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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011763 Bordetella pertussis strain J090 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 30 0

Results visualization

1. NZ_CP011763
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011763_1 250590-250674 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011763_2 432033-432126 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011763_3 995301-995395 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011763_4 1819804-1819931 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011763_5 3432444-3432553 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164892 : 225403 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,tRNA,transposase NA
DBSCAN-SWA_4 233335 : 286923 47 Bacillus_phage(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_5 390856 : 448365 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 589370 : 650560 55 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_7 655884 : 702075 50 uncultured_Caudovirales_phage(18.18%) tail,terminase,tRNA,transposase NA
DBSCAN-SWA_8 708241 : 762171 46 Planktothrix_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_9 884760 : 952736 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_10 996265 : 1068782 60 Enterococcus_phage(14.29%) tRNA,transposase NA
DBSCAN-SWA_11 1072535 : 1134611 52 Catovirus(20.0%) holin,tRNA,transposase NA
DBSCAN-SWA_12 1152181 : 1218700 53 Erysipelothrix_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_13 1269628 : 1326838 49 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_14 1417071 : 1469224 44 Salmonella_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_15 1514198 : 1582284 57 Streptococcus_virus(11.11%) tRNA,transposase NA
DBSCAN-SWA_16 1618233 : 1673824 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_17 1831590 : 1890860 51 Klosneuvirus(40.0%) protease,tRNA,transposase NA
DBSCAN-SWA_18 1901100 : 1945423 44 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_19 1975196 : 2039565 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_20 2171093 : 2220746 43 Synechococcus_phage(15.38%) tRNA,transposase NA
DBSCAN-SWA_21 2477053 : 2535297 53 Planktothrix_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_22 2577575 : 2644075 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_23 2672190 : 2709602 39 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_24 2808695 : 2863212 48 Diachasmimorpha_longicaudata_entomopoxvirus(20.0%) transposase NA
DBSCAN-SWA_25 2871237 : 2928023 40 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_26 2958409 : 3002100 40 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_27 3382046 : 3435787 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_28 3441942 : 3501240 47 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_29 3516178 : 3574251 47 Planktothrix_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_30 4005414 : 4070326 59 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage