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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011709 Bordetella pertussis strain H864 chromosome, complete genome 4 crisprs cas3,csa3,DEDDh,DinG 0 0 31 0

Results visualization

1. NZ_CP011709
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011709_1 644871-644980 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011709_2 2929522-2929638 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011709_3 3644400-3644493 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011709_4 3825852-3825936 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 232665 : 307009 54 uncultured_Mediterranean_phage(15.38%) transposase NA
DBSCAN-SWA_3 489373 : 607268 102 Acinetobacter_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_4 611682 : 675515 47 Pandoravirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_5 694426 : 771735 57 Bacillus_phage(20.0%) protease,integrase,transposase,tRNA attL 741563:741581|attR 761451:761469
DBSCAN-SWA_6 1018718 : 1120062 92 Bacillus_virus(27.27%) transposase,tRNA NA
DBSCAN-SWA_7 1150448 : 1221419 52 uncultured_Mediterranean_phage(25.0%) protease,transposase NA
DBSCAN-SWA_8 1268813 : 1349688 58 Bacillus_virus(25.0%) transposase,tRNA NA
DBSCAN-SWA_9 1469079 : 1521232 45 Salmonella_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_10 1565157 : 1633243 59 Streptococcus_virus(11.11%) transposase,tRNA NA
DBSCAN-SWA_11 1669192 : 1724783 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_12 1746441 : 1838412 60 Moraxella_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_13 1958597 : 2028249 55 Staphylococcus_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_14 2039745 : 2089141 45 Erysipelothrix_phage(16.67%) transposase NA
DBSCAN-SWA_15 2100345 : 2141036 37 Klosneuvirus(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_16 2168819 : 2234368 58 Lake_Baikal_phage(20.0%) protease,transposase,tRNA NA
DBSCAN-SWA_17 2320545 : 2384123 48 uncultured_Caudovirales_phage(11.11%) protease,transposase NA
DBSCAN-SWA_18 2529064 : 2587308 53 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_19 2629588 : 2696088 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_20 2894427 : 2967752 52 Catovirus(22.22%) transposase,protease,tRNA NA
DBSCAN-SWA_21 2979477 : 3029197 43 uncultured_Mediterranean_phage(60.0%) holin,transposase,tRNA NA
DBSCAN-SWA_22 3037407 : 3099562 46 Erysipelothrix_phage(20.0%) transposase NA
DBSCAN-SWA_23 3118984 : 3174114 48 Bacillus_phage(28.57%) transposase NA
DBSCAN-SWA_24 3189699 : 3261712 60 Leptospira_phage(20.0%) holin,transposase NA
DBSCAN-SWA_25 3313305 : 3356212 34 Planktothrix_phage(50.0%) transposase NA
DBSCAN-SWA_26 3365504 : 3398187 41 uncultured_Caudovirales_phage(21.05%) terminase,transposase,tail,tRNA NA
DBSCAN-SWA_27 3409406 : 3455725 44 Bacillus_phage(40.0%) protease,transposase,tRNA NA
DBSCAN-SWA_28 3600404 : 3655378 44 Lake_Baikal_phage(20.0%) transposase NA
DBSCAN-SWA_29 3745191 : 3799386 53 Paramecium_bursaria_Chlorella_virus(14.29%) protease,transposase NA
DBSCAN-SWA_30 3810002 : 3870891 51 uncultured_Caudovirales_phage(33.33%) protease,transposase,tRNA NA
DBSCAN-SWA_31 4028671 : 4082103 45 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage