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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP013090 Bordetella pertussis strain J191 chromosome, complete genome 5 crisprs DEDDh,csa3,cas3,DinG 0 0 26 0

Results visualization

1. NZ_CP013090
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013090_1 250588-250672 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013090_2 623997-624106 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013090_3 1840994-1841121 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013090_4 2910751-2910867 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013090_5 3628672-3628765 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 37010 : 79602 40 Synechococcus_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_2 107425 : 175249 56 Bacillus_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 178631 : 236268 48 Klosneuvirus(14.29%) tRNA,transposase,protease NA
DBSCAN-SWA_4 250682 : 303020 47 Bacillus_phage(25.0%) tRNA,transposase,protease NA
DBSCAN-SWA_5 555308 : 614607 48 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_6 620762 : 674503 48 Salmonella_phage(33.33%) transposase NA
DBSCAN-SWA_7 723441 : 763390 29 Pseudomonas_phage(33.33%) tRNA,transposase,protease,integrase attL 720689:720707|attR 740577:740595
DBSCAN-SWA_8 773317 : 820935 47 Bovine_alphaherpesvirus(10.0%) tRNA,transposase,holin,protease NA
DBSCAN-SWA_9 1005151 : 1099188 88 Bacillus_virus(30.0%) transposase NA
DBSCAN-SWA_10 1129574 : 1201589 53 uncultured_Mediterranean_phage(25.0%) transposase,protease NA
DBSCAN-SWA_11 1248982 : 1329857 59 Bacillus_virus(25.0%) tRNA,transposase NA
DBSCAN-SWA_12 1743203 : 1791218 42 Moraxella_phage(18.18%) tRNA,transposase NA
DBSCAN-SWA_13 1794611 : 1856865 54 Lake_Baikal_phage(21.43%) tRNA,transposase,protease NA
DBSCAN-SWA_14 1884648 : 1942317 56 Klosneuvirus(30.0%) tRNA,transposase,protease NA
DBSCAN-SWA_15 1963010 : 1990525 24 Mycobacterium_phage(25.0%) transposase NA
DBSCAN-SWA_16 2025307 : 2084883 47 Staphylococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_17 2247232 : 2308580 52 Yellowstone_lake_phycodnavirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_18 2329371 : 2400525 55 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_19 2497402 : 2556183 50 Planktothrix_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_20 2875656 : 2948982 54 Catovirus(22.22%) tRNA,transposase,protease NA
DBSCAN-SWA_21 2960707 : 3011372 42 uncultured_Mediterranean_phage(50.0%) tRNA,transposase,holin NA
DBSCAN-SWA_22 3032323 : 3104817 58 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_23 3118324 : 3171841 44 Bacillus_phage(33.33%) transposase,holin NA
DBSCAN-SWA_24 3194864 : 3231968 34 Vibrio_phage(50.0%) transposase,holin NA
DBSCAN-SWA_25 3323894 : 3424007 108 uncultured_Caudovirales_phage(14.29%) tRNA,terminase,transposase,protease,tail NA
DBSCAN-SWA_26 4033816 : 4087248 46 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage