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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011694 Bordetella pertussis strain H346 chromosome, complete genome 5 crisprs DEDDh,cas3,csa3,DinG 0 0 29 0

Results visualization

1. NZ_CP011694
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011694_1 250590-250674 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011694_2 625047-625156 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011694_3 2125032-2125159 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011694_4 2911810-2911926 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011694_5 3626587-3626680 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164892 : 225403 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) tRNA,transposase,protease NA
DBSCAN-SWA_4 233335 : 286923 48 Bacillus_phage(25.0%) tRNA,transposase,protease NA
DBSCAN-SWA_5 556357 : 615657 48 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_6 621812 : 675553 48 Salmonella_phage(33.33%) transposase NA
DBSCAN-SWA_7 724491 : 764441 30 Pseudomonas_phage(33.33%) transposase,integrase,tRNA,protease attL 721739:721757|attR 741627:741645
DBSCAN-SWA_8 774368 : 821986 47 Bovine_alphaherpesvirus(10.0%) tRNA,holin,transposase,protease NA
DBSCAN-SWA_9 1006202 : 1100239 88 Bacillus_virus(30.0%) transposase NA
DBSCAN-SWA_10 1130625 : 1201590 53 uncultured_Mediterranean_phage(25.0%) transposase,protease NA
DBSCAN-SWA_11 1242661 : 1324796 60 Bacillus_virus(25.0%) tRNA,transposase NA
DBSCAN-SWA_12 1328907 : 1370625 43 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_13 1450302 : 1502455 46 Salmonella_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_14 1546380 : 1614466 59 Streptococcus_virus(11.11%) transposase,tRNA NA
DBSCAN-SWA_15 1650433 : 1706024 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_16 1909407 : 1980924 58 Faecalibacterium_phage(12.5%) transposase,protease NA
DBSCAN-SWA_17 2027241 : 2075256 42 Moraxella_phage(18.18%) tRNA,transposase NA
DBSCAN-SWA_18 2136818 : 2196088 51 Klosneuvirus(40.0%) tRNA,transposase,protease NA
DBSCAN-SWA_19 2206328 : 2249602 45 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_20 2266928 : 2337070 60 Vibrio_phage(25.0%) transposase NA
DBSCAN-SWA_21 2509254 : 2564734 51 Planktothrix_phage(40.0%) tRNA,transposase NA
DBSCAN-SWA_22 2610827 : 2677327 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_23 2876715 : 2950040 53 Catovirus(22.22%) transposase,tRNA,protease NA
DBSCAN-SWA_24 2961765 : 3012427 43 uncultured_Mediterranean_phage(50.0%) tRNA,holin,transposase NA
DBSCAN-SWA_25 3033378 : 3105878 58 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_26 3119385 : 3172903 44 Bacillus_phage(33.33%) holin,transposase NA
DBSCAN-SWA_27 3237361 : 3310523 57 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_28 3321810 : 3421923 108 uncultured_Caudovirales_phage(14.29%) terminase,tRNA,protease,tail,transposase NA
DBSCAN-SWA_29 4032779 : 4092969 52 Planktothrix_phage(28.57%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage