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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011747 Bordetella pertussis strain I965 chromosome, complete genome 4 crisprs cas3,csa3,DEDDh,DinG 0 0 25 0

Results visualization

1. NZ_CP011747
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011747_1 644871-644980 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011747_2 2930569-2930685 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011747_3 3645448-3645541 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011747_4 3827949-3828033 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 232666 : 307010 54 uncultured_Mediterranean_phage(15.38%) transposase NA
DBSCAN-SWA_3 489373 : 607268 101 Acinetobacter_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_4 611682 : 675515 47 Pandoravirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_5 694426 : 771735 58 Bacillus_phage(20.0%) protease,tRNA,transposase,integrase attL 741563:741581|attR 761451:761469
DBSCAN-SWA_6 1018717 : 1120061 92 Bacillus_virus(27.27%) tRNA,transposase NA
DBSCAN-SWA_7 1150447 : 1221418 52 uncultured_Mediterranean_phage(25.0%) protease,transposase NA
DBSCAN-SWA_8 1268812 : 1349687 58 Bacillus_virus(25.0%) tRNA,transposase NA
DBSCAN-SWA_9 1434339 : 1490745 50 Enterococcus_phage(16.67%) transposase NA
DBSCAN-SWA_10 1566205 : 1634291 57 Streptococcus_virus(11.11%) tRNA,transposase NA
DBSCAN-SWA_11 1670240 : 1725831 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_12 1959645 : 2029297 55 Staphylococcus_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_13 2040793 : 2090189 45 Erysipelothrix_phage(16.67%) transposase NA
DBSCAN-SWA_14 2101393 : 2142084 37 Klosneuvirus(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_15 2169867 : 2235416 58 Lake_Baikal_phage(20.0%) protease,tRNA,transposase NA
DBSCAN-SWA_16 2321593 : 2385171 48 uncultured_Caudovirales_phage(11.11%) protease,transposase NA
DBSCAN-SWA_17 2530112 : 2588356 53 Planktothrix_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_18 2630635 : 2697135 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_19 2879538 : 3030244 118 uncultured_Mediterranean_phage(16.67%) holin,tRNA,transposase NA
DBSCAN-SWA_20 3051195 : 3191763 114 Bacillus_virus(11.11%) transposase NA
DBSCAN-SWA_21 3256221 : 3325224 55 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_22 3340670 : 3440783 107 uncultured_Caudovirales_phage(14.29%) transposase,protease,terminase,tail,tRNA NA
DBSCAN-SWA_23 3601452 : 3656426 44 Lake_Baikal_phage(20.0%) transposase NA
DBSCAN-SWA_24 3746239 : 3862958 100 Bacillus_phage(12.5%) protease,tRNA,transposase NA
DBSCAN-SWA_25 4007666 : 4072578 59 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage