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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011725 Bordetella pertussis strain I263 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 29 0

Results visualization

1. NZ_CP011725
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011725_1 250592-250676 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011725_2 519113-519206 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011725_3 1085528-1085622 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011725_4 1980905-1981032 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011725_5 3517429-3517538 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164894 : 225405 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) transposase,tRNA,protease NA
DBSCAN-SWA_4 233337 : 286925 48 Bacillus_phage(25.0%) transposase,tRNA,protease NA
DBSCAN-SWA_5 676450 : 737640 56 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_6 742964 : 789155 51 uncultured_Caudovirales_phage(18.18%) terminase,transposase,tRNA,tail NA
DBSCAN-SWA_7 795321 : 850300 47 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_8 901893 : 950915 44 Acinetobacter_phage(25.0%) transposase,holin NA
DBSCAN-SWA_9 973938 : 1089751 98 Bacillus_phage(12.5%) transposase,holin NA
DBSCAN-SWA_10 1113555 : 1168647 51 uncultured_Mediterranean_phage(37.5%) transposase,tRNA NA
DBSCAN-SWA_11 1174637 : 1223789 44 Catovirus(22.22%) transposase,holin,tRNA,protease NA
DBSCAN-SWA_12 1406078 : 1474565 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_13 1535056 : 1590544 56 Mollivirus(16.67%) transposase,protease NA
DBSCAN-SWA_14 1883114 : 1931129 42 Moraxella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_15 1992691 : 2051961 51 Klosneuvirus(40.0%) transposase,tRNA,protease NA
DBSCAN-SWA_16 2062201 : 2106524 45 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_17 2135258 : 2199627 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_18 2386095 : 2447443 52 Yellowstone_lake_phycodnavirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_19 2468234 : 2539335 54 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_20 2623535 : 2674707 48 Salmonella_phage(20.0%) transposase,tRNA NA
DBSCAN-SWA_21 2773002 : 2813671 42 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_22 2817782 : 2899917 60 Bacillus_virus(25.0%) transposase,tRNA NA
DBSCAN-SWA_23 2923842 : 2971551 40 Pelagibacter_phage(25.0%) transposase NA
DBSCAN-SWA_24 2979548 : 3043296 56 uncultured_Mediterranean_phage(22.22%) transposase,protease NA
DBSCAN-SWA_25 3052055 : 3097625 45 Bacillus_virus(20.0%) transposase NA
DBSCAN-SWA_26 3467031 : 3520772 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_27 3526927 : 3586227 48 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_28 3601165 : 3661471 49 Planktothrix_phage(11.11%) transposase,tRNA,protease NA
DBSCAN-SWA_29 4026424 : 4079856 46 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage