acctgtagaatttcttttcgaaattctttg	Protospacer
***************************.**

19. spacer 3.2|1805950|31|NZ_CP019563|CRT matches to position: 426067-426097, mismatch: 1, identity: 0.968

ttattgtatgctgactttccgccagcttcta	CRISPR spacer
ttattgtaagctgactttccgccagcttcta	Protospacer
******** **********************

20. spacer 3.2|1805950|31|NZ_CP019563|CRT matches to position: 835353-835383, mismatch: 1, identity: 0.968

ttattgtatgctgactttccgccagcttcta	CRISPR spacer
ttattgtaagctgactttccgccagcttcta	Protospacer
******** **********************

21. spacer 3.2|1805950|31|NZ_CP019563|CRT matches to position: 835409-835439, mismatch: 1, identity: 0.968

ttattgtatgctgactttccgccagcttcta	CRISPR spacer
ttattgtaagctgactttccgccagcttcta	Protospacer
******** **********************

22. spacer 3.2|1805950|31|NZ_CP019563|CRT matches to position: 919284-919314, mismatch: 1, identity: 0.968

ttattgtatgctgactttccgccagcttcta	CRISPR spacer
ttattgtaagctgactttccgccagcttcta	Protospacer
******** **********************

23. spacer 3.3|1806006|30|NZ_CP019563|CRT matches to position: 118455-118484, mismatch: 1, identity: 0.967

gcctgtagaatttcttttcgaatttctctg	CRISPR spacer
gcctgtagaatttcttttcgaaattctctg	Protospacer
********************** *******

24. spacer 3.3|1806006|30|NZ_CP019563|CRT matches to position: 426125-426154, mismatch: 1, identity: 0.967

gcctgtagaatttcttttcgaatttctctg	CRISPR spacer
gcctgtagaatttcttttcgaaattctctg	Protospacer
********************** *******

25. spacer 3.3|1806006|30|NZ_CP019563|CRT matches to position: 440652-440681, mismatch: 1, identity: 0.967

gcctgtagaatttcttttcgaatttctctg	CRISPR spacer
gcctgtagaatttcttttcgaaattctctg	Protospacer
********************** *******

26. spacer 3.3|1806006|30|NZ_CP019563|CRT matches to position: 709538-709567, mismatch: 1, identity: 0.967

gcctgtagaatttcttttcgaatttctctg	CRISPR spacer
gcctgtagaatttcttttcgaaattctctg	Protospacer
********************** *******

27. spacer 3.3|1806006|30|NZ_CP019563|CRT matches to position: 835581-835610, mismatch: 1, identity: 0.967

gcctgtagaatttcttttcgaatttctctg	CRISPR spacer
gcctgtagaatttcttttcgaaattctctg	Protospacer
********************** *******

28. spacer 3.3|1806006|30|NZ_CP019563|CRT matches to position: 1113221-1113250, mismatch: 1, identity: 0.967

gcctgtagaatttcttttcgaatttctctg	CRISPR spacer
gcctgtagaatttcttttcgaaattctctg	Protospacer
********************** *******

29. spacer 3.3|1806006|30|NZ_CP019563|CRT matches to position: 1925065-1925094, mismatch: 1, identity: 0.967

gcctgtagaatttcttttcgaatttctctg	CRISPR spacer
gcctgtagaatttcttttcgaaattctctg	Protospacer
********************** *******

30. spacer 3.3|1806006|30|NZ_CP019563|CRT matches to position: 1925123-1925152, mismatch: 1, identity: 0.967

gcctgtagaatttcttttcgaatttctctg	CRISPR spacer
gcctgtagaatttcttttcgaaattctctg	Protospacer
********************** *******

31. spacer 4.2|2123702|16|NZ_CP019563|PILER-CR matches to position: 119814-119829, mismatch: 1, identity: 0.938

tcagcttacaataatg	CRISPR spacer
tcagcttacgataatg	Protospacer
*********.******

32. spacer 4.2|2123702|16|NZ_CP019563|PILER-CR matches to position: 663429-663444, mismatch: 1, identity: 0.938

tcagcttacaataatg	CRISPR spacer
tcagcttacaacaatg	Protospacer
***********.****

33. spacer 4.2|2123702|16|NZ_CP019563|PILER-CR matches to position: 923251-923266, mismatch: 1, identity: 0.938

tcagcttacaataatg	CRISPR spacer
tcagcttacaaaaatg	Protospacer
*********** ****

34. spacer 4.2|2123702|16|NZ_CP019563|PILER-CR matches to position: 1235895-1235910, mismatch: 1, identity: 0.938

tcagcttacaataatg	CRISPR spacer
tcagcttacgataatg	Protospacer
*********.******

35. spacer 4.2|2123702|16|NZ_CP019563|PILER-CR matches to position: 2288024-2288039, mismatch: 1, identity: 0.938

tcagcttacaataatg	CRISPR spacer
tcagcttacgataatg	Protospacer
*********.******

36. spacer 4.2|2123702|16|NZ_CP019563|PILER-CR matches to position: 2476798-2476813, mismatch: 1, identity: 0.938

tcagcttacaataatg	CRISPR spacer
tcagcttacaacaatg	Protospacer
***********.****

37. spacer 7.1|2374602|31|NZ_CP019563|CRISPRCasFinder matches to position: 923464-923494, mismatch: 1, identity: 0.968

caccccaacttgcattgtctgtagaatttct	CRISPR spacer
caccccaacttgcattgtttgtagaatttct	Protospacer
******************.************

38. spacer 7.1|2374602|31|NZ_CP019563|CRISPRCasFinder matches to position: 1241273-1241303, mismatch: 1, identity: 0.968

caccccaacttgcattgtctgtagaatttct	CRISPR spacer
caccccaacttgcattgtttgtagaatttct	Protospacer
******************.************

39. spacer 7.1|2374602|31|NZ_CP019563|CRISPRCasFinder matches to position: 1925107-1925137, mismatch: 1, identity: 0.968

caccccaacttgcattgtctgtagaatttct	CRISPR spacer
caccccaacttgcattgcctgtagaatttct	Protospacer
*****************.*************

40. spacer 7.1|2374602|31|NZ_CP019563|CRISPRCasFinder matches to position: 2374544-2374574, mismatch: 1, identity: 0.968

caccccaacttgcattgtctgtagaatttct	CRISPR spacer
caccccaacttacattgtctgtagaatttct	Protospacer
***********.*******************

41. spacer 2.1|1133421|33|NZ_CP019563|CRISPRCasFinder matches to position: 1182346-1182378, mismatch: 2, identity: 0.939

ccaacttgcacactattgtaagctgactttcca	CRISPR spacer
ccaacttgcacattattgtaagctgacttacca	Protospacer
************.**************** ***

42. spacer 7.1|2374602|31|NZ_CP019563|CRISPRCasFinder matches to position: 118470-118500, mismatch: 2, identity: 0.935

caccccaacttgcattgtctgtagaatttct	CRISPR spacer
caccccaactcgcattgcctgtagaatttct	Protospacer
**********.******.*************

43. spacer 7.1|2374602|31|NZ_CP019563|CRISPRCasFinder matches to position: 440667-440697, mismatch: 2, identity: 0.935

caccccaacttgcattgtctgtagaatttct	CRISPR spacer
caccccaacctgcattgcctgtagaatttct	Protospacer
*********.*******.*************

44. spacer 7.1|2374602|31|NZ_CP019563|CRISPRCasFinder matches to position: 709522-709552, mismatch: 2, identity: 0.935

caccccaacttgcattgtctgtagaatttct	CRISPR spacer
caccccaactcgcattgcctgtagaatttct	Protospacer
**********.******.*************

45. spacer 7.1|2374602|31|NZ_CP019563|CRISPRCasFinder matches to position: 835565-835595, mismatch: 2, identity: 0.935

caccccaacttgcattgtctgtagaatttct	CRISPR spacer
caccccaactcgcattgcctgtagaatttct	Protospacer
**********.******.*************

46. spacer 7.1|2374602|31|NZ_CP019563|CRISPRCasFinder matches to position: 993810-993840, mismatch: 2, identity: 0.935

caccccaacttgcattgtctgtagaatttct	CRISPR spacer
caccccaactcgcattgcctgtagaatttct	Protospacer
**********.******.*************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP019563_3 3.2|1805950|31|NZ_CP019563|CRT 1805950-1805980 31 NZ_CP044300 Escherichia coli strain P59A plasmid pP59A-2, complete sequence 114278-114308 7 0.774
NZ_CP019563_8 8.1|2668646|34|NZ_CP019563|CRISPRCasFinder 2668646-2668679 34 JN882286 Cronobacter phage vB_CsaP_GAP52, complete genome 23034-23067 8 0.765
NZ_CP019563_8 8.1|2668646|34|NZ_CP019563|CRISPRCasFinder 2668646-2668679 34 CP030544 Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence 7567-7600 8 0.765
NZ_CP019563_9 9.1|2680970|32|NZ_CP019563|CRISPRCasFinder 2680970-2681001 32 NC_016587 Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence 41454-41485 9 0.719
NZ_CP019563_9 9.1|2680970|32|NZ_CP019563|CRISPRCasFinder 2680970-2681001 32 NZ_CP020399 Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence 296489-296520 10 0.688

1. spacer 3.2|1805950|31|NZ_CP019563|CRT matches to NZ_CP044300 (Escherichia coli strain P59A plasmid pP59A-2, complete sequence) position: , mismatch: 7, identity: 0.774

ttattgtatgctgactttccgccagcttcta	CRISPR spacer
ttaactaatgctgaagttccgccagcttctt	Protospacer
*** .  *******  ************** 

2. spacer 8.1|2668646|34|NZ_CP019563|CRISPRCasFinder matches to JN882286 (Cronobacter phage vB_CsaP_GAP52, complete genome) position: , mismatch: 8, identity: 0.765

cccagttgcaaacaataaagctaaagatatgcaa	CRISPR spacer
agcatataaaagctataaagctaaagatatgcaa	Protospacer
  **  *. **.* ********************

3. spacer 8.1|2668646|34|NZ_CP019563|CRISPRCasFinder matches to CP030544 (Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

cccagttgcaaacaataaagctaaagatatgcaa	CRISPR spacer
tactgtttataacaataaagctaaagttattcaa	Protospacer
. * ***   **************** *** ***

4. spacer 9.1|2680970|32|NZ_CP019563|CRISPRCasFinder matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 9, identity: 0.719

aaaagtaggagcgcctgcgctaagcgcatgca	CRISPR spacer
tggaggtggagcgcctgcgcaaggcgcatgag	Protospacer
 ..**  ************* *.******* .

5. spacer 9.1|2680970|32|NZ_CP019563|CRISPRCasFinder matches to NZ_CP020399 (Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

aaaagtaggagcgcctgcgctaagcgcatgca	CRISPR spacer
tcgaagccgagcgcctgcgcgtagcgcatgcg	Protospacer
  .*.   ************  *********.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 33 : 94451 118 Staphylococcus_phage(89.66%) tail,coat,holin,integrase,protease,terminase,capsid,portal,head attL 21006:21023|attR 44552:44569
DBSCAN-SWA_2 158401 : 203862 44 Staphylococcus_phage(93.33%) tRNA,protease NA
DBSCAN-SWA_3 210416 : 242808 34 Staphylococcus_phage(93.33%) protease NA
DBSCAN-SWA_4 245969 : 258698 6 Staphylococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_5 382220 : 391263 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_6 460810 : 469122 7 Caulobacter_phage(16.67%) tRNA NA
DBSCAN-SWA_7 746382 : 752765 9 Staphylococcus_phage(83.33%) NA NA
DBSCAN-SWA_8 1010355 : 1018828 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_9 1206767 : 1211334 9 Staphylococcus_phage(50.0%) transposase,integrase attL 1202573:1202589|attR 1212197:1212213
DBSCAN-SWA_10 1269733 : 1284131 14 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_11 1296104 : 1303924 10 Pandoravirus(16.67%) NA NA
DBSCAN-SWA_12 1387522 : 1461240 103 Staphylococcus_phage(74.29%) holin,tail,integrase,terminase,capsid,portal,head,plate,tRNA,transposase attL 1382738:1382754|attR 1416196:1416212
DBSCAN-SWA_13 2803499 : 2809082 10 Staphylococcus_phage(77.78%) integrase attL 2803421:2803435|attR 2806995:2807009
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage