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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011698 Bordetella pertussis strain H764 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 29 0

Results visualization

1. NZ_CP011698
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011698_1 250592-250676 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011698_2 432035-432128 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011698_3 995316-995410 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011698_4 1819806-1819933 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011698_5 3430383-3430492 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164894 : 225405 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,transposase,tRNA NA
DBSCAN-SWA_4 233337 : 286925 47 Bacillus_phage(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_5 390858 : 448367 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 589384 : 650575 56 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_7 655899 : 702090 51 uncultured_Caudovirales_phage(18.18%) tail,transposase,terminase,tRNA NA
DBSCAN-SWA_8 708256 : 762186 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_9 884775 : 952751 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_10 996280 : 1068782 60 Enterococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_11 1072535 : 1134611 53 Catovirus(20.0%) transposase,holin,tRNA NA
DBSCAN-SWA_12 1152181 : 1218701 54 Erysipelothrix_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_13 1269629 : 1326840 49 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_14 1417073 : 1469226 45 Salmonella_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_15 1513151 : 1573063 50 Streptococcus_virus(12.5%) transposase,tRNA NA
DBSCAN-SWA_16 1618235 : 1673826 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_17 1831592 : 1890862 51 Klosneuvirus(40.0%) protease,transposase,tRNA NA
DBSCAN-SWA_18 1901102 : 1944376 45 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_19 1974149 : 2038518 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_20 2170047 : 2219700 43 Synechococcus_phage(15.38%) transposase,tRNA NA
DBSCAN-SWA_21 2476007 : 2534251 54 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_22 2576529 : 2643029 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_23 2806634 : 2861151 48 Diachasmimorpha_longicaudata_entomopoxvirus(20.0%) transposase NA
DBSCAN-SWA_24 2869176 : 2925962 41 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_25 2956348 : 3000039 41 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_26 3379985 : 3433726 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_27 3439881 : 3499179 47 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_28 3514117 : 3572190 47 Planktothrix_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_29 4004402 : 4069314 60 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage