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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011726 Bordetella pertussis strain I270 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 26 0

Results visualization

1. NZ_CP011726
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011726_1 250604-250688 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011726_2 519125-519218 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011726_3 1085539-1085633 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011726_4 1980917-1981044 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011726_5 3516393-3516502 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164894 : 225417 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) tRNA,transposase,protease NA
DBSCAN-SWA_4 233349 : 286937 47 Bacillus_phage(25.0%) tRNA,transposase,protease NA
DBSCAN-SWA_5 676462 : 737651 56 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_6 742975 : 789166 51 uncultured_Caudovirales_phage(18.18%) terminase,tRNA,transposase,tail NA
DBSCAN-SWA_7 795332 : 850311 47 Planktothrix_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_8 949975 : 1089762 116 Bacillus_phage(11.76%) transposase NA
DBSCAN-SWA_9 1113559 : 1175055 54 uncultured_Mediterranean_phage(37.5%) tRNA,holin,transposase NA
DBSCAN-SWA_10 1184123 : 1246662 50 Planktothrix_phage(18.18%) tRNA,transposase NA
DBSCAN-SWA_11 1406083 : 1474570 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_12 1535061 : 1590549 56 Mollivirus(16.67%) transposase,protease NA
DBSCAN-SWA_13 1883126 : 1931141 42 Moraxella_phage(18.18%) tRNA,transposase NA
DBSCAN-SWA_14 1992703 : 2051973 51 Klosneuvirus(40.0%) tRNA,transposase,protease NA
DBSCAN-SWA_15 2062213 : 2119710 57 Staphylococcus_phage(16.67%) transposase NA
DBSCAN-SWA_16 2134221 : 2198590 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_17 2385058 : 2446406 52 Yellowstone_lake_phycodnavirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_18 2467197 : 2538298 54 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_19 2622498 : 2673670 47 Salmonella_phage(20.0%) tRNA,transposase NA
DBSCAN-SWA_20 2771965 : 2812634 42 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_21 2868099 : 2940969 58 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_22 2944112 : 3010923 50 uncultured_Mediterranean_phage(28.57%) transposase,protease NA
DBSCAN-SWA_23 3041309 : 3135346 90 Bacillus_virus(30.0%) transposase NA
DBSCAN-SWA_24 3465995 : 3519736 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_25 3525891 : 3585191 47 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_26 4002285 : 4067197 60 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage