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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP013875 Bordetella pertussis strain G807 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 31 0

Results visualization

1. NZ_CP013875
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013875_1 250592-250676 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013875_2 432035-432128 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013875_3 996350-996444 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013875_4 1891730-1891857 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013875_5 3427249-3427358 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164894 : 225405 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,tRNA,transposase NA
DBSCAN-SWA_4 233337 : 286925 47 Bacillus_phage(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_5 390858 : 448367 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 590421 : 651611 55 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_7 656935 : 703125 50 uncultured_Caudovirales_phage(18.18%) tail,tRNA,terminase,transposase NA
DBSCAN-SWA_8 709291 : 763220 45 Planktothrix_phage(66.67%) tRNA,transposase NA
DBSCAN-SWA_9 814813 : 886826 60 Acinetobacter_phage(20.0%) holin,transposase NA
DBSCAN-SWA_10 894460 : 957541 54 Bacillus_phage(25.0%) holin,transposase NA
DBSCAN-SWA_11 976963 : 1047230 57 Streptococcus_phage(14.29%) transposase NA
DBSCAN-SWA_12 1059448 : 1116831 47 uncultured_Mediterranean_phage(37.5%) protease,holin,tRNA,transposase NA
DBSCAN-SWA_13 1316903 : 1385390 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_14 1445881 : 1501369 56 Mollivirus(16.67%) protease,transposase NA
DBSCAN-SWA_15 1793939 : 1841954 42 Moraxella_phage(18.18%) tRNA,transposase NA
DBSCAN-SWA_16 1903516 : 1962786 51 Klosneuvirus(40.0%) protease,tRNA,transposase NA
DBSCAN-SWA_17 1973026 : 2017349 44 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_18 2047122 : 2111491 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_19 2297959 : 2359307 52 Yellowstone_lake_phycodnavirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_20 2380098 : 2451252 55 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_21 2536501 : 2598802 55 Salmonella_phage(18.18%) tRNA,transposase NA
DBSCAN-SWA_22 2684919 : 2725588 42 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_23 2781053 : 2853923 58 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_24 2857066 : 2923877 49 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_25 2954263 : 2997954 39 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_26 3182372 : 3244606 51 Xanthomonas_phage(33.33%) protease,transposase NA
DBSCAN-SWA_27 3263029 : 3314948 40 Tupanvirus(16.67%) holin,tRNA,transposase NA
DBSCAN-SWA_28 3376851 : 3430592 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_29 3436747 : 3496047 48 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_30 3510985 : 3569058 47 Planktothrix_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_31 4024373 : 4077805 45 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage