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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011708 Bordetella pertussis strain H853 chromosome, complete genome 4 crisprs csa3,cas3,DinG,DEDDh 0 0 36 0

Results visualization

1. NZ_CP011708
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011708_1 250590-250674 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011708_2 432033-432126 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011708_3 996350-996444 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011708_4 3436693-3436802 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164892 : 225403 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,transposase,tRNA NA
DBSCAN-SWA_4 233335 : 286923 47 Bacillus_phage(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_5 390856 : 448365 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 590419 : 651609 55 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_7 656933 : 703124 50 uncultured_Caudovirales_phage(18.18%) terminase,transposase,tRNA,tail NA
DBSCAN-SWA_8 709290 : 763220 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_9 885809 : 953785 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_10 997314 : 1069831 60 Enterococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_11 1073584 : 1134611 51 Catovirus(20.0%) holin,transposase,tRNA NA
DBSCAN-SWA_12 1152181 : 1217766 52 Erysipelothrix_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_13 1316902 : 1448929 111 Planktothrix_phage(27.27%) transposase NA
DBSCAN-SWA_14 1477100 : 1515690 35 Emiliania_huxleyi_virus(14.29%) protease,transposase NA
DBSCAN-SWA_15 1598163 : 1666249 57 Streptococcus_virus(11.11%) transposase,tRNA NA
DBSCAN-SWA_16 1702198 : 1757789 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_17 1990553 : 2060205 55 Staphylococcus_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_18 2071701 : 2121103 45 Erysipelothrix_phage(16.67%) transposase NA
DBSCAN-SWA_19 2132307 : 2172998 37 Klosneuvirus(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_20 2200781 : 2257066 51 Lake_Baikal_phage(25.0%) protease,transposase NA
DBSCAN-SWA_21 2260173 : 2315492 48 Klosneuvirus(15.38%) transposase,tRNA NA
DBSCAN-SWA_22 2354605 : 2418183 48 uncultured_Caudovirales_phage(11.11%) protease,transposase NA
DBSCAN-SWA_23 2538331 : 2604052 59 Salmonella_phage(15.38%) protease,transposase,tRNA NA
DBSCAN-SWA_24 2690169 : 2730837 43 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_25 2734948 : 2817083 60 Bacillus_virus(28.57%) transposase,tRNA NA
DBSCAN-SWA_26 2841008 : 2889767 41 Pelagibacter_phage(25.0%) transposase NA
DBSCAN-SWA_27 2897764 : 2961511 54 uncultured_Mediterranean_phage(25.0%) protease,transposase NA
DBSCAN-SWA_28 2970270 : 3029450 56 Bacillus_virus(28.57%) transposase NA
DBSCAN-SWA_29 3126834 : 3190669 55 Pseudomonas_phage(30.0%) protease,transposase,tRNA NA
DBSCAN-SWA_30 3238813 : 3254050 15 Erwinia_phage(100.0%) protease,transposase NA
DBSCAN-SWA_31 3272473 : 3337357 49 Tupanvirus(12.5%) protease,integrase,holin,transposase,tRNA attL 3265867:3265885|attR 3338625:3338643
DBSCAN-SWA_32 3386295 : 3440036 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_33 3446191 : 3505491 47 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_34 3520429 : 3578502 47 Planktothrix_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_35 3710626 : 3842492 112 uncultured_Mediterranean_phage(10.34%) integrase,transposase,tRNA attL 3756319:3756336|attR 3798849:3798866
DBSCAN-SWA_36 4008605 : 4073517 59 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage