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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP019624 Listeria monocytogenes strain 10-092876-1016 LM11 chromosome, complete genome 2 crisprs DinG,cas3,WYL,casR,RT,DEDDh,csa3 0 0 6 1

Results visualization

1. NZ_CP019624
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019624_1 507269-507853 Orphan NA
7 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019624_2 509489-509746 Orphan NA
3 spacers
RT

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 125402 : 131929 10 Listeria_phage(33.33%) tail NA
DBSCAN-SWA_2 1121938 : 1129361 8 Hokovirus(33.33%) NA NA
DBSCAN-SWA_3 1224367 : 1331487 118 Listeria_phage(75.0%) terminase,head,tRNA,integrase,tail,holin,protease,portal attL 1250116:1250139|attR 1292991:1293014
DBSCAN-SWA_4 1856026 : 1864312 8 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_5 2529476 : 2537318 7 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_6 2622609 : 2703994 100 Listeria_phage(79.69%) capsid,terminase,plate,tRNA,tail,integrase,holin,protease,portal attL 2649842:2649891|attR 2690822:2690871
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Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP019624.1|WP_031667946.1|2650323_2650587_+|anti-CRISPR-protein-AcrIIA4 2650323_2650587_+ 87 aa aa 14 NA NA 2622609-2703994 NA