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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP013891 Bordetella pertussis strain J121 chromosome, complete genome 4 crisprs csa3,cas3,DinG,DEDDh 0 0 26 0

Results visualization

1. NZ_CP013891
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013891_1 250592-250676 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013891_2 432035-432128 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013891_3 996358-996452 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013891_4 3428298-3428407 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164894 : 225405 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,transposase,tRNA NA
DBSCAN-SWA_4 233337 : 286925 47 Bacillus_phage(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_5 390858 : 448367 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 590421 : 651612 55 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_7 656936 : 703127 50 uncultured_Caudovirales_phage(18.18%) terminase,tail,transposase,tRNA NA
DBSCAN-SWA_8 709293 : 763223 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_9 885812 : 953788 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_10 997322 : 1069838 59 Enterococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_11 1073591 : 1134618 50 Catovirus(20.0%) holin,transposase,tRNA NA
DBSCAN-SWA_12 1152189 : 1217772 52 Erysipelothrix_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_13 1316908 : 1385395 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_14 1445886 : 1501374 56 Mollivirus(16.67%) protease,transposase NA
DBSCAN-SWA_15 1596072 : 1655984 50 Streptococcus_virus(12.5%) transposase,tRNA NA
DBSCAN-SWA_16 1701156 : 1756747 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_17 1989510 : 2059162 55 Staphylococcus_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_18 2070658 : 2120054 45 Erysipelothrix_phage(16.67%) transposase NA
DBSCAN-SWA_19 2131258 : 2199634 59 Klosneuvirus(22.22%) protease,transposase,tRNA NA
DBSCAN-SWA_20 2252968 : 2310247 49 Synechococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_21 2683875 : 2724544 42 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_22 2780008 : 2922829 109 Agrobacterium_phage(14.29%) protease,transposase,tRNA NA
DBSCAN-SWA_23 2953215 : 2996906 39 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_24 3377900 : 3431641 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_25 3437796 : 3497096 47 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_26 3512034 : 3570107 47 Planktothrix_phage(12.5%) transposase,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage