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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP013095 Bordetella pertussis strain J201 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 28 0

Results visualization

1. NZ_CP013095
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013095_1 250590-250674 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013095_2 432033-432126 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013095_3 995302-995396 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013095_4 1817757-1817884 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013095_5 3428332-3428441 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70035 42 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77633 : 136107 53 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164893 : 303020 117 Klosneuvirus(10.53%) transposase,protease,tRNA NA
DBSCAN-SWA_4 390856 : 448365 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_5 589370 : 650561 55 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_6 655885 : 702076 50 uncultured_Caudovirales_phage(18.18%) tail,transposase,terminase,tRNA NA
DBSCAN-SWA_7 708242 : 762172 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_8 884761 : 952737 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_9 996266 : 1068782 59 Enterococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_10 1072535 : 1134611 52 Catovirus(20.0%) transposase,holin,tRNA NA
DBSCAN-SWA_11 1152182 : 1218701 53 Erysipelothrix_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_12 1269677 : 1326888 48 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_13 1417121 : 1470301 45 Salmonella_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_14 1512150 : 1580236 57 Streptococcus_virus(11.11%) transposase,tRNA NA
DBSCAN-SWA_15 1616185 : 1671776 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_16 1829543 : 1960604 119 Klosneuvirus(18.75%) transposase,protease,tRNA NA
DBSCAN-SWA_17 1972100 : 2036469 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_18 2167998 : 2225277 49 Synechococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_19 2472909 : 2531153 53 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_20 2573431 : 2639931 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_21 2668046 : 2705458 39 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_22 2804585 : 2859102 48 Diachasmimorpha_longicaudata_entomopoxvirus(20.0%) transposase NA
DBSCAN-SWA_23 2867127 : 2923912 40 uncultured_Mediterranean_phage(28.57%) transposase,protease NA
DBSCAN-SWA_24 2954298 : 2997989 40 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_25 3377934 : 3431675 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_26 3437830 : 3497128 47 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_27 3512066 : 3570139 47 Planktothrix_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_28 4002351 : 4067263 59 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage