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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011704 Bordetella pertussis strain H787 chromosome, complete genome 4 crisprs DEDDh,cas3,csa3,DinG 0 0 27 0

Results visualization

1. NZ_CP011704
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011704_1 250591-250675 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011704_2 623999-624108 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011704_3 2907590-2907706 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011704_4 3624458-3624551 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164893 : 225404 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,transposase,tRNA NA
DBSCAN-SWA_4 233336 : 286924 48 Bacillus_phage(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_5 555309 : 614609 48 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_6 620764 : 674505 48 Salmonella_phage(33.33%) transposase NA
DBSCAN-SWA_7 723443 : 763393 30 Pseudomonas_phage(33.33%) protease,transposase,tRNA,integrase attL 720691:720709|attR 740579:740597
DBSCAN-SWA_8 773320 : 820938 47 Bovine_alphaherpesvirus(10.0%) protease,transposase,tRNA,holin NA
DBSCAN-SWA_9 1005151 : 1099176 88 Bacillus_virus(30.0%) transposase NA
DBSCAN-SWA_10 1129562 : 1200533 53 uncultured_Mediterranean_phage(25.0%) protease,transposase NA
DBSCAN-SWA_11 1247927 : 1328802 59 Bacillus_virus(25.0%) transposase,tRNA NA
DBSCAN-SWA_12 1448197 : 1500350 46 Salmonella_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_13 1544275 : 1604188 52 Streptococcus_virus(12.5%) transposase,tRNA NA
DBSCAN-SWA_14 1649360 : 1704951 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_15 1937715 : 2007367 55 Staphylococcus_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_16 2018863 : 2068259 45 Erysipelothrix_phage(16.67%) transposase NA
DBSCAN-SWA_17 2079463 : 2120154 36 Klosneuvirus(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_18 2147937 : 2213486 58 Lake_Baikal_phage(20.0%) protease,transposase,tRNA NA
DBSCAN-SWA_19 2506084 : 2564328 54 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_20 2606607 : 2673107 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_21 2856559 : 3008207 120 uncultured_Mediterranean_phage(15.79%) protease,transposase,tRNA,holin NA
DBSCAN-SWA_22 3016417 : 3078572 46 Erysipelothrix_phage(20.0%) transposase NA
DBSCAN-SWA_23 3097994 : 3153124 48 Bacillus_phage(28.57%) transposase NA
DBSCAN-SWA_24 3234184 : 3307346 57 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_25 3318633 : 3418746 108 uncultured_Caudovirales_phage(14.29%) tRNA,protease,transposase,tail,terminase NA
DBSCAN-SWA_26 3579413 : 3626262 39 Lake_Baikal_phage(25.0%) transposase NA
DBSCAN-SWA_27 4030650 : 4084082 46 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage