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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011754 Bordetella pertussis strain J021 chromosome, complete genome 4 crisprs csa3,cas3,DinG,DEDDh 0 0 27 0

Results visualization

1. NZ_CP011754
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011754_1 250591-250675 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011754_2 432034-432127 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011754_3 995300-995394 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011754_4 3429621-3429730 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164892 : 225403 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) tRNA,protease,transposase NA
DBSCAN-SWA_4 233336 : 286924 47 Bacillus_phage(25.0%) tRNA,protease,transposase NA
DBSCAN-SWA_5 390857 : 448366 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 589371 : 650560 56 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_7 655884 : 702075 51 uncultured_Caudovirales_phage(18.18%) terminase,tRNA,tail,transposase NA
DBSCAN-SWA_8 708241 : 762170 45 Planktothrix_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_9 884759 : 952735 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_10 975913 : 1047229 57 Streptococcus_phage(14.29%) transposase NA
DBSCAN-SWA_11 1059447 : 1197158 107 uncultured_Mediterranean_phage(17.65%) holin,tRNA,transposase NA
DBSCAN-SWA_12 1317181 : 1385668 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_13 1446159 : 1501646 56 Mollivirus(16.67%) protease,transposase NA
DBSCAN-SWA_14 1596343 : 1664430 57 Streptococcus_virus(11.11%) tRNA,transposase NA
DBSCAN-SWA_15 1700379 : 1755970 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_16 1988734 : 2058386 55 Staphylococcus_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_17 2069882 : 2119278 45 Erysipelothrix_phage(16.67%) transposase NA
DBSCAN-SWA_18 2130482 : 2183966 46 Klosneuvirus(22.22%) tRNA,protease,transposase NA
DBSCAN-SWA_19 2200005 : 2265554 58 Lake_Baikal_phage(20.0%) tRNA,protease,transposase NA
DBSCAN-SWA_20 2685195 : 2725863 43 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_21 2781328 : 2854198 58 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_22 2857341 : 2924152 50 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_23 2954537 : 2993726 37 Planktothrix_phage(50.0%) transposase NA
DBSCAN-SWA_24 3379223 : 3432964 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_25 3439119 : 3498419 47 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_26 3513357 : 3572479 48 Planktothrix_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_27 4005741 : 4070653 60 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage