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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011744 Bordetella pertussis strain I755 chromosome, complete genome 5 crisprs DEDDh,csa3,cas3,DinG 0 0 27 0

Results visualization

1. NZ_CP011744
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011744_1 250591-250675 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011744_2 624002-624111 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011744_3 1843105-1843232 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011744_4 2909714-2909830 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011744_5 3626583-3626676 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164893 : 225404 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,transposase,tRNA NA
DBSCAN-SWA_4 233336 : 286926 47 Bacillus_phage(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_5 555312 : 614612 48 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_6 620767 : 674508 48 Salmonella_phage(33.33%) transposase NA
DBSCAN-SWA_7 723446 : 764447 29 Mycobacterium_phage(50.0%) protease,transposase,tRNA NA
DBSCAN-SWA_8 774374 : 821992 47 Bovine_alphaherpesvirus(10.0%) holin,transposase,protease,tRNA NA
DBSCAN-SWA_9 1006208 : 1100245 88 Bacillus_virus(30.0%) transposase NA
DBSCAN-SWA_10 1130631 : 1201602 53 uncultured_Mediterranean_phage(25.0%) protease,transposase NA
DBSCAN-SWA_11 1242673 : 1324808 60 Bacillus_virus(25.0%) transposase,tRNA NA
DBSCAN-SWA_12 1328919 : 1370637 43 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_13 1745314 : 1793329 42 Moraxella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_14 1854891 : 1914161 51 Klosneuvirus(40.0%) protease,transposase,tRNA NA
DBSCAN-SWA_15 1924401 : 1981898 57 Staphylococcus_phage(16.67%) transposase NA
DBSCAN-SWA_16 1997454 : 2061823 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_17 2248291 : 2309639 52 Yellowstone_lake_phycodnavirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_18 2330430 : 2401584 55 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_19 2497413 : 2556194 50 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_20 2609780 : 2676280 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_21 2874619 : 2947944 53 Catovirus(22.22%) protease,transposase,tRNA NA
DBSCAN-SWA_22 2959669 : 3010331 42 uncultured_Mediterranean_phage(50.0%) holin,transposase,tRNA NA
DBSCAN-SWA_23 3031282 : 3103776 58 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_24 3117283 : 3170801 44 Bacillus_phage(33.33%) holin,transposase NA
DBSCAN-SWA_25 3235259 : 3305311 55 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_26 3308519 : 3413871 110 uncultured_Caudovirales_phage(14.29%) transposase,protease,tail,tRNA,terminase NA
DBSCAN-SWA_27 4032775 : 4075633 36 Planktothrix_phage(50.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage