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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011240 Bordetella pertussis strain I075 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 29 0

Results visualization

1. NZ_CP011240
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011240_1 251640-251724 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011240_2 433083-433176 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011240_3 997356-997450 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011240_4 2174657-2174784 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011240_5 3431402-3431511 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164893 : 219510 47 Diachasmimorpha_longicaudata_entomopoxvirus(14.29%) protease,transposase,tRNA NA
DBSCAN-SWA_4 225502 : 287973 54 Bacillus_phage(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_5 391906 : 449415 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 591425 : 652616 56 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_7 657940 : 704131 51 uncultured_Caudovirales_phage(18.18%) transposase,tRNA,terminase,tail NA
DBSCAN-SWA_8 710297 : 764227 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_9 886816 : 954791 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_10 998320 : 1070837 60 Enterococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_11 1074590 : 1135617 53 Catovirus(20.0%) transposase,holin,tRNA NA
DBSCAN-SWA_12 1153187 : 1219819 54 Erysipelothrix_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_13 1318955 : 1387442 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_14 1447933 : 1503421 56 Mollivirus(16.67%) protease,transposase NA
DBSCAN-SWA_15 1598118 : 1666205 57 Streptococcus_virus(11.11%) transposase,tRNA NA
DBSCAN-SWA_16 1702154 : 1757745 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_17 2077915 : 2135194 49 Klosneuvirus(14.29%) transposase,tRNA NA
DBSCAN-SWA_18 2186443 : 2245713 51 Klosneuvirus(40.0%) protease,transposase,tRNA NA
DBSCAN-SWA_19 2255953 : 2300276 45 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_20 2330049 : 2394418 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_21 2535135 : 2600856 59 Salmonella_phage(15.38%) protease,transposase,tRNA NA
DBSCAN-SWA_22 2686973 : 2727642 42 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_23 2783107 : 2855977 58 Moraxella_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_24 2859120 : 2925931 50 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_25 2956317 : 2995506 37 Planktothrix_phage(50.0%) transposase NA
DBSCAN-SWA_26 3381004 : 3434745 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_27 3440900 : 3500200 47 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_28 3515138 : 3573211 47 Planktothrix_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_29 4005423 : 4070335 60 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage