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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011697 Bordetella pertussis strain H763 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 28 0

Results visualization

1. NZ_CP011697
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011697_1 250589-250673 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011697_2 432032-432125 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011697_3 999502-999596 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011697_4 1895927-1896054 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011697_5 3434592-3434701 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164892 : 303019 117 Klosneuvirus(10.53%) transposase,tRNA,protease NA
DBSCAN-SWA_4 390855 : 448364 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_5 591472 : 652663 55 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_6 657987 : 704178 50 uncultured_Caudovirales_phage(18.18%) transposase,terminase,tRNA,tail NA
DBSCAN-SWA_7 710344 : 766372 48 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_8 888961 : 956937 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_9 1000466 : 1072983 60 Enterococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_10 1076736 : 1137761 50 Catovirus(20.0%) transposase,tRNA,holin NA
DBSCAN-SWA_11 1155331 : 1221964 53 Erysipelothrix_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_12 1321100 : 1389587 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_13 1450078 : 1505566 56 Mollivirus(16.67%) transposase,protease NA
DBSCAN-SWA_14 1798136 : 1846151 42 Moraxella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_15 1907713 : 1966983 51 Klosneuvirus(40.0%) transposase,tRNA,protease NA
DBSCAN-SWA_16 1977223 : 2021546 44 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_17 2051319 : 2115688 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_18 2302156 : 2363504 52 Yellowstone_lake_phycodnavirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_19 2384295 : 2455449 54 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_20 2539649 : 2590821 47 Salmonella_phage(20.0%) transposase,tRNA NA
DBSCAN-SWA_21 2690165 : 2730834 42 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_22 2786299 : 2859169 58 Moraxella_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_23 2862312 : 2929123 49 uncultured_Mediterranean_phage(28.57%) transposase,protease NA
DBSCAN-SWA_24 2959509 : 3003200 39 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_25 3384194 : 3437935 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_26 3444090 : 3503390 47 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_27 3518328 : 3577450 48 Planktothrix_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_28 4009663 : 4074575 59 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage