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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP013085 Bordetella pertussis strain H706 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 29 0

Results visualization

1. NZ_CP013085
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013085_1 250590-250674 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013085_2 433081-433174 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013085_3 997214-997308 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013085_4 1892516-1892643 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013085_5 3429092-3429201 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164892 : 225403 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,transposase,tRNA NA
DBSCAN-SWA_4 233335 : 287971 46 Bacillus_phage(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_5 391904 : 449413 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 590234 : 703988 111 uncultured_Caudovirales_phage(14.81%) terminase,tRNA,protease,tail,transposase NA
DBSCAN-SWA_7 710154 : 764084 46 Planktothrix_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_8 886673 : 954649 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_9 998178 : 1071745 60 Enterococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_10 1075498 : 1136525 51 Catovirus(20.0%) holin,tRNA,transposase NA
DBSCAN-SWA_11 1317763 : 1386176 57 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_12 1446667 : 1502155 56 Mollivirus(16.67%) protease,transposase NA
DBSCAN-SWA_13 1794725 : 1842740 42 Moraxella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_14 1846133 : 1908387 54 Lake_Baikal_phage(21.43%) protease,tRNA,transposase NA
DBSCAN-SWA_15 1936170 : 1976861 37 Klosneuvirus(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_16 1988065 : 2037461 45 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_17 2298745 : 2360093 52 Yellowstone_lake_phycodnavirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_18 2380884 : 2452032 54 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_19 2536231 : 2598532 54 Salmonella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_20 2684649 : 2725318 42 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_21 2780783 : 2853653 58 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_22 2856796 : 2924655 50 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_23 2955041 : 2998732 39 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_24 3378694 : 3432435 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_25 3438590 : 3497890 47 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_26 3512828 : 3570901 47 Planktothrix_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_27 3703025 : 3744781 38 Streptococcus_phage(11.11%) transposase,tRNA NA
DBSCAN-SWA_28 3753180 : 3788903 34 Burkholderia_phage(11.11%) integrase,transposase attL 3749767:3749784|attR 3794407:3794424
DBSCAN-SWA_29 4004162 : 4069074 59 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage