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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP013086 Bordetella pertussis strain H730 chromosome, complete genome 5 crisprs DEDDh,cas3,csa3,DinG 0 0 27 0

Results visualization

1. NZ_CP013086
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013086_1 250578-250662 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013086_2 623986-624095 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013086_3 2123962-2124089 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013086_4 2907606-2907722 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013086_5 3620279-3620372 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164892 : 225391 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) transposase,protease,tRNA NA
DBSCAN-SWA_4 233323 : 286911 47 Bacillus_phage(25.0%) transposase,protease,tRNA NA
DBSCAN-SWA_5 412373 : 483236 60 Heterosigma_akashiwo_virus(14.29%) transposase,tRNA NA
DBSCAN-SWA_6 496624 : 556247 49 Vibrio_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_7 561573 : 630696 56 Acinetobacter_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_8 673541 : 750850 58 Bacillus_phage(20.0%) transposase,integrase,protease,tRNA attL 720678:720696|attR 740566:740584
DBSCAN-SWA_9 996783 : 1099176 93 Bacillus_virus(27.27%) transposase,tRNA NA
DBSCAN-SWA_10 1129562 : 1200532 52 uncultured_Mediterranean_phage(25.0%) transposase,protease NA
DBSCAN-SWA_11 1247926 : 1328801 58 Bacillus_virus(25.0%) transposase,tRNA NA
DBSCAN-SWA_12 1349672 : 1369568 22 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_13 1449245 : 1501398 44 Salmonella_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_14 1545323 : 1605235 50 Streptococcus_virus(12.5%) transposase,tRNA NA
DBSCAN-SWA_15 1650407 : 1705998 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_16 2026173 : 2074187 42 Moraxella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_17 2135748 : 2195018 51 Klosneuvirus(40.0%) transposase,protease,tRNA NA
DBSCAN-SWA_18 2205258 : 2262755 56 Staphylococcus_phage(16.67%) transposase NA
DBSCAN-SWA_19 2278305 : 2342674 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_20 2507135 : 2565379 53 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_21 2607659 : 2674159 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_22 2856574 : 3007174 117 uncultured_Mediterranean_phage(15.79%) transposase,holin,tRNA NA
DBSCAN-SWA_23 3028125 : 3100619 58 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_24 3232102 : 3301105 55 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_25 3316551 : 3416664 107 uncultured_Caudovirales_phage(14.29%) tail,tRNA,terminase,transposase,protease NA
DBSCAN-SWA_26 3702231 : 3835156 114 uncultured_Mediterranean_phage(10.34%) transposase,integrase,tRNA attL 3746874:3746891|attR 3791513:3791530
DBSCAN-SWA_27 4001269 : 4066181 59 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage