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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011765 Bordetella pertussis strain J098 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 29 0

Results visualization

1. NZ_CP011765
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011765_1 251639-251723 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011765_2 433082-433175 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011765_3 998449-998543 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011765_4 1896983-1897110 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011765_5 3433570-3433679 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 123122 43 Planktothrix_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_3 165941 : 226452 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) transposase,tRNA,protease NA
DBSCAN-SWA_4 234384 : 287972 47 Bacillus_phage(25.0%) transposase,tRNA,protease NA
DBSCAN-SWA_5 391905 : 449414 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 591468 : 652659 55 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_7 657983 : 704174 50 uncultured_Caudovirales_phage(18.18%) transposase,terminase,tRNA,tail NA
DBSCAN-SWA_8 710340 : 764270 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_9 887908 : 955884 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_10 999413 : 1071931 60 Enterococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_11 1075684 : 1137760 52 Catovirus(20.0%) transposase,holin,tRNA NA
DBSCAN-SWA_12 1155330 : 1220913 52 Erysipelothrix_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_13 1320049 : 1385478 55 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_14 1450076 : 1505564 56 Mollivirus(16.67%) transposase,protease NA
DBSCAN-SWA_15 1792425 : 1832755 36 Moraxella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_16 1846256 : 1911805 58 Lake_Baikal_phage(20.0%) transposase,tRNA,protease NA
DBSCAN-SWA_17 1939588 : 1980279 37 Klosneuvirus(25.0%) transposase,tRNA,protease NA
DBSCAN-SWA_18 1991483 : 2039840 45 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_19 2051336 : 2115705 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_20 2302173 : 2363521 52 Yellowstone_lake_phycodnavirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_21 2384312 : 2455466 54 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_22 2539666 : 2590847 47 Salmonella_phage(20.0%) transposase,tRNA NA
DBSCAN-SWA_23 2689142 : 2729811 42 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_24 2785276 : 2858146 58 Moraxella_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_25 2861289 : 2928100 49 uncultured_Mediterranean_phage(28.57%) transposase,protease NA
DBSCAN-SWA_26 2958486 : 3002177 39 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_27 3383172 : 3436913 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_28 3443068 : 3502368 47 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_29 3517306 : 3575379 47 Planktothrix_phage(12.5%) transposase,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage