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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011707 Bordetella pertussis strain H849 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 26 0

Results visualization

1. NZ_CP011707
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011707_1 250591-250675 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011707_2 519112-519205 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011707_3 1085527-1085621 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011707_4 1980904-1981031 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011707_5 3516380-3516489 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164893 : 225404 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) transposase,protease,tRNA NA
DBSCAN-SWA_4 233336 : 286924 47 Bacillus_phage(25.0%) transposase,protease,tRNA NA
DBSCAN-SWA_5 676449 : 737639 55 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_6 742963 : 789154 50 uncultured_Caudovirales_phage(18.18%) transposase,tail,terminase,tRNA NA
DBSCAN-SWA_7 795320 : 850299 47 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_8 949963 : 1089750 116 Bacillus_phage(11.76%) transposase NA
DBSCAN-SWA_9 1113554 : 1175050 54 uncultured_Mediterranean_phage(37.5%) transposase,holin,tRNA NA
DBSCAN-SWA_10 1184118 : 1246657 49 Planktothrix_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_11 1406078 : 1474565 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_12 1535056 : 1590544 56 Mollivirus(16.67%) transposase,protease NA
DBSCAN-SWA_13 1883113 : 1931128 42 Moraxella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_14 1992690 : 2051960 51 Klosneuvirus(40.0%) transposase,protease,tRNA NA
DBSCAN-SWA_15 2062200 : 2119697 56 Staphylococcus_phage(16.67%) transposase NA
DBSCAN-SWA_16 2134208 : 2198577 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_17 2385044 : 2446392 52 Yellowstone_lake_phycodnavirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_18 2467183 : 2538284 54 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_19 2622485 : 2673657 47 Salmonella_phage(20.0%) transposase,tRNA NA
DBSCAN-SWA_20 2771952 : 2812621 42 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_21 2868086 : 2940956 58 Moraxella_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_22 2944099 : 3010910 49 uncultured_Mediterranean_phage(28.57%) transposase,protease NA
DBSCAN-SWA_23 3041296 : 3081534 38 Planktothrix_phage(50.0%) transposase NA
DBSCAN-SWA_24 3465982 : 3519723 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_25 3525878 : 3585178 47 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_26 4002272 : 4067184 59 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage