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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011742 Bordetella pertussis strain I735 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 29 0

Results visualization

1. NZ_CP011742
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011742_1 250588-250672 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011742_2 432031-432124 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011742_3 995299-995393 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011742_4 1818754-1818881 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011742_5 3431441-3431550 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 174298 : 303018 110 Klosneuvirus(11.76%) protease,transposase,tRNA NA
DBSCAN-SWA_4 390854 : 448363 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_5 589368 : 650558 55 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_6 655882 : 702073 50 uncultured_Caudovirales_phage(18.18%) terminase,tail,transposase,tRNA NA
DBSCAN-SWA_7 708239 : 762169 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_8 884758 : 952734 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_9 996263 : 1068780 60 Enterococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_10 1072533 : 1134609 52 Catovirus(20.0%) transposase,holin,tRNA NA
DBSCAN-SWA_11 1152179 : 1218699 53 Erysipelothrix_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_12 1269626 : 1326836 50 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_13 1417069 : 1469222 44 Salmonella_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_14 1513147 : 1581233 57 Streptococcus_virus(11.11%) transposase,tRNA NA
DBSCAN-SWA_15 1617182 : 1672773 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_16 1830540 : 1889810 51 Klosneuvirus(40.0%) protease,transposase,tRNA NA
DBSCAN-SWA_17 1900050 : 1944373 44 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_18 1974146 : 2038515 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_19 2170053 : 2219706 43 Synechococcus_phage(15.38%) transposase,tRNA NA
DBSCAN-SWA_20 2476013 : 2534260 53 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_21 2576538 : 2643038 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_22 2671153 : 2708565 39 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_23 2807692 : 2862209 48 Diachasmimorpha_longicaudata_entomopoxvirus(20.0%) transposase NA
DBSCAN-SWA_24 2870234 : 2927020 40 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_25 2957406 : 3001097 40 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_26 3381043 : 3434784 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_27 3440939 : 3500237 47 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_28 3515175 : 3573248 47 Planktothrix_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_29 4004411 : 4069323 59 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage