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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011755 Bordetella pertussis strain J023 chromosome, complete genome 4 crisprs cas3,csa3,DEDDh,DinG 0 0 28 0

Results visualization

1. NZ_CP011755
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011755_1 644871-644980 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011755_2 2929523-2929639 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011755_3 3644402-3644495 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011755_4 3825854-3825938 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 232666 : 307010 55 uncultured_Mediterranean_phage(15.38%) transposase NA
DBSCAN-SWA_3 489373 : 607268 102 Acinetobacter_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_4 611682 : 675515 47 Pandoravirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_5 694426 : 771735 58 Bacillus_phage(20.0%) integrase,tRNA,protease,transposase attL 741563:741581|attR 761451:761469
DBSCAN-SWA_6 1028122 : 1121110 86 Bacillus_virus(30.0%) transposase NA
DBSCAN-SWA_7 1151495 : 1222466 53 uncultured_Mediterranean_phage(25.0%) protease,transposase NA
DBSCAN-SWA_8 1269860 : 1350735 59 Bacillus_virus(25.0%) tRNA,transposase NA
DBSCAN-SWA_9 1470126 : 1522279 46 Salmonella_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_10 1566204 : 1634290 59 Streptococcus_virus(11.11%) tRNA,transposase NA
DBSCAN-SWA_11 1670239 : 1725830 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_12 1959644 : 2029296 55 Staphylococcus_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_13 2040792 : 2090188 45 Erysipelothrix_phage(16.67%) transposase NA
DBSCAN-SWA_14 2101392 : 2142083 36 Klosneuvirus(25.0%) tRNA,protease,transposase NA
DBSCAN-SWA_15 2169866 : 2235415 58 Lake_Baikal_phage(20.0%) tRNA,protease,transposase NA
DBSCAN-SWA_16 2320543 : 2384121 49 uncultured_Caudovirales_phage(11.11%) protease,transposase NA
DBSCAN-SWA_17 2529062 : 2587306 54 Planktothrix_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_18 2629586 : 2696086 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_19 2894425 : 2967753 53 Catovirus(22.22%) tRNA,protease,transposase NA
DBSCAN-SWA_20 2979478 : 3029198 43 uncultured_Mediterranean_phage(60.0%) holin,tRNA,transposase NA
DBSCAN-SWA_21 3037408 : 3099563 46 Erysipelothrix_phage(20.0%) transposase NA
DBSCAN-SWA_22 3118985 : 3174115 48 Bacillus_phage(28.57%) transposase NA
DBSCAN-SWA_23 3255175 : 3328337 57 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_24 3339624 : 3439737 108 uncultured_Caudovirales_phage(14.29%) tRNA,protease,transposase,tail,terminase NA
DBSCAN-SWA_25 3600406 : 3655380 44 Lake_Baikal_phage(20.0%) transposase NA
DBSCAN-SWA_26 3745193 : 3799388 54 Paramecium_bursaria_Chlorella_virus(14.29%) protease,transposase NA
DBSCAN-SWA_27 3810004 : 3870893 51 uncultured_Caudovirales_phage(33.33%) tRNA,protease,transposase NA
DBSCAN-SWA_28 4028674 : 4082106 46 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage