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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011720 Bordetella pertussis strain I113 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 29 0

Results visualization

1. NZ_CP011720
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011720_1 250591-250675 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011720_2 432034-432127 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011720_3 996351-996445 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011720_4 1891718-1891845 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011720_5 3428284-3428393 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164893 : 225404 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) tRNA,transposase,protease NA
DBSCAN-SWA_4 233336 : 286924 47 Bacillus_phage(25.0%) tRNA,transposase,protease NA
DBSCAN-SWA_5 390857 : 448366 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 590420 : 651611 56 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_7 656934 : 703125 51 uncultured_Caudovirales_phage(18.18%) tail,tRNA,terminase,transposase NA
DBSCAN-SWA_8 709291 : 763221 46 Planktothrix_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_9 885810 : 953786 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_10 997315 : 1069832 60 Enterococcus_phage(14.29%) tRNA,transposase NA
DBSCAN-SWA_11 1073585 : 1134612 53 Catovirus(20.0%) tRNA,holin,transposase NA
DBSCAN-SWA_12 1152182 : 1217766 53 Erysipelothrix_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_13 1316893 : 1385380 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_14 1445871 : 1501357 56 Mollivirus(16.67%) transposase,protease NA
DBSCAN-SWA_15 1793927 : 1841942 42 Moraxella_phage(18.18%) tRNA,transposase NA
DBSCAN-SWA_16 1903504 : 1962774 51 Klosneuvirus(40.0%) tRNA,transposase,protease NA
DBSCAN-SWA_17 1973014 : 2017337 45 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_18 2296898 : 2358246 52 Yellowstone_lake_phycodnavirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_19 2379037 : 2450191 54 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_20 2534391 : 2585563 47 Salmonella_phage(20.0%) tRNA,transposase NA
DBSCAN-SWA_21 2683857 : 2724526 42 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_22 2728637 : 2810772 60 Bacillus_virus(25.0%) tRNA,transposase NA
DBSCAN-SWA_23 2834697 : 2882406 40 Pelagibacter_phage(25.0%) transposase NA
DBSCAN-SWA_24 2890403 : 2954151 56 uncultured_Mediterranean_phage(22.22%) transposase,protease NA
DBSCAN-SWA_25 2962910 : 3007431 43 Bacillus_virus(20.0%) transposase NA
DBSCAN-SWA_26 3377886 : 3431627 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_27 3437782 : 3497082 47 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_28 3512020 : 3570093 47 Planktothrix_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_29 4002305 : 4067217 60 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage