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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP013083 Bordetella pertussis strain H682 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 28 0

Results visualization

1. NZ_CP013083
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013083_1 250591-250675 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013083_2 432034-432127 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013083_3 996353-996447 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013083_4 1891746-1891873 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013083_5 3429356-3429465 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164893 : 225404 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) transposase,protease,tRNA NA
DBSCAN-SWA_4 233336 : 286924 48 Bacillus_phage(25.0%) transposase,protease,tRNA NA
DBSCAN-SWA_5 390857 : 448366 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 590420 : 651612 56 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_7 656936 : 703127 51 uncultured_Caudovirales_phage(18.18%) transposase,tail,tRNA,terminase NA
DBSCAN-SWA_8 709293 : 763223 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_9 854101 : 903365 40 Vibrio_phage(33.33%) transposase,holin NA
DBSCAN-SWA_10 912977 : 977917 58 Bacillus_phage(18.18%) transposase NA
DBSCAN-SWA_11 997317 : 1060483 53 Enterococcus_phage(16.67%) transposase NA
DBSCAN-SWA_12 1066467 : 1125481 50 uncultured_Mediterranean_phage(37.5%) transposase,holin,tRNA,protease NA
DBSCAN-SWA_13 1316919 : 1385406 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_14 1445897 : 1501385 56 Mollivirus(16.67%) transposase,protease NA
DBSCAN-SWA_15 1793955 : 1841970 42 Moraxella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_16 2007763 : 2080976 60 Bacillus_virus(20.0%) transposase NA
DBSCAN-SWA_17 2094182 : 2139554 46 Bacillus_phage(25.0%) transposase NA
DBSCAN-SWA_18 2299023 : 2360371 52 Yellowstone_lake_phycodnavirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_19 2381162 : 2452316 55 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_20 2536516 : 2598812 55 Salmonella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_21 2684929 : 2725598 42 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_22 2781063 : 2853933 58 Moraxella_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_23 2857076 : 2923887 50 uncultured_Mediterranean_phage(28.57%) transposase,protease NA
DBSCAN-SWA_24 2954273 : 2993462 37 Planktothrix_phage(50.0%) transposase NA
DBSCAN-SWA_25 3378958 : 3432699 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_26 3438854 : 3498154 48 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_27 3513092 : 3571165 47 Planktothrix_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_28 4026480 : 4079912 46 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage