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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP013902 Bordetella pertussis strain J198 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 31 0

Results visualization

1. NZ_CP013902
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013902_1 251640-251724 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013902_2 433082-433175 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013902_3 997400-997494 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013902_4 2047936-2048063 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013902_5 3439851-3439960 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 71084 42 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 78682 : 137156 53 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 165942 : 226453 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) transposase,protease,tRNA NA
DBSCAN-SWA_4 234385 : 287973 47 Bacillus_phage(25.0%) transposase,protease,tRNA NA
DBSCAN-SWA_5 391905 : 449414 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 591468 : 652659 55 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_7 657983 : 704174 50 uncultured_Caudovirales_phage(18.18%) transposase,terminase,tRNA,tail NA
DBSCAN-SWA_8 710340 : 764270 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_9 886859 : 954835 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_10 998364 : 1070881 60 Enterococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_11 1074634 : 1135661 51 Catovirus(20.0%) transposase,tRNA,holin NA
DBSCAN-SWA_12 1153232 : 1218823 52 Erysipelothrix_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_13 1290063 : 1355371 57 Bacillus_virus(18.18%) transposase,tRNA NA
DBSCAN-SWA_14 1384535 : 1451035 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_15 1504554 : 1561765 48 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_16 1618308 : 1674714 50 Enterococcus_phage(16.67%) transposase NA
DBSCAN-SWA_17 1943378 : 1983708 36 Moraxella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_18 1997209 : 2062758 58 Lake_Baikal_phage(20.0%) transposase,protease,tRNA NA
DBSCAN-SWA_19 2078899 : 2132281 46 Klosneuvirus(22.22%) transposase,protease,tRNA NA
DBSCAN-SWA_20 2143485 : 2192881 45 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_21 2204377 : 2268746 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_22 2455214 : 2508793 45 Yellowstone_lake_phycodnavirus(14.29%) transposase,tRNA NA
DBSCAN-SWA_23 2538402 : 2609556 54 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_24 2705380 : 2764161 49 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_25 2815156 : 2869571 48 Diachasmimorpha_longicaudata_entomopoxvirus(20.0%) transposase NA
DBSCAN-SWA_26 2877596 : 2934382 40 uncultured_Mediterranean_phage(28.57%) transposase,protease NA
DBSCAN-SWA_27 2964768 : 3008459 39 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_28 3389453 : 3443194 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_29 3449349 : 3508649 47 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_30 3523587 : 3581660 47 Planktothrix_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_31 4012824 : 4077736 59 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage