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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP013872 Bordetella pertussis strain F778 chromosome, complete genome 4 crisprs cas3,DinG,csa3,DEDDh 0 0 30 0

Results visualization

1. NZ_CP013872
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013872_1 469017-469110 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013872_2 1033334-1033428 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013872_3 3453860-3453969 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013872_4 3826244-3826328 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 63965 57 Natrialba_phage(11.11%) transposase,tRNA NA
DBSCAN-SWA_2 248776 : 323120 56 uncultured_Mediterranean_phage(15.38%) transposase NA
DBSCAN-SWA_3 627403 : 688593 56 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_4 693917 : 740108 51 uncultured_Caudovirales_phage(18.18%) terminase,transposase,tail,tRNA NA
DBSCAN-SWA_5 746274 : 800204 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_6 922793 : 990769 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_7 1034298 : 1106803 60 Enterococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_8 1110556 : 1171583 53 Catovirus(20.0%) transposase,tRNA,holin NA
DBSCAN-SWA_9 1189154 : 1254738 53 Erysipelothrix_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_10 1353874 : 1422361 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_11 1482852 : 1538340 56 Mollivirus(16.67%) transposase,protease NA
DBSCAN-SWA_12 1633037 : 1701123 57 Streptococcus_virus(11.11%) transposase,tRNA NA
DBSCAN-SWA_13 1737072 : 1792663 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_14 2025427 : 2095079 55 Staphylococcus_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_15 2106575 : 2155971 45 Erysipelothrix_phage(16.67%) transposase NA
DBSCAN-SWA_16 2167175 : 2207866 36 Klosneuvirus(25.0%) transposase,protease,tRNA NA
DBSCAN-SWA_17 2235649 : 2301198 58 Lake_Baikal_phage(20.0%) transposase,protease,tRNA NA
DBSCAN-SWA_18 2570052 : 2635773 59 Salmonella_phage(15.38%) transposase,protease,tRNA NA
DBSCAN-SWA_19 2721890 : 2762559 42 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_20 2818024 : 2890894 58 Moraxella_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_21 2894037 : 2960848 50 uncultured_Mediterranean_phage(28.57%) transposase,protease NA
DBSCAN-SWA_22 2991234 : 3085271 90 Bacillus_virus(30.0%) transposase NA
DBSCAN-SWA_23 3403462 : 3457203 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_24 3463358 : 3522658 47 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_25 3537596 : 3595669 47 Planktothrix_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_26 3605469 : 3676810 59 Paramecium_bursaria_Chlorella_virus(20.0%) transposase,tRNA NA
DBSCAN-SWA_27 3746632 : 3798771 50 Paramecium_bursaria_Chlorella_virus(14.29%) transposase,protease NA
DBSCAN-SWA_28 3810394 : 3871283 51 uncultured_Caudovirales_phage(33.33%) transposase,protease,tRNA NA
DBSCAN-SWA_29 3901666 : 3969493 58 Bacillus_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_30 3997316 : 4054764 49 uncultured_Mediterranean_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage