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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP013878 Bordetella pertussis strain H361 chromosome, complete genome 5 crisprs DEDDh,csa3,cas3,DinG 0 0 27 0

Results visualization

1. NZ_CP013878
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013878_1 250591-250675 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013878_2 624000-624109 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013878_3 1839939-1840066 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013878_4 2908638-2908754 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013878_5 3624458-3624551 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164893 : 225404 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) transposase,protease,tRNA NA
DBSCAN-SWA_4 233336 : 286924 47 Bacillus_phage(25.0%) transposase,protease,tRNA NA
DBSCAN-SWA_5 468502 : 586397 102 Acinetobacter_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_6 590811 : 654644 47 Pandoravirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_7 673555 : 750864 57 Bacillus_phage(20.0%) integrase,transposase,protease,tRNA attL 720692:720710|attR 740580:740598
DBSCAN-SWA_8 996797 : 1099178 93 Bacillus_virus(27.27%) transposase,tRNA NA
DBSCAN-SWA_9 1129564 : 1200534 52 uncultured_Mediterranean_phage(25.0%) transposase,protease NA
DBSCAN-SWA_10 1247928 : 1328803 58 Bacillus_virus(25.0%) transposase,tRNA NA
DBSCAN-SWA_11 1448198 : 1512413 60 Salmonella_phage(16.67%) transposase,protease,tRNA NA
DBSCAN-SWA_12 1742148 : 1790163 42 Moraxella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_13 1851725 : 1910995 51 Klosneuvirus(40.0%) transposase,protease,tRNA NA
DBSCAN-SWA_14 1921235 : 1965558 44 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_15 1995331 : 2059700 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_16 2246167 : 2307515 52 Yellowstone_lake_phycodnavirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_17 2328306 : 2399460 55 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_18 2496337 : 2555118 49 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_19 2607655 : 2674155 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_20 2857607 : 3009255 118 uncultured_Mediterranean_phage(15.79%) transposase,holin,protease,tRNA NA
DBSCAN-SWA_21 3030206 : 3102700 58 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_22 3116207 : 3169725 44 Bacillus_phage(33.33%) transposase,holin NA
DBSCAN-SWA_23 3192748 : 3241770 43 Vibrio_phage(25.0%) transposase,holin NA
DBSCAN-SWA_24 3293363 : 3336270 34 Planktothrix_phage(50.0%) transposase NA
DBSCAN-SWA_25 3345562 : 3378245 41 uncultured_Caudovirales_phage(21.05%) terminase,tail,transposase,tRNA NA
DBSCAN-SWA_26 3389464 : 3435783 44 Bacillus_phage(40.0%) transposase,protease,tRNA NA
DBSCAN-SWA_27 4029602 : 4083034 45 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage