CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP014782	Shewanella psychrophila strain WP2 chromosome, complete genome	9 crisprs	DEDDh,DinG,WYL,cas3,cas2,csa3,RT	0	0	11	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP014782_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014782_1

7058-7165

Orphan

Consensus_repeat	Method
GACACATGAGCATAGATGATAAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014782_1

>merge|NZ_CP014782|1|7058-7165|CRISPRCasFinder
GACACATGAGCATAGATGATAAACGGAAAAGTAGCCTTATGTGGCTTGTAGGACTCGTGTTAAGGCTGGTGTAAGTAGTGGAGTGACACATGAGCATAGATGATAAAC

>NZ_CP014782|1|1|7058-7165|CRISPRCasFinder
GACACATGAGCATAGATGATAAAC	GGAAAAGTAGCCTTATGTGGCTTGTAGGACTCGTGTTAAGGCTGGTGTAAGTAGTGGAGT
GACACATGAGCATAGATGATAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014782.1\|WP_077750608.1\|12059_12260_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_077750612.1\|15813_16065_-\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	unknown	unknown	gnl\|CDD\|171099
NZ_CP014782.1\|WP_077750600.1\|1967_2525_+\|NAD/FAD-utilizing-enzyme	unknown	unknown	unknown
NZ_CP014782.1\|WP_077750610.1\|14601_15543_+\|DUF1186-domain-containing-protein	unknown	unknown	gnl\|CDD\|234966
NZ_CP014782.1\|WP_077750605.1\|8410_9103_+\|SCO-family-protein	unknown	unknown	gnl\|CDD\|239266
NZ_CP014782.1\|WP_077750609.1\|13027_14242_+\|YcaQ-family-DNA-glycosylase	unknown	unknown	gnl\|CDD\|377630
NZ_CP014782.1\|WP_179948403.1\|10523_11165_-\|LysE-family-transporter	unknown	unknown	gnl\|CDD\|224199
NZ_CP014782.1\|WP_077750604.1\|8009_8369_+\|cytochrome-C-oxidase-subunit-IV-family-protein	unknown	unknown	gnl\|CDD\|227892
NZ_CP014782.1\|WP_077750606.1\|9192_9912_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|226674
NZ_CP014782.1\|WP_077750601.1\|4503_6327_+\|cbb3-type-cytochrome-c-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|213748
NZ_CP014782.1\|WP_077750602.1\|6326_7019_+\|cytochrome-c-oxidase-subunit-3	unknown	unknown	gnl\|CDD\|239216
NZ_CP014782.1\|WP_077750599.1\|976_1750_-\|bifunctional-2-polyprenyl-6-hydroxyphenol-methylase/3-demethylubiquinol-3-O-methyltransferase-UbiG	unknown	unknown	gnl\|CDD\|235350
NZ_CP014782.1\|WP_077750611.1\|15553_15814_-\|Txe/YoeB-family-addiction-module-toxin	unknown	unknown	gnl\|CDD\|284238
NZ_CP014782.1\|WP_077750598.1\|332_773_-\|FMN-binding-protein-MioC	unknown	unknown	gnl\|CDD\|181608
NZ_CP014782.1\|WP_077755494.1\|3028_4507_+\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|224537
NZ_CP014782.1\|WP_077750607.1\|9929_10169_-\|isopenicillin-N-synthase-family-oxygenase	unknown	unknown	gnl\|CDD\|226022

Protein	Function_ID	Function_description	E-value
NZ_CP014782.1\|WP_077750612.1\|15813_16065_-\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	gnl\|CDD\|171099	PRK11409, PRK11409, YoeB-YefM toxin-antitoxin system antitoxin YefM.	7.30964e-19
NZ_CP014782.1\|WP_077750610.1\|14601_15543_+\|DUF1186-domain-containing-protein	gnl\|CDD\|234966	PRK01617, PRK01617, hypothetical protein; Provisional.	2.33172e-11
NZ_CP014782.1\|WP_077750605.1\|8410_9103_+\|SCO-family-protein	gnl\|CDD\|239266	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c oxidase (COX). They contain a metal binding motif, typically CXXXC, which is located in a flexible loop. COX, the terminal enzyme in the respiratory chain, is imbedded in the inner mitochondrial membrane of all eukaryotes and in the plasma membrane of some prokaryotes. It is composed of two subunits, COX I and COX II. It has been proposed that Sco1 specifically delivers copper to the CuA site, a dinuclear copper center, of the COX II subunit. Mutations in human Sco1 and Sco2 cause fatal infantile hepatoencephalomyopathy and cardioencephalomyopathy, respectively. Both disorders are associated with severe COX deficiency in affected tissues. More recently, it has been argued that the redox sensitivity of the copper binding properties of Sco1 implies that it participates in signaling events rather than functioning as a chaperone that transfers copper to COX II.	2.87573e-39
NZ_CP014782.1\|WP_077750609.1\|13027_14242_+\|YcaQ-family-DNA-glycosylase	gnl\|CDD\|377630	pfam06224, HTH_42, Winged helix DNA-binding domain. This family contains two copies of a winged helix domain.	6.8184e-79
NZ_CP014782.1\|WP_179948403.1\|10523_11165_-\|LysE-family-transporter	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	6.24749e-33
NZ_CP014782.1\|WP_077750604.1\|8009_8369_+\|cytochrome-C-oxidase-subunit-IV-family-protein	gnl\|CDD\|227892	COG5605, COG5605, Predicted small integral membrane protein [Function unknown].	2.66727e-37
NZ_CP014782.1\|WP_077750606.1\|9192_9912_-\|SDR-family-oxidoreductase	gnl\|CDD\|226674	COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only].	9.33008e-84
NZ_CP014782.1\|WP_077750601.1\|4503_6327_+\|cbb3-type-cytochrome-c-oxidase-subunit-I	gnl\|CDD\|213748	TIGR02891, Probable_cytochrome_c_oxidase_subunit_1-beta, cytochrome c oxidase, subunit I. This large family represents subunit I's (CtaD, CoxA, CaaA) of cytochrome c oxidases of bacterial origin. Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits I-III form the functional core of the enzyme complex. Subunit I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit II and heme a of subunit I to the bimetallic center formed by heme a3 and copper B. This cytochrome c oxidase shows proton pump activity across the membrane in addition to the electron transfer. In the bacilli an apparent split (paralogism) has created a sister clade (TIGR02882) encoding subunits (QoxA) of the aa3-type quinone oxidase complex which reacts directly with quinones, bypassing the interaction with soluble cytochrome c. This model attempts to exclude these sequences, placing them between the trusted and noise cutoffs. These families, as well as archaeal and eukaryotic cytochrome c subunit I's are included within the superfamily model, pfam00115. [Energy metabolism, Electron transport].	0
NZ_CP014782.1\|WP_077750602.1\|6326_7019_+\|cytochrome-c-oxidase-subunit-3	gnl\|CDD\|239216	cd02865, Heme_Cu_Oxidase_III_2, Heme-copper oxidase subunit III subfamily. Heme-copper oxidases are transmembrane protein complexes in the respiratory chains of prokaryotes and mitochondria which couple the reduction of molecular oxygen to water to, proton pumping across the membrane. The heme-copper oxidase superfamily is diverse in terms of electron donors, subunit composition, and heme types. This superfamily includes cytochrome c and ubiquinol oxidases. Bacterial oxidases typically contain 3 or 4 subunits in contrast to the 13 subunit bovine cytochrome c oxidase (CcO). Subunits I, II, and III of mammalian CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. Subunits I, II and III of ubiquinol oxidase are homologous to the corresponding subunits in CcO. Although not required for catalytic activity, subunit III is believed to play a role in assembly of the multimer complex. Rhodobacter CcO subunit III stabilizes the integrity of the binuclear center in subunit I. It has been proposed that Archaea acquired heme-copper oxidases through gene transfer from Gram-positive bacteria.	2.57388e-31
NZ_CP014782.1\|WP_077750599.1\|976_1750_-\|bifunctional-2-polyprenyl-6-hydroxyphenol-methylase/3-demethylubiquinol-3-O-methyltransferase-UbiG	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	3.01517e-105
NZ_CP014782.1\|WP_077750611.1\|15553_15814_-\|Txe/YoeB-family-addiction-module-toxin	gnl\|CDD\|284238	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system. YoeB_toxin is a family of bacterial toxins that forms one component of the type II toxin-antitoxin system in E. coli whose antitoxin is represented by YefM, found in pfam02604. The plasmid encoded Axe-Txe proteins in Enterococcus faecium act as an antitoxin-toxin pair. When the plasmid is lost, the antitoxin is degraded relatively quickly by host enzymes. This allows the toxin to interact with its intracellular target, thus killing the cell or impeding cell growth. These toxins are highly potent protein synthesis inhibitors, specifically blocking the initiation of translation. In the case of YoeB, it binds to the 50 S ribosomal subunit in 70 S ribosomes and interacts with the A site leading to mRNA cleavage at this site. As a result, the 3'-end portion of the mRNA is released from ribosomes, and translation initiation is effectively inhibited.	3.91794e-46
NZ_CP014782.1\|WP_077750598.1\|332_773_-\|FMN-binding-protein-MioC	gnl\|CDD\|181608	PRK09004, PRK09004, FMN-binding protein MioC; Provisional.	4.12265e-89
NZ_CP014782.1\|WP_077755494.1\|3028_4507_+\|c-type-cytochrome	gnl\|CDD\|224537	COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion].	1.30637e-56
NZ_CP014782.1\|WP_077750607.1\|9929_10169_-\|isopenicillin-N-synthase-family-oxygenase	gnl\|CDD\|226022	COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only].	2.84712e-19

>NZ_CP014782.1|WP_077750602.1|6326_7019_+|cytochrome-c-oxidase-subunit-3
MNFFTSTFSKLTEKPWLAQSAGTFDQGVIEYQAGYPGKTALKFFIAVVTVIFFLFSVTYLSRSQYADFQALGGEPWSPLYQPLWLWVNTGWLLLASLSLHFAVGQVSETKLNRLLGLLTLGVIFSLFFLFGQWSVWQQLYLQGFSINSNPANSYFYLLTAIHGLHLLGGLFALARVLVIFSRKVKLDILQRSLVLCAWYWHYLLLLWLFIFALLTASPSTYNTIAAWCGL
>NZ_CP014782.1|WP_077750601.1|4503_6327_+|cbb3-type-cytochrome-c-oxidase-subunit-I
MSFTAIVDQADESQHPTSFMTKYIWSQDHKVIAIQYSITALFVGLVALGLSAMMRLQLGFPDTFSFIDPSNYLQFVTMHGMIMVIYLLTALLLGGFGNYLIPLMVGARDMVFPYLNMLSYWTYLLAVIVLLASFFVPGGPTGAGWTLYPPQTILPGTPGSDGGILLMLVSLAIFIVAFTMGGLNYVTTILQARAKGMTLMRMPLTIWGIFIATILGLLAFPALLVSAIMMMLDKLVGTSFFMPAILSLGEPLNYTGGSPVLFQHLFWFFGHPEVYIVALPAFGMVSDVIATHARKNIFGYRMMVWAIVAIGGLSFVVWAHHMYVSGMNPYFGFFFATTTLIIAIPTALKVYNWSLTLWRGNIHMTVPMMFAIGFIFTFTHGGLTGLFLGNVVVDLPLSDTYFVVAHFHMVMGVSPIMVLFAAIYHWFPKITGRFLNTGLGKFHFWMTFIGTYSIYLPMHYLGFLGVPRRYFAMGPTEFIPESAQSLNASITISALIVGLVQLIFLFNIIWSIFKGKKSGSNPWNATTLEWQTEYTPPRHGNWGEKIPVVYRWAYDYSVPGVKADFIPQNVSPEEVEMMDEPDVMPAATSETNDQTKVNSQSDDKGGV
>NZ_CP014782.1|WP_077755494.1|3028_4507_+|c-type-cytochrome
MAIAIVILLLVLVSVVFHFASPWWFTPIASNWTAIDDTITITFWITGIVFILVNGFLAFCVFRFRFDKNKRADYEPENKKLEVWLTVFTTVGVAAMLAPGLVVWGDFVTVPDDAETFEVVGQQWHWSYRLPGKDGILGQSAVELMDEKNPFGLNPDDMNAQDDVLIPSNEMHIVLDQPVKVLMRSKDVLHNFAVPQFRVKMDLVPGIETYLWFTPTRLGRFEMLCEELCGMAHYTMRGQIVVDTAEDYQAWLDKLFTFRESLNAPEGDLQLGKTLYASCAACHGNNGQGNETLNAPMLAGQPAWYLTRQLNYYKSQVRGSHQQDIYGQQMAAMANTLADAKAIKDVTAYIASLPAQAISPAAVNNGPLARSIASGQRLFTNCAYCHGDKAEGKFALNAPRLAGQHDWYLKRQLQNYRASIRGAHRGDLYGTQMIMMSRLLQNEQAIDDVIAYITRLKPASDTGYHQSVSRAVKATESPSIMDQSHETQEVSR
>NZ_CP014782.1|WP_077750600.1|1967_2525_+|NAD/FAD-utilizing-enzyme
MLRHYFISSDLDDLEKVEQELEAEGITEPQIHILSEKDADVENHHLHEVEPVLKQDVVHSTEIGAVIGFVISSATLMLAYEMGWTESAAGWLPFIFLSIVILGFCTWEGGFIGIQKPNVHFERFQELLHKGKHVLFVDVDPNQEPVFAKIINAHPKLEPAGLGSATPHWVVRWQDKFHSFMKTMP
>NZ_CP014782.1|WP_077750599.1|976_1750_-|bifunctional-2-polyprenyl-6-hydroxyphenol-methylase/3-demethylubiquinol-3-O-methyltransferase-UbiG
MLDRSKLTSGHSTSLNTAEEIAKFDRLAKEWRDPKGKFKQVLAFNQTRLIAIEKMIAQHLALDLNNPAPLAGLSLLDIGCGAGLLCEPLAELGADVTGIDASEHNILVANQHAKTNHISVNYIHCLASDLEDKSNRYDIVLNTEVIEHIADQQGLVDTCCRLLKPGGLLVMATLNRTVTSYIVGIIGAEYVMRYLPIGTHEWRFFVKPQEISAMLSKQGLETINVKGMTFNPFTKHWSVNRNTKVNYLLFATKSSDT
>NZ_CP014782.1|WP_077750598.1|332_773_-|FMN-binding-protein-MioC
MAKIDILVGTTLGNAEYVADEFSAILTGLSHENIIHMTPKYADLDPKSLWLIVSSTHGAGDLPDNIAPFLEEILSQKPDLSDTKYAICAIGDSSYDTFCQGPEKLAQALESCGAQVYVDKIQIDVQYDHVPEDPALAWLEQWQDRL
>NZ_CP014782.1|WP_077750604.1|8009_8369_+|cytochrome-C-oxidase-subunit-IV-family-protein
MSQITGKDAEPAEADKAQPKLHPISLYLKIWGLLFVLSTMSYLVDFFEVQGMLRWTLILIFMALKAGLIITIFMYVRWERLALKLVLFIPPLAIVVFISLMAIEGDYTLVNRLISFISV
>NZ_CP014782.1|WP_077750605.1|8410_9103_+|SCO-family-protein
MSRQVKAKLFLGVGVFIIVTLVLTSISFIWVKSSPRVNLQLQSASLLQKPIKLSDFTLVNQHNQYFTQTDLRGQWHILAYGYLNCPDVCPATLLLLNSLMLSLQKNHQFEDVQLLFYTIDPSRDSIEKLAEYVAFFGEDIIGLKPVEVELYDGMAKRFEQELGIRVKISRQMEGEDIYQVGHGVAIYLLDPQGRLHAVFEPSLDPFGNRHFNKDDIYHDYVLIRKNAARI
>NZ_CP014782.1|WP_077750606.1|9192_9912_-|SDR-family-oxidoreductase
MKKLVVITGASSGFGSAIARRLNALDYPLLLIARRLEPMEDLKLSNTICKAVDVCDAEGFKNAIIEAEAIYGEVETLINNAGIMLLSELDSQDPKEWEAMINVNLKGVLNGMEIVISKMKKRQSGTIVNMSSLAGQKTYEFHAAYCATKYAVHGLTEATRWELAPYNVRVIEISPGAAETELVSHISVPAVQKDYKDWKESIGGVISADDVASAVEFAVELPQSVCIRDLKIAPTKQQN
>NZ_CP014782.1|WP_077750607.1|9929_10169_-|isopenicillin-N-synthase-family-oxygenase
MQNKVGGLQIRVDGIWEDVPTIPEGIVVKIGQLLEMLTRGQLPATEHRVLTSKTKRYSAAFFLGDTLDQVVKPMIEVNK
>NZ_CP014782.1|WP_179948403.1|10523_11165_-|LysE-family-transporter
MIDLAILPLYLTTIIALLLIPGPDMLLIASSSLSYGKKVGIFASLGNATSGLILTLLAAMGVSALIAMNPMALQVLRILGGSYLMKMGWDCMRSGPADTPEITQQSGLAKVLYRRAAFCCLLNPKALLFFVLFLPQFVSPQLTATSGEQMLALGLLLNVMGLLFNLLLVLMVGTLGKSLLKNDKFRANQNKFMGMIFFALAILLLGSQVQAMG
>NZ_CP014782.1|WP_077750608.1|12059_12260_+|hypothetical-protein
MLRYILSAIILYAFWLTYQDASEYFDEQSLNEVELAQAEVTVKLAKQAALLEETRRYSQIEDLGSE
>NZ_CP014782.1|WP_077750609.1|13027_14242_+|YcaQ-family-DNA-glycosylase
MTSPYSAQEWLQLNLQQQGLLKSASSVSEAIERLSYVQIDSINVVERAHHHVLHNRIPEYQASQLDLAMTNKEIFEYWSHAAAYLPMSDYRYSLYHKTHLKQGGKHWFEPEHKVMREVKAKITAEGPLKASHFASTSTGTSTGWWDWKPAKRALEQLFMQGELMVAHRDKFQKVYDLTERVLPSNVDNQLPDETEFARYLIHRYLSAHGFGTIQQIFYLRKNIKAILVKTLNEMCLAGELARFSESGQEYFYFAEQQPLTPVPNRVWLLNPFDNLVIQRQRLKHWFGFDYQIEVYVPAAKRRYGYYSLPILWRDRFVGRVDVKAERKQGLLLLQQLTIEEQAFSSNSKCSTGSSSSSRAYESELEQFVAALALAINEYARFNNCQQWKLVKSNHKGVADLLVNK
>NZ_CP014782.1|WP_077750610.1|14601_15543_+|DUF1186-domain-containing-protein
MKLDEIITTLSRGDLTELPVDALLAARDQWSELLPVIDDLMQQFIAKEALTDPESNLLFFGICLIIDRKQFSCFDSLIYLTNKDDCNAPLDKLLGDFIASDLSTAYYILAQGKPEQLGYLVSSDQAGELVKMAALSALFSQLHTGQIDRETLNHSIQGFIDSLVKNNHSIALFELINLLISNQFNQYHSQFVGYVESKVIDEGPAENQCIIDWDNQSIGYSEWESGLISGEYDVIDSLSQWAGFNAESEMNDEELLAIFGEMMESSDELGYIDSENFPEMGDIQLPFIADIQAGRNDPCPCGSGKKYKKCCLN
>NZ_CP014782.1|WP_077750611.1|15553_15814_-|Txe/YoeB-family-addiction-module-toxin
MNILFSDNAWNDYLYWQQQDKKTLKRINLLIKDCQRTPFEGIGKPERLKENLSGYWSRRITDEHRLVYKATQDKLTIVAVRYHYSS
>NZ_CP014782.1|WP_077750612.1|15813_16065_-|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin
MSVYSFTEVRSNLKSVCDSVVNDCEPAVIHRRGAENVVMFSESEFNSWKETIYLLSNPVNAKHLLDSIKQVEDGQAQERELLD

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Crispr_ID: NZ_CP014782_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014782_2

1710312-1710423

Orphan

Consensus_repeat	Method
GCAATCACATTACCCTGATTTAAGCCATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014782_2

>merge|NZ_CP014782|2|1710312-1710423|CRISPRCasFinder
GCAATCACATTACCCTGATTTAAGCCATCGGTGCTCACTATGACAATATTCATACTCGGCTCCTCTTTGGGGGCGTCGTGAGGGCAATCACATCACCCTGATTTAAGCCATC

>NZ_CP014782|2|2|1710312-1710423|CRISPRCasFinder
GCAATCACATTACCCTGATTTAAGCCATC	GGTGCTCACTATGACAATATTCATACTCGGCTCCTCTTTGGGGGCGTCGTGAGG
GCAATCACATCACCCTGATTTAAGCCATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014782.1\|WP_077751990.1\|1709024_1710281_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|182528
NZ_CP014782.1\|WP_077751993.1\|1713821_1714508_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP014782.1\|WP_077751985.1\|1697890_1700344_-\|proprotein-convertase-P-domain-containing-protein	unknown	unknown	gnl\|CDD\|366670
NZ_CP014782.1\|WP_077755586.1\|1711580_1712693_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP014782.1\|WP_077755585.1\|1703704_1707559_+\|cobaltochelatase-subunit-CobN	unknown	unknown	gnl\|CDD\|376805
NZ_CP014782.1\|WP_077751983.1\|1695870_1696440_-\|DUF1566-domain-containing-protein	unknown	unknown	gnl\|CDD\|377878
NZ_CP014782.1\|WP_077751996.1\|1717193_1717823_+\|chemotaxis-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_077751992.1\|1712776_1713832_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|224482
NZ_CP014782.1\|WP_077751984.1\|1696458_1697886_-\|DUF1566-domain-containing-protein	unknown	unknown	gnl\|CDD\|377878
NZ_CP014782.1\|WP_077751998.1\|1718828_1719377_-\|NAD(P)H-nitroreductase	unknown	unknown	gnl\|CDD\|182761
NZ_CP014782.1\|WP_077751987.1\|1702697_1703225_+\|MotA/TolQ/ExbB-proton-channel-family-protein	unknown	unknown	gnl\|CDD\|223881
NZ_CP014782.1\|WP_077751995.1\|1715918_1716536_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NZ_CP014782.1\|WP_169915709.1\|1700351_1702511_-\|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor	unknown	unknown	gnl\|CDD\|273808
NZ_CP014782.1\|WP_077755587.1\|1714755_1715145_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_179948414.1\|1703227_1703581_+\|DUF2149-domain-containing-protein	unknown	unknown	gnl\|CDD\|378306
NZ_CP014782.1\|WP_149027396.1\|1715284_1715683_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_077755588.1\|1716616_1717120_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP014782.1\|WP_077751989.1\|1707668_1708706_-\|Preprotein-translocase-subunit-SecY	unknown	unknown	unknown
NZ_CP014782.1\|WP_077751997.1\|1717961_1718705_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293795
NZ_CP014782.1\|WP_077751982.1\|1695404_1695752_+\|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl\|CDD\|367760

Protein	Function_ID	Function_description	E-value
NZ_CP014782.1\|WP_077751990.1\|1709024_1710281_-\|ABC-transporter-permease	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	3.85269e-62
NZ_CP014782.1\|WP_077751993.1\|1713821_1714508_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	3.672e-119
NZ_CP014782.1\|WP_077751985.1\|1697890_1700344_-\|proprotein-convertase-P-domain-containing-protein	gnl\|CDD\|366670	pfam01483, P_proprotein, Proprotein convertase P-domain. A unique feature of the eukaryotic subtilisin-like proprotein convertases is the presence of an additional highly conserved sequence of approximately 150 residues (P domain) located immediately downstream of the catalytic domain.	2.9578e-11
NZ_CP014782.1\|WP_077755586.1\|1711580_1712693_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	8.28029e-22
NZ_CP014782.1\|WP_077755585.1\|1703704_1707559_+\|cobaltochelatase-subunit-CobN	gnl\|CDD\|376805	pfam02514, CobN-Mg_chel, CobN/Magnesium Chelatase. This family contains a domain common to the cobN protein and to magnesium protoporphyrin chelatase. CobN is implicated in the conversion of hydrogenobyrinic acid a,c-diamide to cobyrinic acid. Magnesium protoporphyrin chelatase is involved in chlorophyll biosynthesis.	0
NZ_CP014782.1\|WP_077751983.1\|1695870_1696440_-\|DUF1566-domain-containing-protein	gnl\|CDD\|377878	pfam07603, DUF1566, Protein of unknown function (DUF1566). These proteins of unknown function are found in Leptospira interrogans and in several gamma proteobacteria.	3.84477e-22
NZ_CP014782.1\|WP_077751992.1\|1712776_1713832_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|224482	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms].	3.61966e-10
NZ_CP014782.1\|WP_077751998.1\|1718828_1719377_-\|NAD(P)H-nitroreductase	gnl\|CDD\|182761	PRK10828, PRK10828, putative oxidoreductase; Provisional.	1.58139e-66
NZ_CP014782.1\|WP_077751987.1\|1702697_1703225_+\|MotA/TolQ/ExbB-proton-channel-family-protein	gnl\|CDD\|223881	COG0811, TolQ, Biopolymer transport proteins [Intracellular trafficking and secretion].	4.96727e-07
NZ_CP014782.1\|WP_169915709.1\|1700351_1702511_-\|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor	gnl\|CDD\|273808	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein. This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	7.52074e-96
NZ_CP014782.1\|WP_077751995.1\|1715918_1716536_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	2.17671e-27
NZ_CP014782.1\|WP_179948414.1\|1703227_1703581_+\|DUF2149-domain-containing-protein	gnl\|CDD\|378306	pfam09919, DUF2149, Uncharacterized conserved protein (DUF2149). This domain, found in various hypothetical prokaryotic proteins, has no known function.	4.77091e-39
NZ_CP014782.1\|WP_077755588.1\|1716616_1717120_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	2.82086e-25
NZ_CP014782.1\|WP_077751984.1\|1696458_1697886_-\|DUF1566-domain-containing-protein	gnl\|CDD\|377878	pfam07603, DUF1566, Protein of unknown function (DUF1566). These proteins of unknown function are found in Leptospira interrogans and in several gamma proteobacteria.	2.62821e-16
NZ_CP014782.1\|WP_077751997.1\|1717961_1718705_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293795	cd07709, flavodiiron_proteins_MBL-fold, catalytic domain of flavodiiron proteins (FDPs) and related proteins; MBL-fold metallo-hydrolase domain. FDPs catalyze the reduction of oxygen and/or nitric oxide to water or nitrous oxide respectively. In addition to this N-terminal catalytic domain they contain a C-terminal flavin mononucleotide-binding flavodoxin-like domain. Although some FDPs are able to reduce NO or O2 with similar catalytic efficiencies others are selective for either NO or O2, such as Escherichia coli flavorubredoxin which is selective toward NO and G. intestinalis FDP which is selective toward O2. These enzymes belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. Some members of this subgroup are single domain.	1.89138e-57
NZ_CP014782.1\|WP_077751982.1\|1695404_1695752_+\|antibiotic-biosynthesis-monooxygenase	gnl\|CDD\|367760	pfam03992, ABM, Antibiotic biosynthesis monooxygenase. This domain is found in monooxygenases involved in the biosynthesis of several antibiotics by Streptomyces species. It's occurrence as a repeat in Streptomyces coelicolor SCO1909 is suggestive that the other proteins function as multimers. There is also a conserved histidine which is likely to be an active site residue.	1.32293e-05

>NZ_CP014782.1|WP_077751990.1|1709024_1710281_-|ABC-transporter-permease
MSLVNESKVYIEGIKQAFDEMRHHKLRTALTLLGMIFGVGAVIAMLSVGEGAEREALKMIESMGVRNLVVNARPADGEALKSIREHSIGLSLRDVESAKDTLPFVENWSAEKQVKTFSLFSLEGRSDAQVKGVTPSYFDLSALKMSEGAAFNSKDEAHYRQVAVLGPEAARSLFPQGKAIGSVIKINHQWFTVVGVLTDAQNGKSKIQGVKLGGERNEVFIPLTTALKKMNFKSLEDELDAFKVSLTEGVEPSLAAKSLRHLINRRHGGEKDYDIVVPADLLAQHQKTQQIFNIVMACVAGISLLVGGIGIMNIMLATIMERTGEIGLLRALGARRKDIARQFLIESIVISATGGVIGIGVGLLLAFVISSAAGWPVAWSPFAILLALGVCMTIGVGFGLYPAKKAAKLDPIVALQRD
>NZ_CP014782.1|WP_077751989.1|1707668_1708706_-|Preprotein-translocase-subunit-SecY
MFYNQDLALRFPKGKFAMWSVYSFTGASILASIVFSLLLFLSIDDDPVMQLLFGGLAVIFELGKFFAWYEVGERHGRRNYPGMLSALGFYLVLAAISIGGSVGGINSATNKAQEHVNVQQSKVNAFNMQIEAIEKQIALNNVAAEKYIQMERIATGVTRIQKENNKLRLEQQTLAMERDSLPLVSQGSVIGLIDSLASFLNIQASTAQLGLVVFLSVLLDFFAAFFVGLIGEENRFRHQFHNMKPLTIEGFTAKESMPTELLSHFDETDTVSEPEKTSYEQVIQALSSNRVNCSKRAVSKHLNFSTDEVDEIFARLFDEGVVSKKANNHYQWHGVSKAELEAELA
>NZ_CP014782.1|WP_077755585.1|1703704_1707559_+|cobaltochelatase-subunit-CobN
MSNYNSTPKKALLTKLAKDQPFELIQLITKGKSDKEIAEQWRSADLVMLDGINPSLSEYMFEKFETIPTLFPQLKIVSLGDLEGKTFNQNLAVEQSQMLAEYFRNAGGRNYKNMMAYIAGDVFNISKIKAPKPSVTPVTGLYHPQYTDLLTDNEQAFFTWLAPTKQQAVITIGIHRSAIDYEQQQVVDAMINGIEAKGQRAFAFFYDDKEDKLTYTDLLTDDDGQVRANLMINYRSLHYVKKRRDEFEQLGIPIIHALNYVDGDSEHFAQAQAGISPGLTPFLLVMPEDTGSIDPSIIAANERGNKVVMPREMNALIERTVNHAKLAITANKDKRVATFIWNYPPGEKNIGAAFLDVPASIEVIAKAMREDGYNVNPKPAKEIIESAGKLLRPYYRDEDASGLLNEDLADLLPLSIYNAWFADLPISVQESINKRWGQAKDSPMLTDKDGELAFIIPRMNLGNLIVLPQGGRSNDISEQGALYHDMKTPINHGFLAIYLYAEQVFNADAIIHLGTHGSQEWLPGKERGLSVNDSPNLAVGNVPVFYPYIIDNVGEAMQAKRRGRATTISHLTPGFAKAGLYADIAKLNDLLSNYRLLDEGQTKENTKKNITKKVEALNLLKDLAMEKQEFDRDFDKNLARLQDQLTEMAEQAQPLGVHTFGLLPKEQHLYSTMLQMLGDDFTKAAKVYENDHGLTLPADKQKDRLNVTHLEALAGFQLLQASIQGKQLDDLSQELQTWLSTAKQYWDNFAKIAETENLLLALSANYIPVSYGGDPIRSPESVPTGRNLIGFNPAKVPSKEAYAAGVLLLEQTVADYREKHGKYPDKLAFSLWSLETMRHHGALEAQILQALGVKPQWDDQDDVIGVEVIPMSELKRPRIDVVVSATGLYRDAFPNVMLWMADAIDTIATMKEDNNFAYRHSQAMKQQLVDEGKTEEEADYLSSIRIFSNDSGTYGSGLADQTLNSGNWETDDQMSSLYVKRMGYAYGKDESRWSEKVSDVDLYGKALSGTDAVIFSRSTNLYALLTNDDPFQYFGGIGQAVRNIDGQTPEMYISNLRRKDKIKSQTMASFLNNEMRGRYFHPRWIEAMQASGYAGATTILDRINNLWGWEVMTPELVRDDQWQEVFEVYIEDKYQLDMQAFFEENNAHALAQMLERMIEANRKDYWKTDEATIKKMLETYISLANRFDVVTDNDKFTEFVETRGAGFGLAPLAPALEVPQPSQSKPTQAKQQVTGQKLEQVQKPSEQKDDFWYLVPLFALLFIFFAGAVKPLLTREPQRGKDVG
>NZ_CP014782.1|WP_179948414.1|1703227_1703581_+|DUF2149-domain-containing-protein
MRFLDEDEELNPILSSVNLIDVFLVLIAALLIAIAQNPLNTFSAENVTLVKNAGKPNMEVIVKEGKEIKQYKSSGNIGSGEGARAGIAYKMADGSMIYVPEDTGSSPSDKQAAINNQ
>NZ_CP014782.1|WP_077751987.1|1702697_1703225_+|MotA/TolQ/ExbB-proton-channel-family-protein
MNIFLLEGLLANLSGYLMTPVLICIVLLLIYSIYAMGRFAGLFYVRRKNAQGYRQTIQIKERKWYSGYPIHNYFVNNPKACEDELEVFALKKLENLRVVTRVAPMLGLIATMVPMGPALKALADGNIQGISESLIIAFASVIWGLVIATLTFWPASVKKRWFAAELINIRKLRGE
>NZ_CP014782.1|WP_169915709.1|1700351_1702511_-|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor
MKLLPISVAVITCIYSGLSFSEVEPSTKVEQKKDKMEVIKIVGTRLEKPLTEISGSAVVITAADIENLVATELSDLFRNEPGVSVTGSAGTPQNITIRGVTGNRILMIKDGVRMADGYGASDINDSVGRFNFDLDDVKSIEVAKGPASAFFGSGALGGVVKVETKEAADYLYHHNNYLSLKGLYSGVNEQKKLSFTAATKAFDIPVMLRGSQWQGHEQQNYGGTRPPADIDGTSISFNTNLISNKLWSLSVNSDWQSQTKSTNASPSSVPQPDGAWDVVKRDNDEEQSSMVQQIKLQYSPESFILFDNLSGQIFYGETENENNVNDLLTRTFMNVQERYRRYESNETFKEKTYGFSVDMDLWTELYGIEHNFLYGLEGQSLNHSRTKNRNKIENGKQTYWSNKPFADASTDSFSVYISDDISLTDSWGVLLSSRYDRNSLTPEQTEISNITLEDNDSDNISSSISLSYEPSDGISGYLAYSQGYRAAPYDKVYGSIPHLFAFPPFEIIPNSELHEETSESIELGMRWQWQDLDIAASYYYSQFDGFIDWVEVGLRQSDGVFERQFVNIDSASSWGGEFNLDYNLTENLDVQFQMGWVDGKNNDTDEKLRTLTPLEGSVSLNYRYDNLRLSGLVNGASEMANVTTCVDPLTGPQDCPAPAGWVIVDLAAQYEVYAHFKVNLSIKNLLDKEYVRYQDVAGTSGYQPTQPGRTFSASVSYTF
>NZ_CP014782.1|WP_077751985.1|1697890_1700344_-|proprotein-convertase-P-domain-containing-protein
MKHHFKLAAVALLVSGICGASELHFLTPLTPIQVESAGQAKDYLSQEFSREHQLAYERRGVFGHYYSFYPLIDGLPIFSVVDALGVNRGGMPFRYYQASVASLQSHIWPESELAPESDVIAQAIGIEADNFDIQGLAKGWWLTEASGIEPVWQVKVKQFKPEATFSFYIDLTHEQFLAKERTVEAYLADFTPNDLLTGNSLKALVFNPDPKTKLMDESLEQQALSETLPEAAYSRVELQDLQAVDGGFMLSGPYVKVVDLAEPVNPAPLLTGDIEWRRHDDEFVQVMAYYHLDKAQRHLQSLGYEGASQIFYSPIEIDARGGTNDQSAYSFLENRILLGVGGVPDGEDADVIWHEFGHGLMHFINNSDKGGDSGAIGEGFSDFYAGVHSFRDPQGQVFEPNVMFNWDARFGNRKPRTLDDQSAKYNPNYNYPAHQWVKDTLGDQLWSTPLFQGMRRAFESHGDEAIDDFERIVIEAMYGMGAGVRMDQLALSTLDMAARMHPEKDYAAILQQQFDQHGLILDPIELAISSVVKQQTGSVPLNLSLQNLAVAKLEAISFSFSDLPEGLVVSGDMPPITELLAGDTKAIEGQFTLALGDNLICGQKITLPVDVHYTSDIAAINHSRLALAMTIGEGAHQTATGVGGDLNDATANDVGLTKEMGVNNFYLDFSQQDFKVNQDLTLSLHIEHPQFDQLSIKLISPSGLQVDIWDRDYYPRTSFRHTLPNNVADIDWSAVIDESLTGQWQLQIIDHDAGHKGKLLSWSLSQVSEYTCSQPDVTPQPDKKTDEKTKDSGGSLGWTLWMLCFAYITRQYVKTEK
>NZ_CP014782.1|WP_077751984.1|1696458_1697886_-|DUF1566-domain-containing-protein
MKRNLSPLYLALVCAGLTACGSSDDSTTTPTTEPGKIYSVSFAAGTDVDGQVCADSNQNFVCDMGETQADMTAGVANLSSEDVAVLNNYYIVQSEGASSDKPMVRYLASAAIADKSEVTLSPVSSMVSGLMLNGMTQEKALASIATSLNKQFKLELPTDASLLQHHDALTDFNPKFDIMWQAIGGEAVQSPALLAAMSQHLASWAGMTDEEMASFAKDIVGYASQLNSAYPMTDTGITLFADGSAFASDSQDEQFAGQDANYGLDKTNNDNSDGLAGFSYLKLDAKGEALVADAQQWSCVKDLNTGLIWENKAADGASVQDKDHLLVYIKDDRAVIEGEVSEASCDDANGICTIAQYKTYLNELEEKQGLCGVKDWQLPTFDQLYSLVNFASTDSGSDDVQMAVDIKFFPNTADNDYWTSTPSVENYASMDQSAYMWTLGFNRWYMGATTSYSYCVSQDDCDYPSALPVRLVGVK
>NZ_CP014782.1|WP_077751983.1|1695870_1696440_-|DUF1566-domain-containing-protein
MKKLLLAAAIILSFSASAVEQACEMSFDASTPTARFIDNNDGTVTDQATKLTWMRCSVGQSWNNETKHCDGMPVAVFWQGALQAADNARTNEANKLYHFADKTNWRVPNIKELVSIREQRCVHPAMNNVIFPNVDAIAQAEGGYSYLWSSTPVIADEGIMNLDVTAGAVVASSSVVDYVRGVLLVADPE
>NZ_CP014782.1|WP_077751982.1|1695404_1695752_+|antibiotic-biosynthesis-monooxygenase
MKRLLITVLMIILPTTAMAQNVILINPFEVPKGQETETIVYWEAARDFLMEQPGYVSTELHQSIQPDAKFHLINIAEWESIETFKAATSKMRKELKQKPIEGMKFYPALYDVIRK
>NZ_CP014782.1|WP_077755586.1|1711580_1712693_-|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MRAPVTSIELGVLKQNIEATGELVSADTISMMPPSIRRVWQYQVKQLAPEGSQVQEGDMVAQLDTSELTQRLSVKTAKLEATLQDIETSKLRNAKQLEELRLALAEAKMSFDKAERKFKLSDETVAAIDKVKYEKDAVIAKDKVKLTQQKIELENQSAKQREAMLEGDRQKFSSEVAALKRGIESLTLIAPREGMVVYGNDSQGNKIKEGQSVFMGDAVLSIPDLNHMQVNMTIPEVEASRVKLGQKLKIRLDANPDKVFHGEIIELGAVFRHKNQEVPLVVFDAVASINEADTDLMRPGMTAKIAIDIANDKEELLLSLDAVHYESGQAYVLLPGLFGDSKQDVTIGTIGKEQVSIRSGLEAGQEVLLP
>NZ_CP014782.1|WP_077751992.1|1712776_1713832_-|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MLLSSHRSPFLSKLVLIASFSLPINFAVAGEVSVINNTAPSAVSAADIANTGEQALLLTGQISSVQSQSFMVPKAGDAWRYQIQWMLPEGTVAEPGETVVIFDKSQIANQIEQLEASLLRVTAQEQSQGIDLTASVLQAKFDVKQKKSELEKSQLDADVPADYIAAKDYAENQFNLMQARSELSKVEQALKEVLDKQAASKAQLAIDRRRAQLELQQALNGLEQLEVKAKIKGPVLYDSDPWNNKKFAVGDTVQIGRQIATLPAMEELEVIAWVNEVDVDKIAVGTQVTLRLDSQSEKPFTGNIKGIGRQAQKQPAWGQSNWFKVEVSFKADEDIKIVPGMSVLVSTGAVS
>NZ_CP014782.1|WP_077751993.1|1713821_1714508_-|ABC-transporter-ATP-binding-protein
MIRVSGLTKEYQMGESSVFALRGVDFTIKQNEFVAIMGPSGSGKSTLMNIIGCLDKPSSGSYQLNEQEVASLDDDALSAVRNKEIGFVFQSFHLLPRMSALQNVILPLRYSIPPNDDTAYANELLMRVGLGTRQDHRPNQLSGGQRQRVAIARALVNKPAILLADEPTGALDSKTSVEIMELFTELHQAGQTIILVTHEEEVAAYAHRVIRMRDGHIVEIEERGVYAA
>NZ_CP014782.1|WP_077755587.1|1714755_1715145_-|hypothetical-protein
MNYYFIAAAILGFLTCIGHFTYGVKQYLNPMLAASFDPVAKAIMHCVFHYVSAFLVLSTLVLAVCGLDLVSYMQGISLVLFVALNFALFAVWQIYFAFFSDINSPFKHLFQWTLFSSISALSLMGIYFT
>NZ_CP014782.1|WP_149027396.1|1715284_1715683_-|hypothetical-protein
MKPSLILPLLCLVPLSASAAPSEAEIIFSNEVIECASYYQISSDAIAAMNAPQMQTVGERLKSSSVKAISIAEKYQAKEDVADVLSNVQQKQLASLPDSKSLGGLMGKYKDSCKKLLAEPQKRLDYWIMATM
>NZ_CP014782.1|WP_077751995.1|1715918_1716536_-|GNAT-family-N-acetyltransferase
MKERTLDNTERTEYLSGEYMVLEPLTLEHVPALSLAVADGELWQLWYTSAPHPDEMKSYIETAIAAEQRGEVLAFAVRDKRSGELIGSTRICAWDQENRRLEIGHSWYAKRAQKTGINTEAKLLLLSYAFETLDVMAVEFRTHWHNQASKEAITRLGAKQDGVLRNHKILKDGTVRDTVIYSIIDSEWPTVKQHLKFRLQQNQKL
>NZ_CP014782.1|WP_077755588.1|1716616_1717120_-|GNAT-family-N-acetyltransferase
MIVLETSRLILRHAALTDVEFILTLLNTPGFIENIGDRGVRDLCHAQTYLIDGPISSYQQNGFGLYVVELKSSGESIGLSGLVKRLVLDAPDLGYAFLPGFWGKGYAVESAQAVVCHSKDLSISRILGIVSPGNTASIKVLEKVGMAFDTTMVWEEDNSEVLLYRLT
>NZ_CP014782.1|WP_077751996.1|1717193_1717823_+|chemotaxis-protein
MSRKRSQVSQYYVIAAVVAAELNHTLAYCKQINLTASNAQAASSRVGNAALGFKALTGFIDDLACYTMKAATDINTLAHTASKMATDTARAAAALKHFEKAKLKAIDAKYAASMAPAVAQTVSNFNKLQKSFQALINQMEQQLHELKRNLRTANILASICRIEACRVDVANQATFNDVANKVDSVANLIRQRVDNAIALFDTTATQKAA
>NZ_CP014782.1|WP_077751997.1|1717961_1718705_+|MBL-fold-metallo-hydrolase
MKSQLIVETPTHQWIYFGRDPEKPDKIIDTNQYMLVTEKKALLMDPGGIELFAPMLANIVKHIPLEQLTHLFASHQDPDIISSLGLWDQTLPGAKLYSPWLWEGFIRHFGMHNISYEAIPDEGNRLVLDQVEVQFIPAHYLHASGNFHVYDPAARVLMSGDVGAALEDHNVDIFVDDFEAHIKKMSFFHQRWMPSNSAKNDWINRVRKLDIDYMCPQHGRIFKGEQVGQFLDWFEQLDVGQAISNAD
>NZ_CP014782.1|WP_077751998.1|1718828_1719377_-|NAD(P)H-nitroreductase
MDATELLLTRQSCPRLIAPAPDEAQLKVILDAGARVPDHGGLSPWEFIIAQGEGLNRLGDIFSQAVTENGADEAKQAKAKSMPLRAPMVIVVVAKPQPHGKVPEFEQLIAAGCSTMAMQQAAFALGLGGIWRTGELAFDKRVHRSLDLSDADQIVGFLYLGTQAIKAPLKPGKSGSEFARYL

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Crispr_ID: NZ_CP014782_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014782_3

2443219-2443353

Orphan

Consensus_repeat	Method
AGCCCTCCGTTCAAGCAAGGCAGATATACTTAGATGGTTATAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014782_3

>merge|NZ_CP014782|3|2443219-2443353|CRISPRCasFinder
AGCCCTCCGTTCAAGCAAGGCAGATATACTTAGATGGTTATAATTATTACGTCGCCAAAGATTCTTCCAAACGAGTTTAACCAACATAGCCAGCCCTCCGTTCAAGCAAGGCAGATATACTTAGATGGTTATAAT

>NZ_CP014782|3|3|2443219-2443353|CRISPRCasFinder
AGCCCTCCGTTCAAGCAAGGCAGATATACTTAGATGGTTATAAT	TATTACGTCGCCAAAGATTCTTCCAAACGAGTTTAACCAACATAGCC
AGCCCTCCGTTCAAGCAAGGCAGATATACTTAGATGGTTATAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014782.1\|WP_077755640.1\|2448160_2451253_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|169983
NZ_CP014782.1\|WP_077752511.1\|2447324_2448020_-\|DUF3313-family-protein	unknown	unknown	gnl\|CDD\|378712
NZ_CP014782.1\|WP_077752512.1\|2451255_2452530_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP014782.1\|WP_077752500.1\|2432751_2433663_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176155
NZ_CP014782.1\|WP_077752515.1\|2453979_2454552_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_077752508.1\|2444701_2445478_-\|outer-membrane-lipoprotein-sorting-protein	unknown	unknown	gnl\|CDD\|319986
NZ_CP014782.1\|WP_077752503.1\|2438521_2439385_-\|4'-phosphopantetheinyl-transferase-superfamily-protein	unknown	unknown	gnl\|CDD\|225002
NZ_CP014782.1\|WP_077752509.1\|2445812_2446205_+\|DUF3568-domain-containing-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_077752510.1\|2446281_2447310_-\|lipid-A-deacylase-LpxR-family-protein	unknown	unknown	gnl\|CDD\|378338
NZ_CP014782.1\|WP_077752507.1\|2443385_2444642_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226957
NZ_CP014782.1\|WP_149027261.1\|2431449_2432292_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_077752505.1\|2441164_2441896_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP014782.1\|WP_077752499.1\|2430531_2431314_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_077752502.1\|2437188_2438379_+\|alginate-export-family-protein	unknown	unknown	gnl\|CDD\|372583
NZ_CP014782.1\|WP_077752514.1\|2453407_2453863_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_077755639.1\|2439860_2441123_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_077752504.1\|2439521_2439692_-\|CCGSCS-motif-protein	unknown	unknown	gnl\|CDD\|200352
NZ_CP014782.1\|WP_077752501.1\|2434818_2436801_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224926
NZ_CP014782.1\|WP_077752506.1\|2441963_2443214_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226957
NZ_CP014782.1\|WP_077752513.1\|2452868_2453243_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP014782.1\|WP_077752511.1\|2447324_2448020_-\|DUF3313-family-protein	gnl\|CDD\|378712	pfam11769, DUF3313, Protein of unknown function (DUF3313). This a bacterial family of proteins which are annotated as putative lipoproteins.	6.64753e-18
NZ_CP014782.1\|WP_077752500.1\|2432751_2433663_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176155	cd08466, PBP2_LeuO, The C-terminal substrate binding domain of LysR-type transcriptional regulator LeuO, an activator of leucine synthesis operon, contains the type 2 periplasmic binding fold. LeuO, a LysR-type transcriptional regulator, was originally identified as an activator of the leucine synthesis operon (leuABCD). Subsequently, LeuO was found to be not a specific regulator of the leu gene but a global regulator of unrelated various genes. LeuO activates bglGFB (utilization of beta-D-glucoside) and represses cadCBA (lysine decarboxylation) and dsrA (encoding a regulatory small RNA for translational control of rpoS and hns). LeuO also regulates the yjjQ-bglJ operon which coding for a LuxR-type transcription factor. In Salmonella enterica serovar Typhi, LeuO is a positive regulator of ompS1 (encoding an outer membrane), ompS2 (encoding a pathogenicity determinant), and assT, while LeuO represses the expression of OmpX and Tpx. Both osmS1 and osmS2 influence virulence in the mouse model of Salmonella. In Vibrio cholerae, LeuO is involved in control of biofilm formation and in the stringent response. The topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.76289e-78
NZ_CP014782.1\|WP_077752508.1\|2444701_2445478_-\|outer-membrane-lipoprotein-sorting-protein	gnl\|CDD\|319986	cd16329, LolA_like, proteins similar to periplasmic molecular chaperone LolA, the outer membrane lipoprotein receptor LolB and the periplasmic protein RseB. This family contains uncharacterized proteins similar to the periplasmic molecular chaperone LolA, the outer membrane lipoprotein receptor LolB and the periplasmic protein RseB, all of which have similar unclosed beta-barrel structures that resemble a baseball glove-like scaffold consisting of an 11-stranded antiparallel sheet. There are five Lol proteins (LolA, LolB, LolC, LolD, and LolE) involved in the sorting and membrane localization of lipoprotein and are highly conserved in Gram-negative bacteria. LolA accepts outer membrane (OM)-specific lipoproteins that are released from the inner membrane by the LolCDE complex and transfers them to the OM receptor LolB. It is proposed that the LolA/LolB complex forms a tunnel-like structure, where the hydrophobic insides of LolA and LolB are connected, which enables lipoproteins to transfer from LolA to LolB. RseB exerts a crucial role in modulating the stability of RseA, the transmembrane anti-sigma-factor that is degraded during sigma-E-dependent transcription caused by bacterial envelope stress. Its structural similarity to LolA and LolB suggests that RseA may act as a sensor of periplasmic stress with a dual functionality, detecting mislocalized lipoproteins as well as propagating the signal to induce the sigma-E-response.	2.57424e-70
NZ_CP014782.1\|WP_077752503.1\|2438521_2439385_-\|4'-phosphopantetheinyl-transferase-superfamily-protein	gnl\|CDD\|225002	COG2091, Sfp, Phosphopantetheinyl transferase [Coenzyme metabolism].	1.11949e-32
NZ_CP014782.1\|WP_077752510.1\|2446281_2447310_-\|lipid-A-deacylase-LpxR-family-protein	gnl\|CDD\|378338	pfam09982, DUF2219, Uncharacterized protein conserved in bacteria (DUF2219). This domain, found in various hypothetical bacterial proteins, has no known function.	1.16545e-80
NZ_CP014782.1\|WP_077752507.1\|2443385_2444642_-\|ABC-transporter-permease	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	1.99988e-42
NZ_CP014782.1\|WP_077755640.1\|2448160_2451253_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|169983	PRK09579, PRK09579, multidrug efflux RND transporter permease subunit.	0
NZ_CP014782.1\|WP_077752505.1\|2441164_2441896_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	3.22134e-113
NZ_CP014782.1\|WP_077752512.1\|2451255_2452530_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	6.90881e-71
NZ_CP014782.1\|WP_077752502.1\|2437188_2438379_+\|alginate-export-family-protein	gnl\|CDD\|372583	pfam13372, Alginate_exp, Alginate export. This domain forms an 18-stranded beta-barrel pore which is likely to act as an alginate export channel.	3.86535e-07
NZ_CP014782.1\|WP_077752504.1\|2439521_2439692_-\|CCGSCS-motif-protein	gnl\|CDD\|200352	TIGR04101, 3-ketoacyl-acyl-carrier-protein_reductase, CCGSCS motif protein. This protein family, with average protein length about 58 residues, occurs in several marine bacteria, such as Shewanella benthica KT99, Marinobacter sp. ELB17, and Photobacterium profundum 3TCK. The striking feature is a C-terminal motif CCGSCS, which (perhaps coincidentally) resembles conserved core motif [LC]CGSC shared by two methanobactin precursors (see TIGR04071). There is no detectable conserved gene region for these proteins.	1.56594e-08
NZ_CP014782.1\|WP_077752501.1\|2434818_2436801_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224926	COG2015, COG2015, Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism].	0
NZ_CP014782.1\|WP_077752506.1\|2441963_2443214_-\|ABC-transporter-permease	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	9.28099e-38

>NZ_CP014782.1|WP_077752506.1|2441963_2443214_-|ABC-transporter-permease
MLINLAWRNLWRNKLRTSIMLSAMVFGLIGVVTMMGFMTGMYGNMIDNAIAWQTSDLQVHNRQYVDNPELKLLIHSPENVTKALASMPEVKAWSSRFLVDGMVASARSSRGIRINGVDIDDEAKVTPLASKLVTGTWLPIEGRHPVLVSQKTADRLKLRLGSKVVLTSSNVEKDVTGAAFRVAGIFKTPSTGFDDGNLYVRRGDLMKMAGLDGVHEIAVVLNTTSSKIGSHFSNELALQVKAKLEIANKGNLNSIRDWQKIQPMLATIISQIGVSNAIVLAIFMLAMGFGIINIMLMSVFERTREFGVLMAVGMQKHKVFTLIILETGLLGVTGGLLGVCGASILVNILQITGIELGGMAEGVGALGVDTTLYPQVSVLEYFSTFVTVIVVSLFAALYPARQILKLSPVDAMAEKH
>NZ_CP014782.1|WP_077752505.1|2441164_2441896_-|ABC-transporter-ATP-binding-protein
MSIQTTQLCKTYNQDTDFPVHAVKALDLNIEQGEFVAVMGPSGSGKTTLLNMISGIDEPTSGTVIIDGNDICQLSDKDLIGFRRDHVGFIFQDYSLLPVLTALENVEFVMQLQGHSEDECRARATDLLKRVGLGEHLHKVPSKLSGGQQQRVAVARALAPRPRFVMADEPTANLDAASTSELLDIMQQLNENEGTTFIFSTHDPRVIKRARRVIVFEDGQLTEDRVQEPVQETVQLRAQEQVQ
>NZ_CP014782.1|WP_077755639.1|2439860_2441123_-|hypothetical-protein
MLTSSILLLHPATASTIPGLEPAKNWDLDGYVKYMGTISYPDSASDSVDHLLHQRFNFEYRFDSELRFNASMRNRVFYGDSAKIPGYGDLIGLDPGYWDMSATWLDTEGWVGNTQFDRAYIDWKPSEFAGGDWQARVGRFRINWAMSTLWNPNDIFNAYSIYDFDYEERSGADAVLISRKLGFASSLDFVYNPNQDSKLTSYAARYLTNYASWDLQFLIGKSGFDHVLGAGFSGDIGGAGFRGEVSYFEPQYDYWPIEEPVPYDSIANIPTGINPLANGASLSPRAQRLEATSVATLEMDYSFTGARNWMVRGSVLHISEPTESDSALLYLNIPLTARTLSFTHWTSYLELGFDISPLSRLTFSNSFYDDGSYFYGANMSYSLANEWTMLMVLQRFDGSSGSLFSQSASTLGFVQLKWSF
>NZ_CP014782.1|WP_077752504.1|2439521_2439692_-|CCGSCS-motif-protein
MAISFFKKKSAAEKNTQTELESIQNLKQGASYADEKVEADNKLKHGESGVCCGSCS
>NZ_CP014782.1|WP_077752503.1|2438521_2439385_-|4'-phosphopantetheinyl-transferase-superfamily-protein
MSQSISALEFGKEKLSLFFCPLEHELLTSEQADSIRHWLPEDEQIKVARYIQLSARDKGLMVRGFLRGILSLVAKETSTNGESISPADWCFEYGKKGKPTLVSEQQVQSGLHFNISHSGDWLVVAVMGKAEHNNISELGVDIERCRQTTNIYPILNHYFTNEESEALLALPNDKQRERFFDLWTLKESYIKAKGLGLALSLKSFSFDFSAIKKKKLDLFAKDTCINVLPIFEEIQLNLHRGESVKLADTWSVLFGKLNEDYRFAVSVDVDSKLDIHARKLEITELLK
>NZ_CP014782.1|WP_077752502.1|2437188_2438379_+|alginate-export-family-protein
MKVRALTLAILASLSASAVATDSVDPLKKAFIDDSKINLQFRLRYEDADVDTVDNQNQTTLRTRLTYQTGDIYKLFALTEVDDVRSTDNEPLIGDYEYTQINQAFIGYRGPAETLVKYGRQRILLDNQRFVGGVGFRQNEQTYDAFSVKNTAIENLTAYYSYINNVNRIFSEDSGKDEHKNKTSLLNVNYKASEIANITGYAYLIDNMDVAAFSSDTYGIRATGKLKLDAVKLSYEAEYAQQSEGENNPTSYTANYYKLGAGVGFEGFGAKIGYEVLGSDDGNAGFITPLATLHAFNGWTDKFLFGGMGNWENGLVDAHVVLTAKVAGLKLLAKYHKFDSDYGDIDMGKEWGIAATYPFAEHYDVGVKYASFSGADAGYGFSNDTDKLWLTLQAKY
>NZ_CP014782.1|WP_077752501.1|2434818_2436801_+|MBL-fold-metallo-hydrolase
MSASIIAVLSFNSLAAQHEHESITVSYQGKDATAHTAKANNDFAKQLNFSDTAAFDQASKNLIAKLDDKAAAILRADFEYISGKAPDTVNPSLYRQAKLNMVADGLYKVREGIYQVRGTDLANLTLIRSDHGWIAYDVLLTKEAAKISLEFAMKNMPEGGDLPVVAMIYSHSHVDHFGGSRGVQELYPNVKVYGSNNITKEIVDENVLAGNAMSRRVAYQYGATLGINSHGIVDAALGKGLSKGEITYVKPDYTLNSKGKWEALTIDGLDMIFMDASGTEATSEMTTYIPSMKALWTAELTYQGMHNIYTLRGAKVRDAQKWSKDINAMIDAFGGEVETLFSAHTAPIWGNGEINDFLRLQRDNYGLIHNQTLRLANQGVTIQDIGDAIQDTIPKAIRKSWHTNGYHGSYSHNAKAVYNMYLGYFDMNPANLNPLPTHPEAAKFVEYMGGADAVVKRAKSDYSQGEYRFVATALNKVVMAQPGNDQARQLLADTYEQLGYQSETAGWRNIYLTGAQELRIGIQPGAPKTASADVISEMDMPTLFDFLAVKIDSIKAAKQGKVTLNVVTPDDNRILYVEMSNGNLNNIEVTKVKQADATLTINKSDVTRILMGQTKLKTLLADGTAKLSGDKTTIDKISSSLVEFKTDFEIVPLKPEQAKN
>NZ_CP014782.1|WP_077752500.1|2432751_2433663_-|LysR-family-transcriptional-regulator
MAQQKQFDVNLLRVFLAVCRTGSYTLAAEELDLTQPSVSNAITRFKAVIGEELFVRAGRNIKPTAMANYLYEQLNDSFTNIEQTISGLEGFDPITSERQFVILAGDVVTHFLQPALEEIVKDLPIEIIFREPPDYDEDIMEKLYQEQADLVIDMQLPMDLRFEKQLIMSETPVCVVRKNHPRIGDEISWDEYFDERHVVIKMRRFNLTAVDLLTDEVLPTRKVHSIKSSLLTAFDTISAGEAISVSPKRYVEDYLEMFNLKLVQPPFKMRNIEIEMVWKRKHNKNPAHIWLRDKICEVVGNSI
>NZ_CP014782.1|WP_149027261.1|2431449_2432292_-|hypothetical-protein
MNFKKTSVATALMSVLFLVGCSSTSSTGTDNTDPDFSNPGLENPIEIPGTPANPIEGVPDNELPPIEDVPSNELNHFSITEDGYIKMNGELLGHYDDGKLYVGGKEYATVEPVKSSGKNEYLITGNDGLQFHVDVTNGVISVDWAKSTVDGGWDVTKPPVDLPPTDDVPDFGINHISINDNGYVFNNGDIIGHIDSEGVIHKGTDEVGKVHQIGNSGVYVITRDDSNAFYFANVSENGVVHVIKKFDIEKAASKLTTSQKSNIKSKVQAAKARVQSQLKR
>NZ_CP014782.1|WP_077752499.1|2430531_2431314_-|hypothetical-protein
MNKFFIFAVYGLAGGFSANIYATSIANDIELIFPPKGIVIEQGVEGDPLYKSVGVDVKIQDGEAVYTLNASFDLGETWRVFGEYDSNEFWEVGVGKSFYTSLMFTEVTAKANSAGYSAGVFAGIPVSETVILMADTNYNWYTDEFRLGFELGDDYQGELGFTPSDTIDIMLGVSWSAHQRLNVSYSYNHVYDTRGGNSWVTLPELGIHKQCFLDINCNKGNFNYHDITFTTQVWKFSPYFTYTYFSDRENFYEFGLSFKW
>NZ_CP014782.1|WP_077752507.1|2443385_2444642_-|ABC-transporter-permease
MLLKLAWRNLWRQKRRTILTACALALALILSLVMRSTQEGSYANNIENSARFSTGLIQLQDPNFAETQSIDDLLPQSDAFIDIAKQLPDVERVLPRIESFSLAAAADKSKGVMVLGVMPELEDDYSGITSKLVAGRFLKQDDKQVLIGQGLAEYFELTVGDEIVLYGQGYRGQTAAGLYTIKGILHFPVSGLDNQLVYMPLPLAQTLFSTNKQVTAWVLHTKNLSQIEQTVNRLKQVYSEQGKAAGFTDKVNVRDWKALSPEMAQQIAMDKAGGIFMMYLLYGVVGFGLFATILMMTLERQREFGVMLATGLLRPKLLALVMLESGFISLLGIVFGLLVATPILVWFNLHPIQLTGETAQLMLDMGWEPIIPMMLAPWLFIDQILIVLVLMLLCLIYPLWRVYHLDLVTALKGGDHAH
>NZ_CP014782.1|WP_077752508.1|2444701_2445478_-|outer-membrane-lipoprotein-sorting-protein
MPFSLKKNVKIHLCLTLLLSTLLPSFVLAKSATEIVAESDKQMRGDASYTVSTMNIIRPDWIRSMSMKSWTKGQDLSLVLVTAPAKDKGSASLKRQKEMWNWIPSIERVVKIAPSMLSQSWMGSDFTNDDLINQSSIVVDYDHRLVEAQVIDGEASYVIDAIAKPDAPVVWSKVRLWISKDSYLQRKVEFYDEFDDLVNTMETFDIKKMGGRLIATRMTMTPADKPGNKTEMLTHEAQFDFDIGDEFFSQSQMKALRD
>NZ_CP014782.1|WP_077752509.1|2445812_2446205_+|DUF3568-domain-containing-protein
MKKLVIMLLISLSVSGCAGIATIGAVMYYKSQNHEVASVDIEAPAKNVYQVAIKTIQGKPNVTIVNKNDSAMQLDILKNETSGSIKVTALNSKLSQLTIVSDLTADNETTPLSAVLKICNELKVKCEQTK
>NZ_CP014782.1|WP_077752510.1|2446281_2447310_-|lipid-A-deacylase-LpxR-family-protein
MLKYIIAISLTLPFFILTDANAADVLSPSSSWGQFTFENDAFGVLEPSDDGYTNGVAYSWGEAQVNSFEDVNIPAWLHYISDWTYINRGEDGSYTVSYSIQQGMYTPTNLEEESLIVDDRPYAGVLIWQAKLRQFDKNVATSLIIDVGVVGPAALAEPTQTAIHSVISATMANGWDNQINNEPVFRVGSEYVKRLADFPLSDSIVSDLNFYAQAGIGNLRSDVSMALIFRLGSGLDETFSLVSPTASHSANPYTLVSGHGFYWQVFMSLHGRYVLNDITLNGNTFEDSHSVDLIHEQNQFSLGFAMRWESWGVLFSTLRGSKQFDDQQDDTNFAAVSISYFY
>NZ_CP014782.1|WP_077752511.1|2447324_2448020_-|DUF3313-family-protein
MKKIIHLTLALVLVLLTGCSSLTPTATDLATTDALTNKPLHEVDYDTDKKGVQWVSKSIVPHYYKALLVPKVELKRDSTQDKQIPESVLEKLANEITGHLRQEISPSMKLVDKAGENVAQVNIRISRATTEPEDLKLTEIIPIGAVIGSVKMALGTRDKNVRIIIETQIVDSVTLKPLAERVAVIKASGVLENSSSHLNYEQIRTNVDNFVQETRMFIFSAAYEAHQDALK
>NZ_CP014782.1|WP_077755640.1|2448160_2451253_-|efflux-RND-transporter-permease-subunit
MKFTDIFIKRPVLSLVLSLILLVLGFKAYDMLQVRQYPKLETGVITISTQYPGASSSSVQGYVTQPLQAQVAQAEGIDYMTSNSSLGKSLITVYLKLDYPSGKALTEILSLVQQVKYRLPTGVQDPSILKSTSQSPILYLSFSSDNLATEQISDYISRVVKPTLSTVNGVSKVDILGQRDFAMRIWLNPTKMAALGLTASDVQNAIKGNNTVSAAGKIKDEYIEVDINAHTDASSVADFNNISLKEADGRLIHLRDIATVELGANSYDAQVNFNGKPAVLTAISNTSNSNPLTVVADVYKVLPDIIDSLPEGMHGSVVYDSTQFITTSIDEVAKTLIEAALIVVIVIFAFLGSMRAMLIPLVTIPLSLIGSLFFMLILGFSINLLTLLAMVLAISLVVDDAIVVVENTFRHLEDGLSPVQAAMVSAREIAGPVIAMTITLAAVYAPIGFMGGLTGKLFTEFAFTLAGSVLISGFIALTLTPMMCSKVLSKSVLEGKLVKRVDSVMAGITQKYTRLLSLVLDNRAMVWPLAGTILLALVFMFTHTSSELAPQEDQGVVMMMGKGPVQANTDYLAHFTQSLTQVVNQYPEKQMDMMVNGYQNNHTFFGLTVLKDWSERQATAKEVMQRFQADSKTLPGVQIYTFSPPDLPGTPQGLPFQMILKTPTGNYKDLYQYAEKLKDYAMKSGKFIYVQNDLNFSKPQIEVIINRDKAALMNVSAQDIGVVLSRYLSEGFINYFSLDGRSYQVITQVPQEDRNTATDLNQYYVESQSHEMVPLASLVTITKSVQPSNIDQFQQLNSAMIEAKMMPGVSIGEAYKVMEQGAKQILPQSYSVDSSGQLRQYLQEGSSLVATFFLALIIIYLVLAAQFESFRDPLIVLTSVPLSIFGAMLPLYFGVDTLNIYTEVGLVTLIGLISKHGILIVEFANQLQRETSCSKYEAALKSASVRLRPVLMTTAAMVIGVVPLLIASGAGAQSRFSIGLVITVGMSIGTLFTLFVVPTVYTFLAQDHKKQQEIETGDAQRSEVAIGLSE
>NZ_CP014782.1|WP_077752512.1|2451255_2452530_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MSRLVSEEVSKNAFGKVTGKMSKAFVIATFSLIAIILLLVFGFYFFKQYMIKTKLADFSFPPVAVTSVSTHKEDWLEEIKAVGHVTANQEVNITPQLSGQIKRIAFSSGEYVEKGQLIVQLDTSLLKANLKTSLANLMLAELEYQRQLKLLKTHSTSQDAVDSSFAKLSTSQADVEYIQTQMDFMAIKAPFSGRLGIRNVNLGDYVQPGTSIVELQNQDNQFIDFSIPEAYLSKVALKQQVHFSTDTYPDEDFIASITAIDPMVDSVSHNLDIRAQVLDSRVPLISGMYVEANIQSNHMAHVIPLPSIAVTYSLYGDAVYVLKPETKFASKEHEGMFEYQVERRAVQVGRKRGGNLGILKGLKVGEQVVTSNQQQLKPGSKVLLNNSKAFAVAANSDKTSVGQAQFSPKRVSSNSAEVNHSQGE
>NZ_CP014782.1|WP_077752513.1|2452868_2453243_+|hypothetical-protein
MINRKYLTSVFIAACLSVSGCISPPQVQEEPTPFNSTASMKKHLQLTTAQIAKIKTINQKYNAKSASLASQDLRFLERKRMTKQLEKTRNMELQQVLSPQQLEIFQQEIKKLRRDKAKKIMWHI
>NZ_CP014782.1|WP_077752514.1|2453407_2453863_+|hypothetical-protein
MKKLAITLLALTSLTASAANLDSNSKDLKIFNKSMSQLEQVDIKNSIYISTASTHFDDITRETEYMYEFTSVDRVSDKQAAQMKLNKAKSYYIYGISGLKNLTSSLSKRLSKDKPDYFSASLLQGNKYYNGFSEYIAKVTEYSQALPPILN
>NZ_CP014782.1|WP_077752515.1|2453979_2454552_+|hypothetical-protein
MPPLLAKSSTSIIFLFAKIGAISLLLFAALTPNVFAADSYASVSYGTVQEANEIANPWYASATYGYTIKMIGAEKLVRIESQTNKIMQGDCVAIDSSDKGKSVRRTNNSYCAIKVNDTSSDNETAIKSETSVKQAKTEHKNSPKKASNNSKSTEISEACQSAIDLMKQKDFGPERRKARQHAYQVCEKPN

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Crispr_ID: NZ_CP014782_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014782_4

2812869-2812960

Orphan

Consensus_repeat	Method
ATTTACGGTTACTCAATGAAAATCGGTATTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014782_4

>merge|NZ_CP014782|4|2812869-2812960|CRISPRCasFinder
ATTTACGGTTACTCAATGAAAATCGGTATTAGTTAGCCTCCATCAATTTTACTTAACACATATTTAAGGTTACTCAATGAAAATCGGTATTA

>NZ_CP014782|4|4|2812869-2812960|CRISPRCasFinder
ATTTACGGTTACTCAATGAAAATCGGTATTA	GTTAGCCTCCATCAATTTTACTTAACACAT
ATTTAAGGTTACTCAATGAAAATCGGTATTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014782.1\|WP_077752768.1\|2815779_2816262_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|273970
NZ_CP014782.1\|WP_077752770.1\|2819330_2820833_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_077752761.1\|2804740_2805106_-\|Hpt-domain-containing-protein	unknown	unknown	gnl\|CDD\|236842
NZ_CP014782.1\|WP_077755658.1\|2801822_2802737_-\|hydrogen-peroxide-inducible-genes-activator	unknown	unknown	gnl\|CDD\|176103
NZ_CP014782.1\|WP_077752766.1\|2813692_2814676_+\|cobalamin-biosynthesis-protein	unknown	unknown	gnl\|CDD\|234919
NZ_CP014782.1\|WP_077752769.1\|2817170_2817584_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_077755660.1\|2821196_2821478_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_077752767.1\|2815147_2815777_+\|trimeric-intracellular-cation-channel-family-protein	unknown	unknown	gnl\|CDD\|182564
NZ_CP014782.1\|WP_077752757.1\|2798559_2799096_-\|RNA-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|234820
NZ_CP014782.1\|WP_077752762.1\|2805280_2806207_-\|TIGR01212-family-radical-SAM-protein	unknown	unknown	gnl\|CDD\|224163
NZ_CP014782.1\|WP_077752771.1\|2824881_2826066_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227407
NZ_CP014782.1\|WP_077752764.1\|2811274_2812684_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|273553
NZ_CP014782.1\|WP_077752758.1\|2799798_2800473_+\|DNA-mismatch-repair-endonuclease-MutH	unknown	unknown	gnl\|CDD\|179923
NZ_CP014782.1\|WP_077752760.1\|2802920_2804615_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP014782.1\|WP_149027232.1\|2822793_2823950_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP014782.1\|WP_077755659.1\|2814773_2815151_+\|DUF2721-domain-containing-protein	unknown	unknown	gnl\|CDD\|378544
NZ_CP014782.1\|WP_077752759.1\|2800595_2801663_+\|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636
NZ_CP014782.1\|WP_077752772.1\|2826087_2827242_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_077752763.1\|2806734_2811183_+\|glutamate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|236968
NZ_CP014782.1\|WP_077752756.1\|2796252_2798478_-\|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl\|CDD\|182937

Protein	Function_ID	Function_description	E-value
NZ_CP014782.1\|WP_077752768.1\|2815779_2816262_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|273970	TIGR02096, putative_cyclase, conserved hypothetical protein, steroid delta-isomerase-related. This family of proteins about 135 amino acids in length largely restricted to the Proteobacteria. This family and a delta5-3-ketosteroid isomerase from Pseudomonas testosteroni appear homologous, especially toward their respective N-termini. Members, therefore, probably are enzymes.	2.43276e-08
NZ_CP014782.1\|WP_077752761.1\|2804740_2805106_-\|Hpt-domain-containing-protein	gnl\|CDD\|236842	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional.	1.7031e-28
NZ_CP014782.1\|WP_077755658.1\|2801822_2802737_-\|hydrogen-peroxide-inducible-genes-activator	gnl\|CDD\|176103	cd08411, PBP2_OxyR, The C-terminal substrate-binding domain of the LysR-type transcriptional regulator OxyR, a member of the type 2 periplasmic binding fold protein superfamily. OxyR senses hydrogen peroxide and is activated through the formation of an intramolecular disulfide bond. The OxyR activation induces the transcription of genes necessary for the bacterial defense against oxidative stress. The OxyR of LysR-type transcriptional regulator family is composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The C-terminal domain also contains the redox-active cysteines that mediate the redox-dependent conformational switch. Thus, the interaction between the OxyR-tetramer and DNA is notably different between the oxidized and reduced forms. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.08035e-76
NZ_CP014782.1\|WP_077752766.1\|2813692_2814676_+\|cobalamin-biosynthesis-protein	gnl\|CDD\|234919	PRK01209, cobD, cobalamin biosynthesis protein.	1.84558e-30
NZ_CP014782.1\|WP_077752767.1\|2815147_2815777_+\|trimeric-intracellular-cation-channel-family-protein	gnl\|CDD\|182564	PRK10578, PRK10578, hypothetical protein; Provisional.	4.48863e-76
NZ_CP014782.1\|WP_077752757.1\|2798559_2799096_-\|RNA-pyrophosphohydrolase	gnl\|CDD\|234820	PRK00714, PRK00714, RNA pyrophosphohydrolase; Reviewed.	4.0855e-105
NZ_CP014782.1\|WP_077752762.1\|2805280_2806207_-\|TIGR01212-family-radical-SAM-protein	gnl\|CDD\|224163	COG1242, COG1242, Predicted Fe-S oxidoreductase [General function prediction only].	5.57457e-134
NZ_CP014782.1\|WP_077752771.1\|2824881_2826066_-\|hypothetical-protein	gnl\|CDD\|227407	COG5075, COG5075, Uncharacterized conserved protein [Function unknown].	1.01173e-05
NZ_CP014782.1\|WP_077752764.1\|2811274_2812684_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|273553	TIGR01318, glutamate_synthase_small_subunit_gltD, glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.	0
NZ_CP014782.1\|WP_077752758.1\|2799798_2800473_+\|DNA-mismatch-repair-endonuclease-MutH	gnl\|CDD\|179923	PRK05070, PRK05070, DNA mismatch repair protein; Provisional.	2.54766e-152
NZ_CP014782.1\|WP_077752760.1\|2802920_2804615_+\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.29449e-59
NZ_CP014782.1\|WP_149027232.1\|2822793_2823950_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	8.28073e-64
NZ_CP014782.1\|WP_077755659.1\|2814773_2815151_+\|DUF2721-domain-containing-protein	gnl\|CDD\|378544	pfam11026, DUF2721, Protein of unknown function (DUF2721). This family is conserved in bacteria. The function is not known.	7.77932e-27
NZ_CP014782.1\|WP_077752759.1\|2800595_2801663_+\|adenylate/guanylate-cyclase-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	2.01505e-23
NZ_CP014782.1\|WP_077752763.1\|2806734_2811183_+\|glutamate-synthase-large-subunit	gnl\|CDD\|236968	PRK11750, gltB, glutamate synthase subunit alpha; Provisional.	0
NZ_CP014782.1\|WP_077752756.1\|2796252_2798478_-\|phosphoenolpyruvate--protein-phosphotransferase	gnl\|CDD\|182937	PRK11061, PRK11061, phosphoenolpyruvate--protein phosphotransferase.	0

>NZ_CP014782.1|WP_077752764.1|2811274_2812684_+|FAD-dependent-oxidoreductase
MSNDFQFIEVDRIDPIKHPVKKRATQFIEIYQPFAQSQVKEQSDRCLDCGNPYCEWKCPLHNYIPNWLKLAKQGRILEAADLVHETNTLPEICGRVCPQDRLCEGACTLNEEFGAVTIGNVEKYITDTAIEQGWRPDLSKVVARKERVAIVGAGPAGLGCADILARNGVQAVVFDKNPEIGGLLTYGIPAFKLDKAVMATRRTVMEGMGIEFKLGVTIGKDLPFDDLVNDYDAVFIGMGTYTAMKAGLPGEDAQGVHQALPYLIGNTHHIMSTQDTESPYLNLKGKRVVVLGGGDTAMDCVRTAIRQGAKEVTCAYRRDEPNMPGSRREVQNAKEEGVNFLFNRQPVSIETQDGQVTGITCVETQMGAADTSGRRRAEAIEGSEALLEADAIIIAFGFQPSPASWLKDHNVDLDQWGRVVAPKAADNPFQTTNPKVFAGGDMVRGSDLVVTAIAEGRDAALGILNTFES
>NZ_CP014782.1|WP_077752763.1|2806734_2811183_+|glutamate-synthase-large-subunit
MSLYHPSFERDNCGFGLIAQMDGEPSHRIVRTAIQGLDRMKHRGGIASDGRTGDGCGLLMQLPVKFFEAVAAENDWHLSRKFAVGVFFLNQDDKLAEEAKQLLEHELEKETLSVAGWRKVPVNSDVLGPIGKASQPQIYQALINSPIGWREKDLERRLYMARRRLEQQLTQDKEFYVASLSGQVIVYKGLMMPADLPEFYLDLADIRLQSSICLFHQRFSTNTSPKWPLAQPFRYLAHNGEINTITCNRQWARARAYKFNAPLLPDLQQAAPFVNETGSDSSSLDNMLEMLLAGGMDLYRAMRLLIPPAWQSNPEMDEELKAFYDFNSMHMEPWDGPAGIVMTNGRHVACAVDRNGLRPSRYVITKDRILTLASEVGIWDYAPDEVVEKGRVGPGELLVLDTLNGQLYSSFEIDNDLKRRHPYKEWMAKNSRTLIPAEDLPNEAQGVSEFNDDQLLQYHKQFGYSREELQDVIWVLAQKGEEATGSMGDDTPMAVLSKKSRTIYDYFRQKFAQVTNPPIDPLREKHVMSLATCVGREQNLFNETTGHAYRVMFNSPVLLYSDFNQLMALDSMYYRANIIDLNYDLSEGLEKAITRICDESERLARTGTTLLILSDRATDKSKQVIPAAMAVGAIQHVLVNKSLRCDTNIVVETATARDPHHFAVLLGFGATAIYPYLAYESICALAKKSDIADTRQLMLNFRQGIDKGLRKIMSKMGISTVASYRCSQQFEAIGLATNVVDLCFNGVISRIEGANFDLLEQDQVKLHKVAFQAHQPLSQGGLLKYVEGGEYHSFNPDVVNTLQACLKDRDYPTYKRFTELVDKRPVATLRDLIEVKGELAAVEVDTVESATSLYPRFDSAAMSIGALSPEAHEALAVAMNRLGGRSNSGEGGEDPRRFNTEGNSKIKQIASGRFGVTAHYLVNAEVLQIKVAQGAKPGEGGQLPGDKVSVEIAGLRNARPGVTLISPPPHHDIYSIEDLAQLIFDLKQINPKALISVKLVSEPGVGTIATGVAKAYADMITISGYDGGTGASPITSVKYAGSPWELGLAEVHQSLVKNGLRHKIRLQVDGGLKSGRDVIKAALLGAESFGFGTVPMIALGCKYLRICHLNNCATGIATQNKQLRNEHYHGLPERVMTYFEFVAREIREEMAALGVTEFEQLVGRSDWLHALEGETPKQNGLDLSAILYTPEVPEGSAVTWKELNPTSDIGVLNQKILAKCKNAVEQGEELSTRFEIGNVDRSIGATLSGFVATTVGKEGAKSPIKLQFNGSAGQSFGVWNSPGIELTLCGDANDYVGKGMSGGKITIHPPLGSNFQSERSSIIGNTCLYGASGGKLFASGIAGERFAVRNSGALAVVEGLGDNGCEYMTGGIVVVLGKTGVNFGAGMTGGFAYVFDRFGRFNRRVNTELVDTQKLDSPIHQQHLKGLIEEHLAETGSEHAKMLLNDFENWLGCFVIVKPKSVPVSDLLRLEQKQPELKVIAG
>NZ_CP014782.1|WP_077752762.1|2805280_2806207_-|TIGR01212-family-radical-SAM-protein
MGLDHYVNTFGVACKKQFGEKLKKLTIDAKFTCPNRDGTLGKGGCTYCNVASFSFEHGIELSIHEQLKLGRERARGRATKYIAYFQAYTSTYDEYRVLKAKYDEAISDPDIVGLCVGTRPDCVSDEVIDLLISYQNRGIEVWLELGLQSANDKTLKRINRGHTYNDYRDTVLKARGKGIKVCTHLILGLPGESHQDYLSSLDAVLSTGVDGLKLHPLHIVEGSTMAKAWRHDRMSLLTIEDYAYSVGELIRYTPKEIIFHRVTAYAKKPMLLAPDWCAFRWDGLVAIVNDLEDKGGQGSYLNFKENLF
>NZ_CP014782.1|WP_077752761.1|2804740_2805106_-|Hpt-domain-containing-protein
MATAEIESILDLNTLEQYCSAIGAGTLLKSVVLFEQLMPEYVGNLVNAKEAQDKDTLCSEAHKFKGAAGSVGLKRIQQFAQLLQHGEEAAWATEHDVWLQAIVEHASQDLAELKQYLESKA
>NZ_CP014782.1|WP_077752760.1|2802920_2804615_+|GGDEF-domain-containing-protein
MRLALAYILMLVSVATVQAHAHVNLSEKSREMPTSMLFEVSSPEQLSKIKSLLPDDYLPNENLLPKLLTLKNETARARKWTLTRPVNSFDKQLANYTRYENEGFSLLPSQTLNWPAKIVIQSLTIPPYQQVEVLLDTRVLPTQIWSHTWLTHRLNQYSQYSCLMLGAIFSIVLLQVIMGLLKNNANLLLLCFQLSFLVSLSHELGLVEILIPSISSRAIGFFLPILSLLLFIHMRRKQNQEMNNLVHSINVTLYGTAILALLVTTILTQVSLPILESILPTYLAITLSTLVILCGYTFIRFSNVHHLCDFGIIVFMALFCIILNDIASILDKMLLYLPVLGINLLCFVSAQISESKNLSNNKPLANVQKVTLERKFKELEMNHRLLQEKNAIDFLTGLKNRQFFDERYHQELSRSARENTPISLIIIDLDHFKRVNDHYGHQVGDEVLKMVAKRFYYALNRPADAICRYGGEEFVILLPNTHIQGAAHLAQQLSLTISSKPILTSRGDISITISQGVACVSHQADFEEMKLLSIADEALYRAKSLGRNRFELARLEPFIVKEQA
>NZ_CP014782.1|WP_077755658.1|2801822_2802737_-|hydrogen-peroxide-inducible-genes-activator
MKHLPSLKNLFYLVNLHQEQNFNRAAKMCHVSQSTLSSGIQNLEEQLGHQLIERDHKSFIFTAIGEEVVQRSRKLLTDVDDLVELVKHQGEPMTGDIRLGCIPTIAPFLLSKVVKHCQSTYPDLTLLLKEDTTERLLDALGKGELDLLLLALPVDTSGFHSMKVGIDPFKLVVHEELTDVIHEPLDYDSLPDESIFLLQAEHCITGHAVSACQLANSAKVNPFAATSLHTLVQMVNSKLGTTFLPQMAIDAGILNDTELKVMQPPGEAPYREIGLVWRQTSSRILTFRTLGLAIQNILEQSDIK
>NZ_CP014782.1|WP_077752759.1|2800595_2801663_+|adenylate/guanylate-cyclase-domain-containing-protein
MRARIQAKKLIFAISAWGIAMAAFVFFRYAQAPDLPQWAVGTADLATLAIYMGIIFGSLHWMSNLIADFSAINRLPYLFSVIFKGLFLLLGATTLAYMTQFLNMWAIENHMSTLRQMLTAHILYSPSFQALIVYLVVVRVSLAFIEQMALLVGPRVLLNIGLGKYHKPRYEQRLFLYLDMVASTTHAESLGDYRFSRLIQDSFSLLSDTVVNNEAEIYRYMGDAVLIHWPLEHGIKNDRSFNIYYEFSQQLSWQRQYFEEQYGFVPKFKAAAHCGQVVAAVVGVQKQEISFFSDVLNTLARLQDQCNPLGQRMLISGSLASRIDIDTSAYKINSLGPIKLKGKQHSTEVFSVIPK
>NZ_CP014782.1|WP_077752758.1|2799798_2800473_+|DNA-mismatch-repair-endonuclease-MutH
MKTTTPSPKTIEELMQRANNMAGLTLGQVASSHGFTTPADLRRDKGWVGQLIEYELGALAGSKPEQDFLHLGVELKTIPIDNKGKPIETTYVTVAPLVNIQGLTWEKSIVYHKLQTVLWVPVQGNRDIPVAQRQIGTPILWSPTPDELDLLKQDWEEIMEFIAMGQVQQLTARHGEVLQLRPKGANSRSVTQSIGKDGSKKLTNPRGFYLKIPFTQSILERFFS
>NZ_CP014782.1|WP_077752757.1|2798559_2799096_-|RNA-pyrophosphohydrolase
MIDSDGFRANVGIIICNRFGQVMWARRFGQHSWQFPQGGVDEGETPEEAMYRELYEEVGLKPEHVQILTSTRSWLRYRLPKRLIRQDSKPVCIGQKQKWFLLQLKSGESAIDLNACGHPEFDDWRWVSYWYPVRQVVSFKRDVYRKAMKEFAPTALPFQSRESHFGNSQSNKRRNRRR
>NZ_CP014782.1|WP_077752756.1|2796252_2798478_-|phosphoenolpyruvate--protein-phosphotransferase
MLKMLRDITQAVAAARDLHSALDLLVSRTKTAMTTQCCSIYLLEGEQLVLSATDGLLNSAVGQVRMPLSEGLVGLVAEREEPINLADAQQHPRFKQFEEAEEASFRAFLAAPIIYQKRILGVLVVQQADTRLFSEGEEAFLMTLAAQLAMAIRNLRKKAEAPDLLHFKGTSAANGIAIAHALVIGGQIELSQPEVKITDIEAEVTRLSHAIEACKDTLSSLSQRFEQEEDHEVVSIFSALQLLLDNASLGGEYIKEVREGWSAISAVSRVSLRYIDQFTQMQDLYLKERAGDIRDLGLRVLRLLIEPERMGFEPDVPVILVTKEADATMLAEFPRHKLVGIVTEQGGVNSHAAILARALGVPAIIGVEGVLTAGIDKKLLIINANRGQLLVSPAPPLIAEYRNLISAEKALQNRYAQELTLPAETIDGKRIHLYLNAGLLSSLESEIAEGSDGVGLYRTEIPFMLHQRFPSESEQVKVYRQVLEIACGKPVVMRTLDVGGDKPLSYFPINEENPFLGWRGIRLSLDHPELFLVQLRAMIHAGADSDQLHILLPMVSNLDEIDQAITYLEQAFFELKGDLGKEIVRPKIGIMIEVPALLYQLAEVAKRVDFVSVGSNDLTQYMLAVDRNNPRVSTLYDCYHPGILRALKRARFDCWQYHLPVSVCGELAGEPIGVILLVAMGYDQLSMNQGSLARINYLLRRVSHSDLSELLEMALTLTSGQEVRELVREYFESRQLGAILN
>NZ_CP014782.1|WP_077752766.1|2813692_2814676_+|cobalamin-biosynthesis-protein
MVPEFAQQLLNDSSFYEGTMILLVSLLLSRLAPLPREFQPIVWFGLLANELAKKVAHSNRSPSQQVIAGSMAAILLILPFWAIIYFLLQLAAFPWFFEFIILYLCLNDDNFKQVAGEVRQALSREDKTLARQLLSLWLYRDTKQLSSVGISKATIEKLVTTPVYGTVSTILFFSIGGAPLVLVARMIKKLELCWPAINPKFKYFGQPVNLLSAALFIIPSWLWNFTLAIQGGPKSILLLFKPLSNNGPLYNCINTCAIAASVLKVELGGPMKFNNQRVAVTKLIYGPKPDSHSIAAAIKLTSTGYTLWLSFLILIPLIWAALRYLQT
>NZ_CP014782.1|WP_077755659.1|2814773_2815151_+|DUF2721-domain-containing-protein
MHVSLTTPALLFPAISLLLLAYTNRFFALAALIRSLSSDGKPVHYEQLRNLRQRISIIRRMQEAGVMSFALCVLCMIFIYVGLNKTGSFIFGSSLLLLLYSLLLSVIEIRISVDALNLHLKEMDE
>NZ_CP014782.1|WP_077752767.1|2815147_2815777_+|trimeric-intracellular-cation-channel-family-protein
MIEWIYFFDLCGTAVFALSGALAAGRHRMDPFGVIVLASVTAVGGGSIRDALLGTTPVFWIRDPNYIVVILITVLITLILVRKPKKVPQHTLPIADALGLALFTVIGAEKALNLELGGMIAVVMGLITGVGGGIIRDLLCRQVPMILRTEIYATASILGGICYSMSIYLGVENMHAMLLSMMVALCIRLASIKWHLSLPAFDLKKNLKN
>NZ_CP014782.1|WP_077752768.1|2815779_2816262_+|nuclear-transport-factor-2-family-protein
MMISRYLYLILAFVGLPAVANNGEMPLEQQLAVKYIQAVTDHDYKVLSAFYDRDSIFKDRTASKSYTGRRHIISFLRRAHQGVLEYGFNIEHMFNSGSLVVMIGSYHYKGPGDQFGKPGKIIDLAIPGVTTVKLDMDNRRIEEHEDLMDYQTMADQLAVQ
>NZ_CP014782.1|WP_077752769.1|2817170_2817584_-|hypothetical-protein
MNFNIRSILNQRKDESHVTNKQINKLNKSIKSVRQVPKYMSGDQLIQTFKNFTKLQGEIKNLKNKDVNMSESKCIKLKELSEKMGEIFQEVEIRNSDKCLGKPIKQTNYLILEDKFKARYWSASHKANSTKIKTDKG
>NZ_CP014782.1|WP_077752770.1|2819330_2820833_+|hypothetical-protein
MLTIYKSGNQLDSISISQADESKTISSAKGISIDEAKQQALTSARMFEAGTSMNILNKPGSAGLVIDKYAKTLEKTIENIDKKGDQHKVVFNNKEMTIKELFHKQFGQMSSDSDQIGRQSKTSDKPLIEWLTKELKTPIGELNHSGMLTKIKSLSVFGTTVWQLMTPPEGNRPTKSSDPIENKAKNAADFSANRDKNIKALNSVLRGVCSDVAPLYKEFTQKTRTKAFDDPLTRARSERMPMVEDEKGQLKPVEGKYEDAAKYGLGFGQVVQRVHDKNSLEQKKLSAALNDNKNINGIPRENAPIQDLNRPYMMSEDEIKSIPQGYKDLGIEQGIKAHELNHGTGVNRWQPYGVYALESTQQGLPFAGAQSGGTCDILLAATVLSGNSLYSNPKEVMPLTLGAAAFMNYGGYHTFNEVLPIGEAMSSGKPFVPSNRTERNKTELYDRVQSHARKYLPPITEQNISSYKQVHTGTINELKQQHKSLSFDLSDFGNTTFYNK
>NZ_CP014782.1|WP_077755660.1|2821196_2821478_-|hypothetical-protein
MTIFEIQSKEGMSEKLVSFFKSILPGTRDFPGNKGTDFSRLSDNKFIIVTYWQHESDLGHYLNWRENTGEFSLLLSFLIQAPNIVTYEVLEDI
>NZ_CP014782.1|WP_149027232.1|2822793_2823950_-|IS3-family-transposase
MNTKRQYRTYTKEFKEEALCLITEQGYSVPQAADALGVSSNLLYTWKQKAEELESSNVTSDERAELLALRKEVKQLRVEKEIFKKGQCLLRERNEVKFRYIRDNRSQFEIKTVCKVLNVSRSAFYDWLSRPAKIISENELKLYRTAKRLFKRSRNSLGSRQLSKKLCEEGYIIGRYRTRSIMRKLGLVVTQRQAYTVTTKRKHSDSVADNVLSQNFNPAEPNQAWAGDVTYLRTNEGWMYLAIVMDLHSRRIIGWSISKRMTVSLVERALQVAITLRQPGCGVLFHSDRGSQYTSKQFQSLLTKSGMTPSMSSVGACLDNAVVERFFGSLKHEWLLNVVHLTRESMKQDVEEYIRYYNHERLHTTLGDLTPSNYEKLQSQVSSCA
>NZ_CP014782.1|WP_077752771.1|2824881_2826066_-|hypothetical-protein
MNTIQTLQRASSTMTVGATPNLNQSIDVCKVRNIHTDLEKNGHSQLRRTLDAYGIDDNRNTLSHLNQDKYNVFVKKDKSGTLELSHGAYISKVGVDEYGAFRWLNPRGLKKYQTNDLAQVTLSMENLKQLQATYKDENTTEFLVNLLRGDSAESLDNVYTSLYKKQPDVFHYSGSLNQGNGFLIYPNIPYMSETYTNGHHKDLADRREGVQLTAWAVHPALPLSLIQEITDVHPIGKPSVTQGEELNQRKAESKWTVKSLTSILDLEPKDLKMLEKLKSDIIGHLSDTYGVSAEKDNVDLFFHFPVAPSTATLHLHIWVNKGDHPLNESRAFGLNEVIEHLRNDENINSLILSRNEGLFTLPKKDALHLIKGMPGSYAPTIEVREKFSLPITGR
>NZ_CP014782.1|WP_077752772.1|2826087_2827242_-|hypothetical-protein
MNSIQTLQCSTSTMTVGAIPDLNQSINVSKVRNIHTDLEKSRHSQFRRTLDSYGIDDNRNTLSHLNREKYNVFVKKDKSGTADLSHGAYISKKGEDIYGSFKWLNPKGLTKYQTEKVAVVTFRNQAELTQLSRTYSEKPLPDFLIQILNGEECRDTVLYSKKPQLAKFIPPVNQAQHGYLIRPNSPYSSDALLETYIDSPEKLKDSKEGIILCTYAIHPGIQSDFLGGQHNQPDLERLEVNLPTPQKAIDEKTKMDSLTSILSLKLAHLPQLEKLREGTLQHLQDVYHTNENDNIRMFFHFPVAEKTATLHLHTWVNKGDHPLNEPRSFDLDTIIEHLQQGKDINELVLNRNEGSFFLPTSDSIKDIVGIPFKGVVHNSLTLPL

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Crispr_ID: NZ_CP014782_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014782_5

3526195-3526282

Orphan

Consensus_repeat	Method
AACACTTGTGTATATTTTCCATGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014782_5

>merge|NZ_CP014782|5|3526195-3526282|CRISPRCasFinder
AACACTTGTGTATATTTTCCATGGATGGATAAAAATAGACCTTGTGTCAGGACTTCTTGTAATAACACTTGTGTATATTTTCCATGGA

>NZ_CP014782|5|5|3526195-3526282|CRISPRCasFinder
AACACTTGTGTATATTTTCCATGGA	TGGATAAAAATAGACCTTGTGTCAGGACTTCTTGTAAT
AACACTTGTGTATATTTTCCATGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014782.1\|WP_077753284.1\|3512364_3513660_+\|TolC-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|273829
NZ_CP014782.1\|WP_005496187.1\|3534430_3534736_+\|DNA-binding-transcriptional-regulator-Fis	unknown	unknown	gnl\|CDD\|179020
NZ_CP014782.1\|WP_077753289.1\|3521795_3522707_-\|exopolyphosphatase	unknown	unknown	gnl\|CDD\|236826
NZ_CP014782.1\|WP_149027287.1\|3530410_3531139_-\|fumarate-reductase-cytochrome-b-subunit	unknown	unknown	gnl\|CDD\|238325
NZ_CP014782.1\|WP_077753293.1\|3526374_3527277_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NZ_CP014782.1\|WP_077753294.1\|3527392_3528136_-\|fumarate-reductase-iron-sulfur-subunit	unknown	unknown	gnl\|CDD\|184136
NZ_CP014782.1\|WP_077753283.1\|3511038_3512352_+\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NZ_CP014782.1\|WP_077753296.1\|3531274_3532006_-\|fumarate-reductase-cytochrome-b-subunit	unknown	unknown	gnl\|CDD\|237424
NZ_CP014782.1\|WP_077753285.1\|3513661_3514258_+\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|143586
NZ_CP014782.1\|WP_077753298.1\|3533443_3534412_+\|tRNA-dihydrouridine-synthase-DusB	unknown	unknown	gnl\|CDD\|182440
NZ_CP014782.1\|WP_077753286.1\|3514557_3515094_+\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|379658
NZ_CP014782.1\|WP_077753291.1\|3524205_3524532_+\|thioredoxin-TrxA	unknown	unknown	gnl\|CDD\|181812
NZ_CP014782.1\|WP_077753297.1\|3532412_3533294_+\|50S-ribosomal-protein-L11-methyltransferase	unknown	unknown	gnl\|CDD\|283886
NZ_CP014782.1\|WP_077753295.1\|3528132_3530145_-\|fumarate-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|181507
NZ_CP014782.1\|WP_077753292.1\|3524840_3526109_+\|transcription-termination-factor-Rho	unknown	unknown	gnl\|CDD\|236490
NZ_CP014782.1\|WP_077753288.1\|3518330_3521339_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|379297
NZ_CP014782.1\|WP_077753290.1\|3522713_3524030_-\|ATP-dependent-RNA-helicase-RhlB	unknown	unknown	gnl\|CDD\|235314
NZ_CP014782.1\|WP_077753287.1\|3515165_3517856_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|366183
NZ_CP014782.1\|WP_077753299.1\|3534927_3535644_+\|iron-sulfur-cluster-repair-di-iron-protein	unknown	unknown	gnl\|CDD\|274701
NZ_CP014782.1\|WP_077753300.1\|3535864_3536587_-\|HAD-IA-family-hydrolase	unknown	unknown	gnl\|CDD\|182696

Protein	Function_ID	Function_description	E-value
NZ_CP014782.1\|WP_077753284.1\|3512364_3513660_+\|TolC-family-outer-membrane-protein	gnl\|CDD\|273829	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family. Members of this model are outer membrane proteins from the TolC subfamily within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT subfamily, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (E. coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa). [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Porins].	1.24155e-79
NZ_CP014782.1\|WP_005496187.1\|3534430_3534736_+\|DNA-binding-transcriptional-regulator-Fis	gnl\|CDD\|179020	PRK00430, fis, DNA-binding transcriptional regulator Fis.	3.02152e-51
NZ_CP014782.1\|WP_077753289.1\|3521795_3522707_-\|exopolyphosphatase	gnl\|CDD\|236826	PRK11031, PRK11031, guanosine-5'-triphosphate,3'-diphosphate diphosphatase.	4.43955e-100
NZ_CP014782.1\|WP_149027287.1\|3530410_3531139_-\|fumarate-reductase-cytochrome-b-subunit	gnl\|CDD\|238325	cd00581, QFR_TypeB_TM, Quinol:fumarate reductase (QFR) Type B subfamily, transmembrane subunit; QFR couples the reduction of fumarate to succinate to the oxidation of quinol to quinone, the opposite reaction to that catalyzed by the related protein, succinate:quinone oxidoreductase (SQR). QFRs oxidize low potential quinols such as menaquinol and rhodoquinol and are involved in anaerobic respiration with fumarate as the terminal electron acceptor. SQR and QFR share a common subunit arrangement, composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. Members of this subfamily are classified as Type B as they contain one transmembrane subunit and two heme groups. The heme and quinone binding sites reside in the transmembrane subunit. The structural arrangement allows efficient electron transfer between the catalytic subunit, through iron-sulfur centers, and the transmembrane subunit containing the electron donor (quinol). The Type B enzyme from Desulfovibrio gigas is capable of fumarate reduction and succinate oxidation.	1.83559e-79
NZ_CP014782.1\|WP_077753293.1\|3526374_3527277_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.60182e-67
NZ_CP014782.1\|WP_077753294.1\|3527392_3528136_-\|fumarate-reductase-iron-sulfur-subunit	gnl\|CDD\|184136	PRK13552, frdB, fumarate reductase iron-sulfur subunit; Provisional.	4.15126e-176
NZ_CP014782.1\|WP_077753283.1\|3511038_3512352_+\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	3.93369e-88
NZ_CP014782.1\|WP_077753296.1\|3531274_3532006_-\|fumarate-reductase-cytochrome-b-subunit	gnl\|CDD\|237424	PRK13554, PRK13554, fumarate reductase cytochrome b-556 subunit; Provisional.	3.1735e-159
NZ_CP014782.1\|WP_077753285.1\|3513661_3514258_+\|OmpA-family-protein	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	2.07639e-11
NZ_CP014782.1\|WP_077753298.1\|3533443_3534412_+\|tRNA-dihydrouridine-synthase-DusB	gnl\|CDD\|182440	PRK10415, PRK10415, tRNA-dihydrouridine synthase B; Provisional.	7.82293e-169
NZ_CP014782.1\|WP_077753286.1\|3514557_3515094_+\|thioredoxin-family-protein	gnl\|CDD\|379658	pfam14595, Thioredoxin_9, Thioredoxin.	8.08325e-12
NZ_CP014782.1\|WP_077753291.1\|3524205_3524532_+\|thioredoxin-TrxA	gnl\|CDD\|181812	PRK09381, trxA, thioredoxin TrxA.	1.41861e-55
NZ_CP014782.1\|WP_077753297.1\|3532412_3533294_+\|50S-ribosomal-protein-L11-methyltransferase	gnl\|CDD\|283886	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA). This family consists of several Ribosomal protein L11 methyltransferase (EC:2.1.1.-) sequences.	6.62291e-137
NZ_CP014782.1\|WP_077753295.1\|3528132_3530145_-\|fumarate-reductase-flavoprotein-subunit	gnl\|CDD\|181507	PRK08626, PRK08626, fumarate reductase flavoprotein subunit; Provisional.	0
NZ_CP014782.1\|WP_077753292.1\|3524840_3526109_+\|transcription-termination-factor-Rho	gnl\|CDD\|236490	PRK09376, rho, transcription termination factor Rho; Provisional.	0
NZ_CP014782.1\|WP_077753288.1\|3518330_3521339_-\|TonB-dependent-receptor	gnl\|CDD\|379297	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain.	2.10484e-17
NZ_CP014782.1\|WP_077753290.1\|3522713_3524030_-\|ATP-dependent-RNA-helicase-RhlB	gnl\|CDD\|235314	PRK04837, PRK04837, ATP-dependent RNA helicase RhlB; Provisional.	0
NZ_CP014782.1\|WP_077753287.1\|3515165_3517856_-\|TonB-dependent-receptor	gnl\|CDD\|366183	pfam00593, TonB_dep_Rec, TonB dependent receptor. This model now only covers the conserved part of the barrel structure.	1.78336e-30
NZ_CP014782.1\|WP_077753299.1\|3534927_3535644_+\|iron-sulfur-cluster-repair-di-iron-protein	gnl\|CDD\|274701	TIGR03652, FeS_repair_RIC, iron-sulfur cluster repair di-iron protein. Members of this protein family, designated variously as YftE, NorA, DrnN, and NipC, are di-iron proteins involved in the repair of iron-sulfur clusters. Previously assigned names reflect pleiotropic effects of damage from NO or other oxidative stress when this protein is mutated. The suggested name now is RIC, for Repair of Iron Centers. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	2.32613e-89
NZ_CP014782.1\|WP_077753300.1\|3535864_3536587_-\|HAD-IA-family-hydrolase	gnl\|CDD\|182696	PRK10748, PRK10748, 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB.	5.94564e-59

>NZ_CP014782.1|WP_077753292.1|3524840_3526109_+|transcription-termination-factor-Rho
MNLSELKDKSISDLVKLAQEMKVENTARARKQDIIFSILKAHAKSGEDIFGGGVLEILQDGFGFLRSGDASYLAGPDDIYVSPSQIRRFSMRTGDTIFGKIRPPKEGERYFALLKVSEVNFDKPENSRTKILFENLTPLHAEERLRMERGNGSTEDITSRILDLCSPIGKGQRGLIVAPPKAGKTLLLQNMAQSITHNNPDVVLMVLLIDERPEEVTEMQRMVKGEVIASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDANALHRPKRFFGAARNIEHGGSLTIIATALVDTGSKMDEVIYEEFKGTGNQELHLSRKAAEKRVFPAIDFNRSGTRREEKLTTPEELQKMWILRKILNPMDEVTGMEFLIDKLALTKTNEEFFNAMRGGGKG
>NZ_CP014782.1|WP_077753291.1|3524205_3524532_+|thioredoxin-TrxA
MSDKIVHLSDDSFENDVIKSELPVVVDFWAEWCGPCKMIAPILDDVADDYAGKVTIAKLNVDQNSVSPAKYGVRGIPTLLIFKNGELAGTKVGALSKTQLKEFIDAQL
>NZ_CP014782.1|WP_077753290.1|3522713_3524030_-|ATP-dependent-RNA-helicase-RhlB
MSETHLSNQKFADFSLHEGIKTALNESGFEFCTPIQALSLPILLQRKDIAGQAQTGTGKTLAFLVATFEHLLSTPIPEGRQLNQPRAMIMAPTRELAIQIAKDATLLAKHTGLKVGIVYGGESYEVQRKVLDKGIDILIGTTGRIIDYVRQGIINLSAIQAVVLDEADRMFDLGFIKDIRFLFRRMPDAKSRLNMLFSATLSMKVQELAYDHMNEPEKVVIAPNEKTSKNIKEEIFYPSMDEKMKLLLSLIEEDWPEKAIVFSNTKHSCENVWSWLSGDGHRVGLLTGDVPQKKRIRILEQFTTGELDLLVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGRKGISISFACEEYALNLPAIEEYITHSIPVSNYDSTALLEDIPAPIRVHRKHNSRPQGRSGSGRPNGSRNGNRNSAPRRHDKTRRHS
>NZ_CP014782.1|WP_077753289.1|3521795_3522707_-|exopolyphosphatase
MTTSRYAAITLGSNSFNMLVAETVAGQPKIIAKYKRKVRLAEGIQNNGSLSEEVLLRGLDCLSMFAEMLEKEGVNSDNIAVIATATLRNIANSDDFCRRALPILGHPIEIITGMREAELIYQGMVATTCGEGRRLVIDIGGASTEFIIGDGDKVLLKNSLVMGCVTFNEQFFNSFPLQELDFEDAKSQVKITLGTHLTELTSLGWHCVVGASGSVQSVVELLSHRNESTCITPDVLNSLKQEVLAQSDLSMSEIAGLNHERAPTFAAGISILLALFELLNIEKLNLSGGALREGVLQSLANRL
>NZ_CP014782.1|WP_077753288.1|3518330_3521339_-|TonB-dependent-receptor
MSGSNVLKRFTPRKTLAAIAVGSVLMMSAPAVMAADTSIVKGHIVNSDGAKVSNATITLKHKTKGLVYTVETNEKGDYFLRNVPVGDYDVSITKDGFAKTQESGVRVSIGQPVILDGQITAVGLDNVERIAVTGSMIRRVDMSSSTSGVTFSQDELNTMPVDSGFENIALLAPGTSAPGGESFNGASSFGGSSSAENAYYLNGLNITNIRTGLGSLSLPWEAIAQTQVKTGAITPEFGSAIGGVVNAVSKSGDNEFHFGVEGRWDPASLRASHDSIYQADGTIDSDNNTMQDSEDFKQARIWASGAIIEDKLFYYGLYEPSQNDFEWATQTVYKEKDRESNRWFAKLDWYMTEDHSIGFMAMNNKRTWTTTTYAYDWETNKVGDQQGVAAPGEDGGKLYSLNYNGYITDDFSVSAVVGRVEENVENRVASSNPGVWDERNGSFVTLSQHTNSTVVEQHYVRDQARIDFNWDLEDHAISFGVDYSSVAVDYSEDQNGIGEAQGWWTIATAGANDISGAAEGEDYIERRRRSTFANNDSEVSSLAYYINDSWQATDNLVINAGVRVNSYENTVSDGRAYVDLDNQIAPRLQAIYDIHGDGTSKIFATYGRYFQPVSVNMNIKQGGSQREVFDYYELDQLDSDGHPIITADGSPSRGVNIRDTRVRQQGITEPGLIASSSLDSMYSDEFTVGYQQEVFETMSAGARVIWRDLGRGIEDTDVEPILSQKLAELGIDDNVGQGSYYVLHNPGEAVNLSYDFDGDGQVDNITLSPEEMALDAMERHYLALELTLDGNVTDDFRINSSYTLSHNWGNTEGLVKTDNDQADPGWTTSYDYGDLMDHGYGDLPNDHTHVFKFNGSYDITEELILGFVTSISSGRPQNEFSVHPEGVDSCAPGNPWDACISRYYGHASHYDENGDPSPRGTAGTLSWVTKLDLSLMYRTELFNGDFSIKGTVYNVLNSDTATNINEERTAYGEDGLMLNPNYGMTTERQEERYFSLVARYQF
>NZ_CP014782.1|WP_077753287.1|3515165_3517856_-|TonB-dependent-receptor
MKFNKVAKLVSLACGGVVALSAPVYAAEGDEDTVERIEVTGSRLKRVDMEGASPVTTITAEDMATAGFATVGDALRSSNLNSFGSYGGTSNNSWSSQATIRLKGADASHTLTLLDGKRMAKSPVLGGGATNINTIPTAAVERIEILSDGASAIYGTDAIAGVINIILKKDFEGVEVKVRAEQPDADGGGDNHSASFTGGLSSDKGNLMFTIEHYRKTGILQADRPYTAAHVKDGQDPSDYRSWIGLSQTGRTLDMGPNGGWEYQTPFTNAGLDCADVYGNNFTGPLGDSKYAGETSCAYDYTKAAYLDVDQERTSTLLSYSYELSEDIQLTARAYWASNKTTDISAPIPGYIEFPEAMPEYTTAEGLDLRAVPEGGAMLYRFDTAGNRVRESTDNIYDFLVGLDGTTDSFDWNASVSYNKYDVFKWGTGYQLKGATTDLVGAWNDATNTFEGWDPRNPNSEVPAGATANSDARLTSSALEMDGGLSFELFELTGGATGLYVGASYREEKLDSQVDALEEAGLIAGGSGGAGGSGERDVKAVFMEMSFPVLDNLEVNLAARYDDYSDFGGTFNPQVSVRYNVLEPLLLRASWGTGFRAPTLEDLNQSTSVGFNDVTNYLKCYEDGLGIDGCSIEDNVPVSTNRNENLGPEESESYNIGMVWDITDNINMSVDYWSLETEGLISTLVDSEITRTQAELWQAADAAGQPRPDVSAIYPGTSVSQNGAGKLTAMTNVLQNIGLSERQGVDTKFASTFETEVGDFKLGLAWSHYIKYTDSSPEGGVQTMSRNWSGTEDYPDDRVNFSANYLVGDHSLFYQADYIDHQSTTDTNDNGSSYQIDSIVYHTLSYSYTMPWNNIVSAGINNLTDEEPSFDAGGDYDSGIYDIIGRTYWVSFSQSF
>NZ_CP014782.1|WP_077753286.1|3514557_3515094_+|thioredoxin-family-protein
MNQNIKALLATTALFFSSQTLASSGCAFEDEQDGFIATCSEEKQEVILTGLVEAQTLVTELDDFAEGYKEYQVNTAAITPFKSLKEPTEIIVIIGTWCPDCHRETPRFIRIMEELNNPNIKVTYIGIDRTKTDSKGLAAQYEFSRIPTFIVMQKDEEIGRIVERPEVSLEIDLAKILN
>NZ_CP014782.1|WP_077753285.1|3513661_3514258_+|OmpA-family-protein
MKTIISGLFIALTLSLISGCAQTAEPYADQAQSRDLLDTDNDGVINARDSCSETTMGAIISNDGCPESLNQVQEKTKVIMFDFDSSQLSKNEVDKISELLHKLMDLPEAKLVLIGDTSPEGSDSYNHALAQRRVDTIHGIAKEIGFPTQSIVTQTYDQIDRTPTSIKGREHRLIAVGQWQVSGTQMMWNIFTSEQNSR
>NZ_CP014782.1|WP_077753284.1|3512364_3513660_+|TolC-family-outer-membrane-protein
MRKLILIPLLALSSQAQALTLEQSVAEAINHHPSLQQKYAAFEAAVRYRRAAVGDYLPQVRLYGGVGYEDVRYNSGQRVDSELTRTEIGVKVSQLIFDGFRTTSEIDRLDFEKEAERFGLISEAENLSLEVSRIYLKLIMANKIVGLAEQNIEEHREILKNIQSRENKGLSSESDVAQVRARLATSQSGYLAARHNQMDMQAKYYDLVGELPKDLINPMPDFEYVPTTLSYALEQAVKNHPEIDAAISDTQAASAQHEREKSDFWPKLSLELQANKNDNIGGIEGPDEDARAMLMLSYDIFNGGSTIDRTEAASWRYQQAMAVRENTQKQVVESTRLAWNSYDFVGQQRSFYRENVDQAVIAEKGYIKQFELGRRSLLDVLDAKVEVFLARKNYINAHHNYHIAAYRLINATGQLMESFRIDKPTTWSEEK
>NZ_CP014782.1|WP_077753283.1|3511038_3512352_+|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit
MGANLHIKHLEGAKRANRLILIVLALIVSTLVWAHYATLEEVVIGQGKVVPTLAVQQVESLDGGILKQVLVREGEIVTAGQALLVLDELRFASAFDEAQLSRNALRRQRARLEAELKSVNIDNLANHWLAKITVTPQAIEMIDGERSQRSQAIFHSRLSQLNSQLDQAEQAVEQKIQAQEENRITTRAQVSGLKLVRQEIAMTREAVNEGAVAELELLKLERDEIRLEGELSASKSMARQLKAVKSQAIGERLTLALDFRSRTEAERNEVINELAGLQESIKTLADRLERTKIASPIDGKVTNILVRSLGAVVEPGESIMAIVPSDGALIVETRIAPKDIAFVHTGLEATVKFTAYDFVIYGGLKGEVIYVSADAQQLEDGTTYYEAHVKTDENMLNGWPIISGMQASTDILTGNKTVLNYWLKPLLRAKANALREP
>NZ_CP014782.1|WP_077753293.1|3526374_3527277_-|LysR-family-transcriptional-regulator
MQINDLMLFVRVADCGSITAAATELELSPAAASAALKRLEKQLETSLFIRSTRSLRLTDTGERYLIHCRRALADLSLGQQAINDVREKISGVVSLAVPSDTGRTVLLPWLDDFMDEYPELKIRLHIGDTLSDFYHDKIDVALRIGTPKDSSLVAFKIAKVKRQLCASPEYIAKHGEITSIEQLSDHNCLFFMLDERTHDLWRFTKNGREFKVRVTGNRTCNDAEVARRWAVAGKGVVYKSALDLGEDILKQRLVPMMTDYEGEGADLYLVCPGREHVTPVILLLRDMLRQRCKQRLEARN
>NZ_CP014782.1|WP_077753294.1|3527392_3528136_-|fumarate-reductase-iron-sulfur-subunit
MNQFETKGRTLTFNIFRYDPQEVGDKPKIVQYQIEETPGMTVFIALNMLREHQDTSLQFDFVCRAGICGSCAMVINGLPTLACRTLTNTYPKGEITLMPLPGFELIGDLSVNTGKFMRELAERLKLWLHPMSEDANVHRLETPMSPEEAAKLYELERCVECGVCVSACATKQMRETFVGAVGMMKLARFELDSRDSRSVEDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLRRKMAMAQV
>NZ_CP014782.1|WP_077753295.1|3528132_3530145_-|fumarate-reductase-flavoprotein-subunit
MKLIYTDSLVVGAGLAGLRVAIASKERGLDTVVLSLIPAKRSHSAAAQGGMQASLGNTVKGMGDDEDVHFQDTVKGSDWGCDQDVARMFAHCAPKAVRELANWGVPWTRITEGPRQVVVNAEKVTIEEAKDAHGLINARDFGGTKKWRTCYTADGTGHSLLYAVDNKAISMDIPVHERVEALALIHDGKRCHGVVARCLVTGEIRAYIGKSTTIATGGYGRIYEVSTNAIICEGIGQALALETGVAKLGNMEAVQFHPTAIVPVGILTTEGCRGDGGLLRDKDGHRFMPDYEPEKKELASRDVVSRRMTEHMRKGKGVDSPYGPHLWLDITLLGRKHVETNLREVKEICENFLGIDPAKEWIPVRPTQHYSMGGIRTDKTGQNPQLKGLFSVGEAACWDMHGFNRLGGNSLAETVVGGMIIGKYVADFCQENTLEIDTGLAELFIDKVRSEIDDLVEGKGTESPFVIRKEMERIMMDYVGIFRNGTELDKAVSELQGLLKRSRDIGLKCNKRHANPELVEALRVKRMIKVALTVACGAAVRTESRGAHAREDFPQRNDKDWLNRTLSSWPDENALSPELSYEQLDVMKMELPPGYRGYGINNAIAHPDTEKRELEITQILSELDEEADCHQKQNAIMPFEVPEALMAKNERLSDKLNESGRVQAVRGIAK
>NZ_CP014782.1|WP_149027287.1|3530410_3531139_-|fumarate-reductase-cytochrome-b-subunit
MTINDSAIAESTTNTIMTTNTTAKVQGRRWTAWLDISQSLSGVILAIFLWMHLVLVSSILLGGEAMTWVAGLMELNFLSSDGHGYPWVVSIIAIGIGALAFIHVLVALQKLPLNLKQLVALKTQMSAIKHGDTQLWVWQAVTGVIIFVLLPVHLWLIGSAPETIGPSGSASRIWNDGVWLLYLPLLLSVELHAAIGIYRVVIKWGAAGNLNTRTRMKKIKTIISVVFVLIGLASLLAFLPYA
>NZ_CP014782.1|WP_077753296.1|3531274_3532006_-|fumarate-reductase-cytochrome-b-subunit
MTVRTLLPASSILGIAGHPWSAKADKIQSATGILLGCFLLVHLHFESSILLGKEAFYQVVQILEGGMFSETGHGFPIVTKIFSILILLVVILHAAVALRRFPAQLGQWRALRRHMNVIKHKDSHAWFWQLVTGFILFFLAPVHIFTMITNPEIGPHLSAERVYHANAWLLYALLLPAVVIHAMIGLYRVAVKWGFTANRSGLRKLAKVMIIYLITIGVFSLVSYIYLGHGLSLPIEPYVPTGH
>NZ_CP014782.1|WP_077753297.1|3532412_3533294_+|50S-ribosomal-protein-L11-methyltransferase
MPWIQLKIDTDNQHADALSDLLMEKGSLSITLEDGKDTPIYEPTLGETPLWNHTVLTALFEADRDLAVVVEQLKLVPYLGSDFSYKIEQVEDKDWEREWMDNFHPIQFGKRLWICPSWREVPVPEAVNVILDPGLAFGTGTHPTTALCLEWLDGLELTNKEVIDFGCGSGILAVAALKLGAKEVTGIDIDYQAIEASKANAERNDVLDKISLYLPEDQPKDLKADILVANILAGPLRELAPLIAEKVKSGGHLALSGLLKEQANEIAEFYTEWFDMDEPAHKEDWSRLTGIRK
>NZ_CP014782.1|WP_077753298.1|3533443_3534412_+|tRNA-dihydrouridine-synthase-DusB
MQIGPYQLKNQLIVAPMAGVTDQPFRNLCIRYGAAMAVSEMLSSNPDVWDTDKSRQRMSHAGEKGIRSVQIAGADPELMANAAVVNVQQGAQIIDINMGCPAKKVNKKLAGSALLQNPVLVKEILQAVVAAVDVPVTLKIRTGWVPEHRNGVQIAQIAEDCGIASLAVHGRTRQCMYKGNAEYDTIKAIKQNISIPVIANGDIVTPEKARYVLDHTGVDALMIGRGAQGRPWIFREIQHYLDTGNKLAPVEIDEKRLVMLEHLENLYELYGEYKGIRFARKHVGWYLDQEEQRPFRAEFNRLETVEKQCSMVERYFDEIAQN
>NZ_CP014782.1|WP_005496187.1|3534430_3534736_+|DNA-binding-transcriptional-regulator-Fis
MFDQTTNTETHQLTVGKIETANGTIKPQLLRDAVKRAVTNFFAQMDGQEAEEVYEMVLSEVEAPLLDIIMQHTRGNQTRAANMLGINRGTLRKKLKKYGMN
>NZ_CP014782.1|WP_077753299.1|3534927_3535644_+|iron-sulfur-cluster-repair-di-iron-protein
MSTTFQSDLKLSQQRVGKLVADDFRAAHIFSQFDIDFCCGGGRSLASACDRAGADLTEVEAALIAIDTSGPKEDTLNQLAIDKLIDYIEETHHTYVREKAPLLLEYSQKMVRAQGENYPEIKPFAGWVQALVEDLVPHLMKEEKILFPAIRAMADGASVNACFGHIGNPINAMEHEHNEAVQMLEKLHELTNHFQPPEYACTTWRVCYATLAEFEADLKQHIHLENNILFPKALAQSE
>NZ_CP014782.1|WP_077753300.1|3535864_3536587_-|HAD-IA-family-hydrolase
MTRIYLRPRPFQAISFDLDDTLYDNGPVIRAAEASLQQFLHQTYSETRRWQIDDWIKLKASLIQSQPELAHDTTAARLIMLEQGLLMLGYSRERAESGAMAGLNHFLQKRSDFTVPRSIINLLRELSFTYPLIGITNGNVDADKVGLGGVLEFVLHPGEGTRMKPYPDMFYIASRRLDISLHSLLHVGDSHASDVMGARMAGCQSVWLNPSFGRSKIREHRGILPHIEIDMIGSFLESLI

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Crispr_ID: NZ_CP014782_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014782_6

3602460-3602559

Orphan

Consensus_repeat	Method
GTCTGTTTGTCCATCTCTTCCATCATGTCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014782_6

>merge|NZ_CP014782|6|3602460-3602559|CRISPRCasFinder
GTCTGTTTGTCCATCTCTTCCATCATGTCGTGACTATAAACACGCTCCTAGCGGGACTAGTCTGCGTTAAGTCTGTTTGTCCATCTCTTCCATCATGTCG

>NZ_CP014782|6|6|3602460-3602559|CRISPRCasFinder
GTCTGTTTGTCCATCTCTTCCATCATGTCG	TGACTATAAACACGCTCCTAGCGGGACTAGTCTGCGTTAA
GTCTGTTTGTCCATCTCTTCCATCATGTCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014782.1\|WP_077753340.1\|3607441_3608272_+\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|366132
NZ_CP014782.1\|WP_077753330.1\|3593054_3593681_-\|DUF3365-domain-containing-protein	unknown	unknown	gnl\|CDD\|378734
NZ_CP014782.1\|WP_077753344.1\|3612410_3612968_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_077753333.1\|3595921_3597064_-\|alanine--glyoxylate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223153
NZ_CP014782.1\|WP_077753339.1\|3606478_3607351_+\|HTH-type-transcriptional-activator-IlvY	unknown	unknown	gnl\|CDD\|236961
NZ_CP014782.1\|WP_077753328.1\|3590857_3591334_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP014782.1\|WP_077753341.1\|3608404_3609208_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP014782.1\|WP_077753336.1\|3601163_3602087_-\|branched-chain-amino-acid-transaminase	unknown	unknown	gnl\|CDD\|235841
NZ_CP014782.1\|WP_077753334.1\|3597600_3599151_-\|threonine-ammonia-lyase,-biosynthetic	unknown	unknown	gnl\|CDD\|236417
NZ_CP014782.1\|WP_077753345.1\|3613284_3614151_-\|4-hydroxybenzoate-octaprenyltransferase	unknown	unknown	gnl\|CDD\|237229
NZ_CP014782.1\|WP_077753335.1\|3599152_3601003_-\|dihydroxy-acid-dehydratase	unknown	unknown	gnl\|CDD\|237104
NZ_CP014782.1\|WP_077753329.1\|3591584_3592943_+\|sodium-dependent-transporter	unknown	unknown	gnl\|CDD\|271367
NZ_CP014782.1\|WP_077753343.1\|3610324_3611029_-\|DUF4336-domain-containing-protein	unknown	unknown	gnl\|CDD\|372974
NZ_CP014782.1\|WP_077753332.1\|3594607_3595714_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293841
NZ_CP014782.1\|WP_077753331.1\|3593878_3594487_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379522
NZ_CP014782.1\|WP_077753342.1\|3609323_3610109_-\|serine-O-acetyltransferase	unknown	unknown	gnl\|CDD\|182987
NZ_CP014782.1\|WP_077753338.1\|3604809_3606291_-\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|235368
NZ_CP014782.1\|WP_077753346.1\|3614260_3616426_-\|DNA-helicase-II	unknown	unknown	gnl\|CDD\|236976
NZ_CP014782.1\|WP_169915780.1\|3617374_3618265_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270281
NZ_CP014782.1\|WP_077753337.1\|3602187_3602415_-\|acetolactate-synthase-2-small-subunit	unknown	unknown	gnl\|CDD\|236862

Protein	Function_ID	Function_description	E-value
NZ_CP014782.1\|WP_077753340.1\|3607441_3608272_+\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|366132	pfam00497, SBP_bac_3, Bacterial extracellular solute-binding proteins, family 3.	6.03065e-19
NZ_CP014782.1\|WP_077753330.1\|3593054_3593681_-\|DUF3365-domain-containing-protein	gnl\|CDD\|378734	pfam11845, DUF3365, Protein of unknown function (DUF3365). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 198 to 657 amino acids in length.	4.74139e-05
NZ_CP014782.1\|WP_077753333.1\|3595921_3597064_-\|alanine--glyoxylate-aminotransferase-family-protein	gnl\|CDD\|223153	COG0075, COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism].	1.49179e-152
NZ_CP014782.1\|WP_077753339.1\|3606478_3607351_+\|HTH-type-transcriptional-activator-IlvY	gnl\|CDD\|236961	PRK11716, PRK11716, HTH-type transcriptional activator IlvY.	0
NZ_CP014782.1\|WP_077753328.1\|3590857_3591334_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	1.47961e-44
NZ_CP014782.1\|WP_077753341.1\|3608404_3609208_+\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.32872e-56
NZ_CP014782.1\|WP_077753336.1\|3601163_3602087_-\|branched-chain-amino-acid-transaminase	gnl\|CDD\|235841	PRK06606, PRK06606, branched-chain amino acid transaminase.	0
NZ_CP014782.1\|WP_077753334.1\|3597600_3599151_-\|threonine-ammonia-lyase,-biosynthetic	gnl\|CDD\|236417	PRK09224, PRK09224, threonine ammonia-lyase IlvA.	0
NZ_CP014782.1\|WP_077753345.1\|3613284_3614151_-\|4-hydroxybenzoate-octaprenyltransferase	gnl\|CDD\|237229	PRK12848, ubiA, 4-hydroxybenzoate octaprenyltransferase.	8.02317e-175
NZ_CP014782.1\|WP_077753335.1\|3599152_3601003_-\|dihydroxy-acid-dehydratase	gnl\|CDD\|237104	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional.	0
NZ_CP014782.1\|WP_077753329.1\|3591584_3592943_+\|sodium-dependent-transporter	gnl\|CDD\|271367	cd10336, SLC6sbd_Tyt1-Like, solute carrier 6 subfamily, Fusobacterium nucleatum Tyt1-like; solute-binding domain. SLC6 proteins (also called the sodium- and chloride-dependent neurotransmitter transporter family or Na+/Cl--dependent transporter family) include neurotransmitter transporters (NTTs): these are sodium- and chloride-dependent plasma membrane transporters for the monoamine neurotransmitters serotonin (5-hydroxytryptamine), dopamine, and norepinephrine, and the amino acid neurotransmitters GABA and glycine. These NTTs are widely expressed in the mammalian brain, involved in regulating neurotransmitter signaling and homeostasis, and the target of a range of therapeutic drugs for the treatment of psychiatric diseases. Bacterial members of the SLC6 family include the LeuT amino acid transporter. An arrangement of 12 transmembrane (TM) helices appears to be as a common topological motif for eukaryotic and some prokaryotic and archaeal NTTs. However, this subfamily which contains the majority of bacterial members and some archaeal members, appears to contain only 11 TMs; for example the functional Fusobacterium nucleatum tyrosine transporter Tyt1.	4.09562e-136
NZ_CP014782.1\|WP_077753343.1\|3610324_3611029_-\|DUF4336-domain-containing-protein	gnl\|CDD\|372974	pfam14234, DUF4336, Domain of unknown function (DUF4336).	4.08246e-17
NZ_CP014782.1\|WP_077753332.1\|3594607_3595714_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293841	cd16283, RomA-like_MBL-fold, Enterobacter cloacae RomA and related proteins; MBL-fold metallo hydrolase domain. Derepression of the romA-ramA locus results in a multidrug-resistance phenotype. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	2.2728e-88
NZ_CP014782.1\|WP_077753331.1\|3593878_3594487_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379522	pfam14246, TetR_C_7, AefR-like transcriptional repressor, C-terminal region. This family comprises the C-terminal domain of transcriptional regulators of the TetR family. It includes the AefR transcriptional regulator from P. syringae. It is found in association with pfam00440.	7.35456e-20
NZ_CP014782.1\|WP_077753342.1\|3609323_3610109_-\|serine-O-acetyltransferase	gnl\|CDD\|182987	PRK11132, cysE, serine acetyltransferase; Provisional.	1.41887e-130
NZ_CP014782.1\|WP_077753338.1\|3604809_3606291_-\|ketol-acid-reductoisomerase	gnl\|CDD\|235368	PRK05225, PRK05225, ketol-acid reductoisomerase; Validated.	0
NZ_CP014782.1\|WP_077753346.1\|3614260_3616426_-\|DNA-helicase-II	gnl\|CDD\|236976	PRK11773, uvrD, DNA-dependent helicase II; Provisional.	0
NZ_CP014782.1\|WP_169915780.1\|3617374_3618265_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270281	cd13563, PBP2_SsuA_like_6, Putative substrate binding domain of sulfonate binding protein-like, a member of the type 2 periplasmic binding protein fold. This subfamily includes the periplasmic component of putative ABC-type sulfonate transport system similar to SsuA. These domains are found in eubacterial SsuA proteins that serve as initial receptors in the ABC transport of bicarbonate, nitrate, taurine, or a wide range of aliphatic sulfonates, while other closest homologs are involved in thiamine (vitamin B1) biosynthetic pathway and desulfurization (DszB). After binding the ligand, SsuA interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The SsuA proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	5.6539e-63
NZ_CP014782.1\|WP_077753337.1\|3602187_3602415_-\|acetolactate-synthase-2-small-subunit	gnl\|CDD\|236862	PRK11152, ilvM, acetolactate synthase 2 small subunit.	1.21819e-30

>NZ_CP014782.1|WP_077753337.1|3602187_3602415_-|acetolactate-synthase-2-small-subunit
MSYQLSLTLMQQPEVLERVLRVVRHRGFKVTKMNMQLEGDQSVQLAMQVESERAIELLTNQLDKLFDVIDCQVQA
>NZ_CP014782.1|WP_077753336.1|3601163_3602087_-|branched-chain-amino-acid-transaminase
MTAKKAEFIWFNGEIMPWGDAKVHVMSHGLHYGSSVFEGIRVYDTHLGPAGFRLTDHVQRLFDSAKIYRMPIPYTLDELMQACTDSVQKNDLKSAYIRPLAFYGDVGMGITPPKDAVCDVMVAAFPWGAYLGEDSMEAGVDVAVTSWNRLAPNTIPTGAKAGGNYLSSIQISTEAKRNGFDEGIALDVNGLVSEGAGANLFVVKKGKIYTPPSTSAILMGLTRDTIITLAREKGYEVVEEAMSREFLYLADEIFMTGTAAEIVPVRSVDRIDVGAGKRGPITKSIQESFFGLFTGETEDKWGWLEVL
>NZ_CP014782.1|WP_077753335.1|3599152_3601003_-|dihydroxy-acid-dehydratase
MPKLRSATSTEGRNMAGARALWRATGVKDGDFGKPIIAISNSFTQFVPGHVHLKDMGSLVAGAIEEAGGIAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADALVCISNCDKITPGMMMAALRLNIPVIFVSGGPMEAGKTKLSDKIIKLDLVDAMVAGADDRVSDADSEQIERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSMLATHADRRELFLEAGRRIMDLATRYYKHDDESALPRNIANFKAFENAMTLDIAMGGSSNTVLHLLASAHEAKVDFTMDDIDRLSRLVPHLCKVAPSTPKYHMEDVHRAGGVMGILGELDRAGLIHNDAYHVAGASLKDVLAKWDIVQTQDAAVRQFFSAGPAGIPTTKAFSQSCRWDSVDDDREDGCIRKREFAFSQEGGLAVLSGNIAIDGCIVKTAGVDEENHTFIGSARVFESQDDAVASILGGEVVAGDVVVIRYEGPKGGPGMQEMLYPTSYLKSRGLGKACALITDGRFSGGTSGLSIGHVSPEAAAGGTIGLVETGDRIEIDIPARSIKLAISDTELAARRNAMEGRGKQAWKPVDRERSVSLALKAYALLATSADKGAVRDVTMLED
>NZ_CP014782.1|WP_077753334.1|3597600_3599151_-|threonine-ammonia-lyase,-biosynthetic
MLAVAPKPNVDLAHYYLQKTLLSSVYDVAKVTPLSSLNKLSARLGCQVFLKREDMQPVHSFKLRGAYNKISELTADECQRGVVCASAGNHAQGVAMSAAARGISAIIVMPETTPEIKVDAVRRLGGEVVLHGQAFDQANGHAQKLAETEGRVYVAPFDDEAVIAGQGTVAQEMLQQQRDLEIVFVPVGGGGLIAGIAAFYKAVMPKVKIIAVEPEDSACLKAALEADERVVLPQVGLFADGVAVKQIGAAPFEVARQYVDGVITVSSDEICAAVKDIFEDTRAIAEPAGALSLAGLKKYMGDAGRGEKVAAILSGANVNFHSLRYVSERCELGEKKEAILAVKVPERPGIFLRFCELLEKRVMTEFNYRFSSRDKAVVFAGIRLTEGQSELDEIIARLENDGFEVQDLSHDETAKLHVRYMVGGHPPEELDERLFSFEFPEHPGALFKFLTTLQSKWNISLFHYRNHGAAFGRVLAGFEVPESDNQAFQQFLTELGFVYHEETQSPAYKLFLDNRD
>NZ_CP014782.1|WP_077753333.1|3595921_3597064_-|alanine--glyoxylate-aminotransferase-family-protein
MLSAPSIDAFNPPRRTLMGPGPSDVYPEVLAAQARPTIGHLDPLFVAMMDELKVLIQYAFQTKNEMTLAVSAPGSAGMETCFVNLVEAGEKVIVCRNGVFGERMRQNVERVGATAVVVDNEWGEAVSPSDVEATLKAHPDAKFVAFVHAETSTGALSDAKTLCALAKQYDCLSIVDAVTSVGGVELRVDEWGIDAIYAGSQKCLSCVPGLSPVSFSPAAVDKIKSRATPVQSWFLDQTLVMGYWSGSTDNSAKRSYHHTAPVNALYALHESLRLLANEGLEAAWQRHADMHQVLKQGLEGLGLKFVVEEACRLPQLNAVYIPEGIDDAAVRKQLLENYNLEIGAGLGALAGKAWRIGLMGFGARRENVALCLGALEEVLN
>NZ_CP014782.1|WP_077753332.1|3594607_3595714_+|MBL-fold-metallo-hydrolase
MKLTIIIICLLIGGFMLTTTQSKTAQSEAINSLASHHNLDGGYINTAKDFTENTAILPLLKRYITEDRIDAQPKNSIPLIEQTAHSLEQLPPEQDSVIRLGHSSIFIQISGQNWLIDPVFSNRASPFSFVGPKRFHQPPISLESLPHIDGVMISHDHYDHLDKQTIKYLTNKVKHFVVPLGVDKHLIKWGVPATHIQSLDWWQSARFDGVTLTATPTQHFSGRGLFDKNETLWASYVIESETHKLFFSGDSGYFDGFKQIGERFGPFDLTMVETGAYDKDWPSIHMTPEQSLQAHIDLKGHQMMPIHNGTFDLAFHSWYEPLNRITDLAKQENVDLLTPIMGQIISVGKTPETSAWWEHKPERISAAD
>NZ_CP014782.1|WP_077753331.1|3593878_3594487_-|TetR/AcrR-family-transcriptional-regulator
MQEKKISRSELKRAAIIQAAKSEFETKGFQSASMDDIAKRAEVSKRTVYNHFSNKDALFSAIMVEMMSLLCAFEHVPFSAERSLEEQLKQLVAHEVSQLRSEAFLSMAKVIIAEAIHSPELIQDAMSEFNKQESPLTSWFYSAADAGVLKTQTPEIVVTQFMAVIKAFCFWPQLIQGAEFPDEQQVELISNTAVQMILKQYT
>NZ_CP014782.1|WP_077753330.1|3593054_3593681_-|DUF3365-domain-containing-protein
MKQELILLLLVVFLSPAYSQEMDDLPEVRIADAIKDILISTRKVYTSEVSNKLFEDGTGSIKDYAHYKGFAPLPAQLIKEIGKELNRESQNEIIIHLKSKYFVNEESRLVDSQERAGWTFLMEQQNAATNVKEMRWQPYLYISDKNGVDYLTYMSADTATSEQCVSCHEVQELNASVQYARKQHGIMDKPVLKRWHMIGIYKIEIKLK
>NZ_CP014782.1|WP_077753329.1|3591584_3592943_+|sodium-dependent-transporter
MSSTDTNHFSSRLGFIMAAAGSAVGVGNIWGFPTQAATHGGGAFLLVYLVLIVILGYPMLVAELMIGRHGQTNPADAMGKIGSGPVSRNIGKLIGFTSIVTATLICTFYTILSGWFVSFSLAPIAKILGFSQASAWLMDFSLSRNLVFTTIFILMVTWVIRQGVQQGIERWSKRLMPLLLCILVLGVVYILTLPGAMTGLEVLLVPDFSQIWDADVLVGALGQTFFSLTIGTGAMMVYGAYLNQKENIGKLTAYVTLMDTSVAFLAALMIIPAMYVAQHNGVQIFAADGSLLNSDTLVFTVLPALFDTLGGNLQYLLAFVFFVLMTIAGLTSAISIVEVPTSYLMEKKEIGRNKATYLIGALIMVLSLTLVWNFEELFSFMITLTTERAQPLIALGIAIYLGWVWQRNDLLKEIQAQEGADSNSLFWRLWPIYVKFVCPLLIILIIVQLFNS
>NZ_CP014782.1|WP_077753328.1|3590857_3591334_+|Lrp/AsnC-family-transcriptional-regulator
MAELQLDKIDLDILRLLQSKGRLSNQELAEKVGLSPSPCSRRVKAMEESGFISGYATILSAEHFNLSLTAYVQVRLEKHAKAILESFEAKVSSYDEVQECCLLTGSDADYQLKVLVEDMNQFKLFLLDKLTTHPHIAGVHSSFVLKQVKSQTSIPLPN
>NZ_CP014782.1|WP_077753338.1|3604809_3606291_-|ketol-acid-reductoisomerase
MANYFNSLNLRQQLEQLAQCRFMDRNEFSEGCDFIKGWNIVILGCGAQGLNQGLNMRDSGLNIAYALRAEAIEEKRASYQKATGNGFRVGTIEELIPDADLVLNLTPDKQHTNAVNTVMPLMKQGATLSYSHGFNIVEEGMQVREDITVIMVAPKCPGTEVREEYKRGFGVPTLIAVHPENDPKGQGFDIAKAYASATGGDRAGVLHSSFIAEVKSDLMGEQTILCGMLQTGAILGYEKMVADGVEPGYAAKLIQQGWETTTEALKHGGITNMMDRLSNPAKIKAFEMADELKVILAPLFEKHMDDIIGGEFSRTMMTDWANDDANLLKWRAETGETAFENAPVSDEDIDEQTYFDKGIFLVAMIKAGVELAFDTMVSAGIIQESAYYESLHETPLIANTIARKRLYEMNVVISDTAEYGCYLFNHAAVPMLREYVQNMSPDYLGRGLSDSSNGVDNQRLIEVNAAIRGTGVEKVGAELRGHMTAMQQIVEDK
>NZ_CP014782.1|WP_077753339.1|3606478_3607351_+|HTH-type-transcriptional-activator-IlvY
MDIKTIKLYLHLSESLHFSRTAQAMHVSPSTLSRVMQRLEDEVGAKLFQRDNRSVSLTSAGVEYRHFAEQTLDHWTKLKTKIDPKQDLLRGRLNLYCSVTAAYSHLPGLLDSFRREHPLVEITLTTGDAANALSEVKNNRVDIAIAALPDPFPDNLHFAKIDDIPLVIIAPTYRCQVQELLTESYIPWDRLPFIVPEHGPGRRRTDNWFKQLGLIPNIYAQVSGQEAIASMVALGCGVSITPEIVISNSPVRDRIQIIPTPIDIPPFELGCCCRNNKLDDPIVAAFLKVI
>NZ_CP014782.1|WP_077753340.1|3607441_3608272_+|transporter-substrate-binding-domain-containing-protein
MINRFSWIFSVLLFGLLVSSPMAEQDYLQPKLRFCVESTEFPPFNYFKRVKGLKTEPSGYDVDLLRLVFEPAGIEYQVIALPWRRCLKEVYDGIVDGAMSASLNPQRKRDYLPSAPYYHLNPSYFYLKFNYPDGLKISSMSELEERGKVCGIVGFNYLNFGWSNLDKLYEINDISQLPIMLQKNRCQFFLARKETLAGTLAINKMHNLDKLLNGQVVPDSQPEPFHMLVSKKSAYGNLINPLFNKKVLELRKNGDLDRLLEYHLNELRKGAKEEND
>NZ_CP014782.1|WP_077753341.1|3608404_3609208_+|GGDEF-domain-containing-protein
MDTLAIVLVIVGLLGLIASLVPTHQVCNIPDHQHNGWLVLLSMIFMFIFGYLGFLWTLFTHKADTLDLIIAIIFCGGGGFVWLVTKMSRETIFKLKKTIKEKHYQAHHDQLTGLPNRNQFYEEIDKLIATKDQVFSCLMMDLDDFKMINDTFGHAEGDHVLQVVADRIIKVIPQDGISARLGGDELTVVLPCTLAEDAVSTARAIQNELLKEISCENHSLIIGVSIGIAQYPKDGDSRKSIMKSADTAMYHAKKNDEHYQIYQTHLV
>NZ_CP014782.1|WP_077753342.1|3609323_3610109_-|serine-O-acetyltransferase
MRYEVWEQLRVEAEALVRKEPLLASHVYSSILNHECLGSALSFIVANKLSDGVVSPFTFRELFDKAFIHCDQMLTNVATDIKAVKERDPAIVSYLTVILNLKGFQAIQVHRLANCLWNQGRTELAQFIQSRNSEVFGVDIHPACKMGTGIMFDHATGIVIGETAVIENNVSLLQGVTLGGTGNQQGDRHPKIRAGVMIGAGAKVLGNIEVGEGAKIGAGSVVLTDVASHTTVVGVPAKMVGKPESMCPAETMEQTIFESDC
>NZ_CP014782.1|WP_077753343.1|3610324_3611029_-|DUF4336-domain-containing-protein
MTLALEQLGEDIWAHEDTMPLGGTQLRLRMTVIKLACGGLWLHTPTQLSTELQAAIKQLGQVRYLVGPSNGHNIWLNDWKSAYPEAKMYVSGGIPKKISIENYHVLDEHFDNIWSDDFERLYMPGVNFFNESVFLHKKSKSLLVTDLIQNHSDACPSGFAGLMTKCVFRPLGFKDQCVAPPLKMGFTIKDKPAFSLFITNIKAWDFDKIVVTHGDVISQDAKAVFSGLVQRFID
>NZ_CP014782.1|WP_077753344.1|3612410_3612968_-|hypothetical-protein
MAYSDTAFEAGDWQFFELILAAGVAALIIFWLILTHFKRQGFMSWSLVILASAGMASLCAHSRLNAMQLDSLLSQGKAIEIIDGEFRYGEYHFPYMAKHGIDYREINLDDRTIKLYHSGYLPNSRCYRDFYSDNHFNDNVNLRLYIHWFESNYEFKQQTYKLKAPCIIKIERLKTAGNMSVASRI
>NZ_CP014782.1|WP_077753345.1|3613284_3614151_-|4-hydroxybenzoate-octaprenyltransferase
MLSILKGKLDVYMRLARMDRPIGTLLLLWPCLMALILAADGMPDLKVLVIFIIGVVVMRACGCIINDYADRELDSHVDRTKSRPLASGEISSKEALLLFAVMGLFAFALVLMLNPLVVQLSVVGIILTIIYPFTKRFTNMPQMFLGVVWSWSIPMAYAAQTGNVPAEAWWLFAANWCWTVAYDTMYAMVDRDDDLKVGIKSTAILFGKYDRQIIGLFQLAALACFITAGWAADRGLVYGLGVITFVGFSLYQQKLIYARERAPCFKAFLNNNWAGLALFVALGVDYLI
>NZ_CP014782.1|WP_077753346.1|3614260_3616426_-|DNA-helicase-II
MDVSSLLDGLNDEQRAAVGAPQSSMLVLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAVTFTNKAAAEMRERVEKVSGSNMGRMWIGTFHGLAHRLLRTHYQDANLPQTFQIIDSDDQLRLIKRILKSLNLDEKQYPPRQAQGYINGKKDQGLRPKHIDAGGFPIEQNLLQIYQVYQESCDRAGLVDFAEILLRAHELWLNKPHVLKHYQDRFKNILVDEFQDTNAIQYAWIRVLAGEGANVMIVGDDDQSIYGWRGAQVESLHKFLEDFPKASTIRLEQNYRSTGHILKASNELIANNPDRLGKKLWTEDKDGEPISIYCAFNEMDEARFIVGRISDWHDMGGNLSNCAILYRSNAQSRVLEEALLHKGLAYRIYGGLRFFERQEIKDAMSYLRLINNKDDDAAFERVVNTPARGIGGRTLDILRSTARQQQLTLWQTCLRALEEKLLSGRAANAIRGFMDLIVEMQQDTEELTLHRTTDHVIAKSGLKAMYEAEKGEKARSRVENLDELVTAARTFIMPEEIEDMGELNAFLSHAALEAGEGQADAFTDAVQLMTLHSAKGLEFPVVFMSGVEEGIFPSQMAMDEGDRLDEERRLCYVGMTRAMEKLYITYAETRRIYGRENFARPSRFIKEIPTEHVEEIRLKTQVSAPQRAKTSFTRSIVVNDSGFKVGQGVTHPKFGEGKVTNTEGSGSQARVQVNFYDVGSKWLVVAYARLETC
>NZ_CP014782.1|WP_169915780.1|3617374_3618265_+|ABC-transporter-substrate-binding-protein
MPEAPLRIASNTWPGYEPLYLARSLGYYDDSQVNLIEMTSASEVIHALRNHTIEGAALTLDEVLTVMEDGYQLKVILVMDFSNGGDVLLSKPEITSLTQLKGKNIAVEYTAVGAILLNGALNAAQLSARDVNIIACSFDEHQVCYAQADAVVTFEPNRTNILALGANQLFDSSQVPGRIIDVLAVHTDVIDSHPKALEQLIKGYFQAIDYFNQKPQTAAELMKARLQLTPREVLLSYQGLHLPSLAENLDLLRGEKSKLEEIATDLSIFMHERRLLSHKVSVEALATDRFTLEVNP

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Crispr_ID: NZ_CP014782_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014782_7

4838760-4838869

Orphan

Consensus_repeat	Method
CCACCACATCCGCATGTGACTAACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014782_7

>merge|NZ_CP014782|7|4838760-4838869|CRISPRCasFinder
CCACCACATCCGCATGTGACTAACCGTTTTACATCTAGGTTTAGATGTTCATCACAAACTGGCGTGTCTAACTATTATCAAGACACCACCACATCCGCATGTGACTAACC

>NZ_CP014782|7|7|4838760-4838869|CRISPRCasFinder
CCACCACATCCGCATGTGACTAACC	GTTTTACATCTAGGTTTAGATGTTCATCACAAACTGGCGTGTCTAACTATTATCAAGACA
CCACCACATCCGCATGTGACTAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014782.1\|WP_077754280.1\|4841760_4842603_-\|dihydropteroate-synthase	unknown	unknown	gnl\|CDD\|183230
NZ_CP014782.1\|WP_077754268.1\|4825771_4826671_-\|lipoprotein-NlpI	unknown	unknown	gnl\|CDD\|236875
NZ_CP014782.1\|WP_149027326.1\|4848778_4849282_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_077754283.1\|4845454_4845754_+\|ribosome-assembly-RNA-binding-protein-YhbY	unknown	unknown	gnl\|CDD\|182393
NZ_CP014782.1\|WP_077754284.1\|4846780_4848595_-\|protein-translocase-subunit-SecD	unknown	unknown	gnl\|CDD\|183831
NZ_CP014782.1\|WP_077754274.1\|4833658_4836337_-\|translation-initiation-factor-IF-2	unknown	unknown	gnl\|CDD\|235401
NZ_CP014782.1\|WP_149027325.1\|4842714_4844688_-\|ATP-dependent-zinc-metalloprotease-FtsH	unknown	unknown	gnl\|CDD\|182683
NZ_CP014782.1\|WP_077754279.1\|4840300_4841632_-\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|236787
NZ_CP014782.1\|WP_077754277.1\|4838973_4839318_-\|preprotein-translocase-subunit-SecG	unknown	unknown	gnl\|CDD\|235881
NZ_CP014782.1\|WP_077754275.1\|4836363_4837863_-\|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl\|CDD\|236410
NZ_CP014782.1\|WP_077754267.1\|4824001_4825582_-\|peptide-chain-release-factor-3	unknown	unknown	gnl\|CDD\|179105
NZ_CP014782.1\|WP_077754278.1\|4839319_4840102_-\|triose-phosphate-isomerase	unknown	unknown	gnl\|CDD\|184749
NZ_CP014782.1\|WP_077754270.1\|4829487_4831521_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|183329
NZ_CP014782.1\|WP_077754282.1\|4844733_4845363_-\|23S-rRNA-(uridine(2552)-2'-O)-methyltransferase-RlmE	unknown	unknown	gnl\|CDD\|183025
NZ_CP014782.1\|WP_077754276.1\|4837891_4838347_-\|ribosome-maturation-factor-RimP	unknown	unknown	gnl\|CDD\|234627
NZ_CP014782.1\|WP_077754272.1\|4832197_4833160_-\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|235333
NZ_CP014782.1\|WP_077754269.1\|4827180_4829289_-\|polyribonucleotide-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|236995
NZ_CP014782.1\|WP_077754271.1\|4831798_4832068_-\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_CP014782.1\|WP_077754273.1\|4833159_4833582_-\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|234787
NZ_CP014782.1\|WP_077755800.1\|4845833_4846733_-\|protein-translocase-subunit-SecF	unknown	unknown	gnl\|CDD\|237274

Protein	Function_ID	Function_description	E-value
NZ_CP014782.1\|WP_077754280.1\|4841760_4842603_-\|dihydropteroate-synthase	gnl\|CDD\|183230	PRK11613, folP, dihydropteroate synthase; Provisional.	1.86624e-136
NZ_CP014782.1\|WP_077754268.1\|4825771_4826671_-\|lipoprotein-NlpI	gnl\|CDD\|236875	PRK11189, PRK11189, lipoprotein NlpI; Provisional.	2.99113e-164
NZ_CP014782.1\|WP_077754283.1\|4845454_4845754_+\|ribosome-assembly-RNA-binding-protein-YhbY	gnl\|CDD\|182393	PRK10343, PRK10343, ribosome assembly RNA-binding protein YhbY.	2.89287e-39
NZ_CP014782.1\|WP_077754284.1\|4846780_4848595_-\|protein-translocase-subunit-SecD	gnl\|CDD\|183831	PRK12933, secD, protein translocase subunit SecD.	0
NZ_CP014782.1\|WP_077754274.1\|4833658_4836337_-\|translation-initiation-factor-IF-2	gnl\|CDD\|235401	PRK05306, infB, translation initiation factor IF-2; Validated.	0
NZ_CP014782.1\|WP_149027325.1\|4842714_4844688_-\|ATP-dependent-zinc-metalloprotease-FtsH	gnl\|CDD\|182683	PRK10733, hflB, ATP-dependent zinc metalloprotease FtsH.	0
NZ_CP014782.1\|WP_077754279.1\|4840300_4841632_-\|phosphoglucosamine-mutase	gnl\|CDD\|236787	PRK10887, glmM, phosphoglucosamine mutase; Provisional.	0
NZ_CP014782.1\|WP_077754277.1\|4838973_4839318_-\|preprotein-translocase-subunit-SecG	gnl\|CDD\|235881	PRK06870, secG, preprotein translocase subunit SecG; Reviewed.	9.31337e-25
NZ_CP014782.1\|WP_077754275.1\|4836363_4837863_-\|transcription-termination/antitermination-protein-NusA	gnl\|CDD\|236410	PRK09202, nusA, transcription elongation factor NusA; Validated.	0
NZ_CP014782.1\|WP_077754267.1\|4824001_4825582_-\|peptide-chain-release-factor-3	gnl\|CDD\|179105	PRK00741, prfC, peptide chain release factor 3; Provisional.	0
NZ_CP014782.1\|WP_077754278.1\|4839319_4840102_-\|triose-phosphate-isomerase	gnl\|CDD\|184749	PRK14566, PRK14566, triosephosphate isomerase; Provisional.	5.59241e-172
NZ_CP014782.1\|WP_077754270.1\|4829487_4831521_+\|EAL-domain-containing-protein	gnl\|CDD\|183329	PRK11829, PRK11829, biofilm formation regulator HmsP; Provisional.	9.8268e-115
NZ_CP014782.1\|WP_077754282.1\|4844733_4845363_-\|23S-rRNA-(uridine(2552)-2'-O)-methyltransferase-RlmE	gnl\|CDD\|183025	PRK11188, rrmJ, 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE.	1.02314e-156
NZ_CP014782.1\|WP_077754276.1\|4837891_4838347_-\|ribosome-maturation-factor-RimP	gnl\|CDD\|234627	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed.	6.85664e-70
NZ_CP014782.1\|WP_077754272.1\|4832197_4833160_-\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|235333	PRK05033, truB, tRNA pseudouridine synthase B; Provisional.	0
NZ_CP014782.1\|WP_077754269.1\|4827180_4829289_-\|polyribonucleotide-nucleotidyltransferase	gnl\|CDD\|236995	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional.	0
NZ_CP014782.1\|WP_077754271.1\|4831798_4832068_-\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	8.02549e-51
NZ_CP014782.1\|WP_077754273.1\|4833159_4833582_-\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	2.70923e-52
NZ_CP014782.1\|WP_077755800.1\|4845833_4846733_-\|protein-translocase-subunit-SecF	gnl\|CDD\|237274	PRK13021, secF, preprotein translocase subunit SecF; Reviewed.	5.14043e-158

>NZ_CP014782.1|WP_077754276.1|4837891_4838347_-|ribosome-maturation-factor-RimP
MATIEKKLEEMLKSPVEALGHRLWGLEYIQAGKHSTLRVYIDNDKGIFIEDCAETSRQISAVLDVEDPISTEYTLEVSSPGVDRPLFSAEQYASYIDETVKIQLTMPVAGSRNLKGTVIGVEGQTLTLSVDGNELIIALDNIRRGNLIAKF
>NZ_CP014782.1|WP_077754275.1|4836363_4837863_-|transcription-termination/antitermination-protein-NusA
MNKEILLVAEAVSNEKGVPREKIFEALEIALATATKKKHEGEIEVRVEIDRKTGGYETFRRWQVVEDTGEPLENPYSEITLEAAQFEDPEIQLGDFVEDDIESVTFDRITTQTAKQVIVQKVREAERAQVVEQFQDREGELITGVVKKSNRESVVVDLGGNADAVLFKEDLISRENFRPGDRIRALLFSVRPEARGAQLFLTRTKPDMLIELFRVEVPEIADEMIEIMGAARDPGSRAKIAVKSNDRRIDPIGACVGMRGARVQAVSNELNGERVDIVLWDDNPAQFVINAMAPAEVASIVVDEDSNSMDIAVEADNLAQAIGRNGQNVRLATQLSGWELNVMTVEDLQVKHQAESAKVVSLFVASLDVDEDFAQILADEGFTSLEEVAYVPAAELMEIDGFDEDTVEALRERAKAAISTRALATEEALDGAEPSEDLLALEGLEKHLAFVFASKGVITLEDLAEQGIDDLIDIEELTEEKAGELIMAARNICWFGDEE
>NZ_CP014782.1|WP_077754274.1|4833658_4836337_-|translation-initiation-factor-IF-2
MADTTVEKLAGEIGKTADRLVEQLSDAGIKKSKLDTVSESEKQQLLDFLKKQHGGDAAPTKMTLQRKSVSTLSVGSGRDTKDVKVEVRKKRTFVKRDPAAEAAANAEQEAQAAADAEAKAKADADAKSAADTLAQEKSKVAEEAKEKAKTAAAEKAKPVVETAEEKAARIEADKLQAAQEQVAKSKADEEANAAAETARKLAEENSARWAEEEKSRKEAEKTGDHHITTSTEARAAEDTADANAEKRDRRPRKAPTPVPATTGKGKRRGGRDNRNSRNARGGRNSRNARSVAPESMDHAFTKPAVVVKADVSIGETVSVSELAQKMAIKSTEIIKAMMKMGSMVTINQVLDQETAQLVAEEMGHKVILTRENELEHQVLADRDGNIEAESRAPVVTIMGHVDHGKTSLLDYIRTAKVASGEAGGITQHIGAYHVETDNGMITFLDTPGHAAFTSMRARGAKATDIVILVVAADDGVMPQTIEAIQHAKAGNVPLIVAVNKMDKPEADPERVKSELSQHGIMSEDWGGNNMFVNVSAKTGLGIDELLEGILLEAEVLELKAIKEGMAAGVVIESKLDKGRGPVATVLVQEGTLKQGDIVLCGLEYGKIRAMRDENGRTIKEAGPSFPVEILGLSGVPSAGDEATVVRDERKAREVALYRQGKFRDVKLARQQKAKLENMFANMTEGEVQELNIVLKADVQGSLEAIADSLNKLSTDEVKVNIIARGVGGLTETDATLAAASNAIMIGFNIRADAQARKVIESESVDLRYYSVIYNLIDEVRDAMSGLLAPEFKQVIIGLAEVRDVFKSPKIGAIAGCMVTEGTIKKSAPIRVLRENIVIYEGELESLRRFKDDVSDVRNGMECGIGVKNYNDVRVGDQIEVFETIEIARSLEA
>NZ_CP014782.1|WP_077754273.1|4833159_4833582_-|30S-ribosome-binding-factor-RbfA
MAKEFSRTRRIGQQLQQELAQVLQRDIKDPRVGMVTVNDVEVSRDLSYAKVFVTFFEEDEKIVEEKLEALSSAAGYIRSLVAGRMKLRVMPELRFIYDASLVEGMRMSNLVTRIIHDDEAKQKDANRSEEDENKNQQGED
>NZ_CP014782.1|WP_077754272.1|4832197_4833160_-|tRNA-pseudouridine(55)-synthase-TruB
MGRRQRGRFIDGILLLDKETGMSSNFALQRVKRLFDANKAGHTGALDPLATGMLPICLGEATKFSQHLLDADKRYLVTAKLGVRTDTSDSDGEVVQTRPLDFTQDLLMESLEYFRGDTMQVPSMYSALKHKGQPLYKYAREGIEVPREARPITVFELNFISLEGDELTLDIHCSKGTYIRTITDDLGEMLGCGAHVIMLRRTQVADYPYDRIVSLTQLNEMVEKAEAQDLDAKAILDELLLPMDTAVSKFQEINLADTVAPYLMNGNPVQNPGSCELADGELVRITIGEEHKFVGIGAINDDGLLAPKRLIVLREPLETA
>NZ_CP014782.1|WP_077754271.1|4831798_4832068_-|30S-ribosomal-protein-S15
MSLNAEQTAKILAEFGRCENDTGSSEVQVALLTAQINHLQGHFKQHIHDHHSRRGLLRMVSTRRKLLAYLKRTENVRYQELIKKLGLRR
>NZ_CP014782.1|WP_077754270.1|4829487_4831521_+|EAL-domain-containing-protein
MTASFKSLTWKQTSLVVFSALFFAIAIFIVEIALVGVTTRDELKASQKELLDSVEQPASNAVWALDDNLAKQTIEGVLKVAHVGSAVIELDDGSMFVSVASPISPPNLFDQLSKKLFGDLREISRTLYRPFDFKDSEKNQLIGTLTIFYDTQELTDSLFSQLRFSLVATLIRALLITLLLSIVFHRFLTKPIAEISEAIDKIDPESPDENLLPVSKAHMDDELGLVTSKFNQILIQFGQTQSKLRKMATRDPLTGLPNRTLLLETIAVTIQRARVHKHQFCMLFIDLDRFKNVNDSLGHAIGDQFLARIAQVLERVVADKGTVARLGGDEFVILADEIRSPDQAADFVEHLLFQLNTPMQLNEHTIHPAASVGISIYPDDGMSAEDLIRHSDIAMYSAKAAGSNQWAFFKQQMTERAAVRLRTEASLHDALKNNEFVLHFQPKLDIKSGKVVACEALIRWQKDGRLISPMSFIPVAEETGIIIPIGRWVIEQTCKTIKEWQKKYNFALPIAVNVASQQFEDPSLVPDIKQLSLRYQIRPELLEIEITETSLMNDVEKAITKLEQLKSAGFGIAVDDFGTGYSSLSYLRHLPITTMKIDRCFVTDLPQESAIASTILMLGKQLELNIVAEGIETQAQLDWLNDNDCQMGQGFFFSKPLSQHDFEEKYIKPHTATISQI
>NZ_CP014782.1|WP_077754269.1|4827180_4829289_-|polyribonucleotide-nucleotidyltransferase
MNPIVKSFEYGQHTVTLETGVIARQADAAVLASMGDTTVLVTVVGKKDEEPGRDFFPLTVNYQERTYAAGKIPGGFFKREGRPSESETLIARLIDRPIRPLFPNGFKNEVQVIITVVSVDPEINPDVISMIGTSAALAISGLPFNGPLGVARVGYINGEYILNPEVSQLAESDLDLIVAGTEGAVLMVESEAASLPEEVMLGSVAYGHEQQQVVIAAISELKAEAGKPAWDWTAPVSDADLVTSVKAIAEEKFSAAYQIADKTERRDAVTALKADAIAQLVANNADVDLREVGKILGSVEKQVVRSRIIAGNPRIDGREPDMVRGLNVMAGVLPRTHGSAIFTRGETQALVTCTLGTERDAQKVDSIMGEYTNRFMLHYNFPPYCVGETGFVGSPKRREIGHGKLAWRGINAVMPSAEEFPYSVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKTSVAGIAMGLVKEGDDFVVLSDILGDEDHLGDMDFKVAGTRDGITALQMDIKIEGITQEIMQIALQQAYGARVHILNVMDQAIGSHRDDISDHAPRITTIKINPEKIRDVIGKGGATIRALTEETGTTIELDDDGTVKIASSNGEATKEAIRRIEEITAEVEVGTIYNGKVVRIVDFGAFVTILPGKDGLVHISQIAEERVANVSDYLETGQEVKVKVMEVDRQGRVRLSMKEAQPKAESAPAAE
>NZ_CP014782.1|WP_077754268.1|4825771_4826671_-|lipoprotein-NlpI
MNQKMRTTAIAVLAGMSIFLTGCVSTQSGSSEQGKLMVEPVMPDYKLEITLAKLNEILSSADLTQEQRARFHYDRGVIYDSVGLRILSRIDFHQALKLQPNLADAYNFIGIYYTQEGEFESSYEAFDAVLELSPEYDYAYLNRGIALYYGERYELAIADMQSFYSLDPKDGYRALWLYLTESAQGTEQAKANLEINRAQLAPNAWSSVLVDYYLGKNSREAVFSAAKLGLSHPNEYAERLCEAYFYIAKIAQEQGQYSDAANYFRLALATNIYDFVEHRYARIELAKLNMLMYQEQQSQ
>NZ_CP014782.1|WP_077754267.1|4824001_4825582_-|peptide-chain-release-factor-3
MSGNKVEVDKRRTFAIISHPDAGKTTITEKVLLFGNALQKAGTVKGKKSGQHAKSDWMEMEKERGISITTSVMQFPYNDALVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDSAKGVEQRTIKLMEVTRLRDTPIVTFMNKLDRDIRDPLELMDEVENVLNIVCAPITWPISSGKEFKGVYHLLRDEVILYQSGQGHTIQNSRIIKGLDNPELDEAIGAYADDVREELELVLGASTEFDLELFLKGELTPVFFGTALGNFGVDHILDGMVEWAPTPQPRETEVRDVQPEEDKFSGFVFKIQANMDPRHRDRVAFMRICSGKYEQGMKMHHVRLGKDVNVSDALTFMAGDRNRAAVAYPGDIIGLHNHGTMRIGDTFTQGEKLRFTGIPNFAPEMFRRIRLRDPLKQKQLLKGLVQLAEEGAVQVFRPIDSNDLIVGAVGVLQFEVVVGRLKSEYKVEAIYEAINVATARWVYCDDERKLDEFRRKCSPNLALDGGNNLTYIAPTMVNLNLSMERYPDVHFAKTREN
>NZ_CP014782.1|WP_077754277.1|4838973_4839318_-|preprotein-translocase-subunit-SecG
MYEVLMVVYLLVAIGLVGLILIQQGKGADMGASFGAGASATLFGSSGAGNFLTRSTAVLAIGFFALSLIIGNLSANHTKSEDAWNDLSNGAAQVVDQVTEEVQKTEVTEDKIPD
>NZ_CP014782.1|WP_077754278.1|4839319_4840102_-|triose-phosphate-isomerase
MALRRPMVAGNWKMNGSAQLAQELFTKFATKLQDDSAEVVLCPPSIYLESVRQQLDMNKEALNGCLVRMGAQNLSQHDFGAYTGEVSGQMLKDSGCRYVIIGHSERRRMYGETSDIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDIVIEKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSEVSPFIGENIRILYGGSVTPSNAADLFAQPDVDGGLIGGVSLNSTEFLSLCSIAMSA
>NZ_CP014782.1|WP_077754279.1|4840300_4841632_-|phosphoglucosamine-mutase
MKKFFGTDGIRGKVGAGKMTPELALKLGWAAGRVLSRSGTNKVIIGKDTRISGYLFESAMEAGLSAAGLNVMLMGPMPTPAVAYLTRTFRAEAGVVISASHNPYYDNGIKFFSTDGSKLGDEIELEIERELEKPLVCVESHLLGKVSRIDDAPGRYIEYCKGNFPADQTLHGLKIVVDCANGATYHIAPNVFRELGADVIAIGDKPDGLNINHEVGATSMAKIRETVISEGADLGIALDGDGDRIMMVNSHGRVIDGDEILYILACDAKFRGVLHGGVVGTLMSNLGLELALSELDIPFLRSKVGDRYVMELLKENDWRIGGENSGHILNLDHGTTGDGIVAGILVLAAMRRRNATLEELTENIKMLPQVLVNVRFEGDHNPLESDEVLEAKLEVETKLGERGRVLLRKSGTEPLIRVMVEGDIEADVLMHANFIADKVRNLV
>NZ_CP014782.1|WP_077754280.1|4841760_4842603_-|dihydropteroate-synthase
MFQIESGEHALALDKTLVMGILNVTPDSFSDGGDFSSFELACRQADAMVSQGAKIIDIGGESTRPGAAEVGLDEELNRVLPLVEYVAKNHDVWISIDTSKPEVMEQAVKAGAHLINDVRALQAPGALEAVAELNVPVCLMHMQGQPDTMQDAPDYRDIVEDVIDFFEQRIDACIKAGIERHQILLDPGFGFGKTLSHNYELLNRLDAFKALELPLLIGLSRKSMLGNLLNREPKERLAGSLAGGLIAAQRGANILRVHDVAETLDCLQVLQATNHYQGLI
>NZ_CP014782.1|WP_149027325.1|4842714_4844688_-|ATP-dependent-zinc-metalloprotease-FtsH
MSDMAKNLILWVVIAVVLMSVFQGYSPSSTTASKMDYSAFLDDVRSGQINTVEIKSDQRTIEGTKRTGEKFTTIMPMYDQDLINDLDRKGVSMKGQEAEESGFLTQIFISWFPMLLLIGVWIFFMRQMQGGGGKGAMSFGKSKAKLMSEDQIKTTFGDVAGCDEAKEDVKELVDYLKEPTKFQKLGGRIPTGILLVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDEIDAVGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDAALLRPGRFDRQVVVGLPDVRGREQILKVHMRKVPLADDVKASVIARGTPGFSGADLANLVNEAALFAARGSRRIVGMEEFESAKDKIMMGAERRTMVMSEEDKEMTAYHEAGHAIVGCLVPEHDPVHKVTIIPRGRALGVTFFLPEADAISQSRRKLESQISVAYGGRLAEEIIYGSERVSTGASQDIKYATSIARNMVTQWGFSEKLGPVLYAEDENEVFLGRSMGKTQHMSDETASLIDAEVKTLIDNNFNRAKTYLDDNMDILHAMKDALMKYETIDANMIEDLMERREVRAPAEWNMDDNGSSNDDMGGNSEKAEEAKSSESEVKAESEATPDIKDADESTVK
>NZ_CP014782.1|WP_077754282.1|4844733_4845363_-|23S-rRNA-(uridine(2552)-2'-O)-methyltransferase-RlmE
MSGKKRTASSSRWMQEHFDDHYVKLAQKRGLRSRAAFKLEEIQEKDKLIRPGMTVVDLGAAPGGWSQVAVKLAGDSGKVIACDILSMDPIVGVDFLQGDFREEKVLDALLTRVGDGKVDVVLSDMAPNMSGSGGVDQPRAMYLVELALDMCHQVMAPNGCFAVKVFQGEGFEEYMKSVRAAFKTVKTRKPDSSRARSREVYLVATGYKL
>NZ_CP014782.1|WP_077754283.1|4845454_4845754_+|ribosome-assembly-RNA-binding-protein-YhbY
MNLTTKQKQHLKGLAHDLKPVVMLGSNGLTEGVLAEIDNALTHHELIKVKVASGDRELKNAIVDAIVRETQAVKVQLIGHVLVLFRQSEEMKIAVPKAK
>NZ_CP014782.1|WP_077755800.1|4845833_4846733_-|protein-translocase-subunit-SecF
MKTLTKLRYVSSLISLSLMVLSLSVIAVKGFNWGLDFTGGVVTEVKLDSKVTSKDISGLLSLASEQEVSVISAGEPGRWVLRYSLPSAQNDVSHQAIDIDQLLKPLNSDIEVLNSSIVGPQIGQELAEQGGLALLVAMLCIMAYLSYRFEWRLASGSLLALFHDVIFVLAFFSLTQTEFNLTVLAAVLAILGYSLNDSIIIADRIREGLRTESGLPIAEINDRAVRATFSRTMVTSGTTLLTVIALWVMGGGPLESFSIAMFIGILTGTWSSISVGTCLPELFKLNSEHYRLVPISDTP
>NZ_CP014782.1|WP_077754284.1|4846780_4848595_-|protein-translocase-subunit-SecD
MKKQTSKKILNHNSPWKYGVLIVTIIVMLLSALPSLFGEDAAIEVSDKAGLSVSLIDLHKQFEQAGIDTKRIEQAGGQTLIVLAEQAQQTQAKQLLAKLVAKPEHLTLALAPAAPSWLLSLGAEPIKLGLDLRGGVQFLLDVDMKPVYRVHGESLVDSIRLFSREHKLMGTNVRQEDDTSIILVLANSENASQYQQFIRSQHPSWQIKQKGDGVLTVSLKETEKALLRDLTVKQNLQIMRSRISQLGITEALVQRQGEHRIRIELPGVQDPAAAKNVIGATASLAFYEVKKPGSVNAKILRDDSQTPVYVSRKPVLGGEHIVDARAGIGEMGGAEVNISLDSAGGKLMSNFSRDNIGQPMATSYSEYSRNTQGEVTQQTRVISVATIQSQLGNRFSITGAGDYQEAQQLALLLRAGSMTAPVTIVEERTIGPSLGAENIVNGFAALALGMAMTLLFMGFWYRRLGWVANVALIANMVILFGLLALIPGAVLTLPGIAGLVLTVGMAVDTNVLIFERIKDNLKLGRDFAHAIDRGFDSAFGTILDANFTTMITAVVLYSIGNGPIQGFALTLGLGLLTSMFTGIFASRALINWAYGRNFNRDVRV
>NZ_CP014782.1|WP_149027326.1|4848778_4849282_-|hypothetical-protein
MSGLFRVGLMLILLGGIFLSGTNAYASEYMKKDNHIQSIQSVCLDSSAVDALKTISWVSMNPHVGHQDTPSTHTGLEHHDPSEQEFVPLISMRLLSFSQHDLHQVRPSYLLAYEFVSPPSPSFSIGYRIDFTQTLDWSLHANEKPSKLSGWKESNLLYRFSQQKSVS

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Crispr_ID: NZ_CP014782_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014782_8

4945156-4945309

Orphan

Consensus_repeat	Method
ATGCCGAGATCAAAACCCGGTGCCTTACCGCTTGGCGATACCCCAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014782_8

>merge|NZ_CP014782|8|4945156-4945309|CRISPRCasFinder
ATGCCGAGATCAAAACCCGGTGCCTTACCGCTTGGCGATACCCCAATAATCTTTTAGATTATTGAAACGAGAAAAAATGGCTGGGGTACCAGGATTCGAACCTGGGAATGCCGAGATCAAAACCCGGTGCCTTACCGCTTGGCGATACCCCAAT

>NZ_CP014782|8|8|4945156-4945309|CRISPRCasFinder
ATGCCGAGATCAAAACCCGGTGCCTTACCGCTTGGCGATACCCCAAT	AATCTTTTAGATTATTGAAACGAGAAAAAATGGCTGGGGTACCAGGATTCGAACCTGGGA
ATGCCGAGATCAAAACCCGGTGCCTTACCGCTTGGCGATACCCCAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014782.1\|WP_149027329.1\|4949362_4949713_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_077754354.1\|4937722_4938808_-\|peptide-chain-release-factor-1	unknown	unknown	gnl\|CDD\|234801
NZ_CP014782.1\|WP_077754365.1\|4952922_4953798_+\|CNNM-family-magnesium/cobalt-transport-protein-CorC	unknown	unknown	gnl\|CDD\|226910
NZ_CP014782.1\|WP_077754353.1\|4936820_4937663_-\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	unknown	unknown	gnl\|CDD\|236467
NZ_CP014782.1\|WP_077754351.1\|4933712_4934726_-\|trypsin-like-serine-protease	unknown	unknown	gnl\|CDD\|238113
NZ_CP014782.1\|WP_077754359.1\|4945939_4947031_-\|redox-regulated-ATPase-YchF	unknown	unknown	gnl\|CDD\|236583
NZ_CP014782.1\|WP_077754363.1\|4951361_4952405_+\|PhoH-family-protein	unknown	unknown	gnl\|CDD\|224616
NZ_CP014782.1\|WP_077754356.1\|4940342_4941014_+\|outer-membrane-lipoprotein-LolB	unknown	unknown	gnl\|CDD\|377063
NZ_CP014782.1\|WP_077754362.1\|4949802_4951227_+\|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	unknown	unknown	gnl\|CDD\|237673
NZ_CP014782.1\|WP_077755808.1\|4941944_4942892_+\|ribose-phosphate-pyrophosphokinase	unknown	unknown	gnl\|CDD\|234929
NZ_CP014782.1\|WP_077754367.1\|4955476_4957345_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP014782.1\|WP_077754364.1\|4952394_4952871_+\|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl\|CDD\|234575
NZ_CP014782.1\|WP_077754361.1\|4947953_4949147_-\|FAD-dependent-monooxygenase	unknown	unknown	gnl\|CDD\|181564
NZ_CP014782.1\|WP_077754355.1\|4938821_4940072_-\|glutamyl-tRNA-reductase	unknown	unknown	gnl\|CDD\|234592
NZ_CP014782.1\|WP_077754360.1\|4947164_4947749_-\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|235457
NZ_CP014782.1\|WP_077754366.1\|4953848_4955393_+\|apolipoprotein-N-acyltransferase	unknown	unknown	gnl\|CDD\|234721
NZ_CP014782.1\|WP_077754357.1\|4941014_4941872_+\|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	unknown	unknown	gnl\|CDD\|234731
NZ_CP014782.1\|WP_077755809.1\|4943369_4943789_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_077754352.1\|4934837_4935788_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_077754358.1\|4942961_4943366_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP014782.1\|WP_077754354.1\|4937722_4938808_-\|peptide-chain-release-factor-1	gnl\|CDD\|234801	PRK00591, prfA, peptide chain release factor 1; Validated.	0
NZ_CP014782.1\|WP_077754365.1\|4952922_4953798_+\|CNNM-family-magnesium/cobalt-transport-protein-CorC	gnl\|CDD\|226910	COG4535, CorC, Putative Mg2+ and Co2+ transporter CorC [Inorganic ion transport and metabolism].	9.43379e-139
NZ_CP014782.1\|WP_077754353.1\|4936820_4937663_-\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	gnl\|CDD\|236467	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional.	4.47346e-124
NZ_CP014782.1\|WP_077754367.1\|4955476_4957345_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.01765e-68
NZ_CP014782.1\|WP_077754351.1\|4933712_4934726_-\|trypsin-like-serine-protease	gnl\|CDD\|238113	cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues.	6.74801e-12
NZ_CP014782.1\|WP_077754363.1\|4951361_4952405_+\|PhoH-family-protein	gnl\|CDD\|224616	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms].	1.96507e-161
NZ_CP014782.1\|WP_077754356.1\|4940342_4941014_+\|outer-membrane-lipoprotein-LolB	gnl\|CDD\|377063	pfam03550, LolB, Outer membrane lipoprotein LolB.	7.25139e-50
NZ_CP014782.1\|WP_077754362.1\|4949802_4951227_+\|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	gnl\|CDD\|237673	PRK14325, PRK14325, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional.	0
NZ_CP014782.1\|WP_077754359.1\|4945939_4947031_-\|redox-regulated-ATPase-YchF	gnl\|CDD\|236583	PRK09601, PRK09601, redox-regulated ATPase YchF.	0
NZ_CP014782.1\|WP_077755808.1\|4941944_4942892_+\|ribose-phosphate-pyrophosphokinase	gnl\|CDD\|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	0
NZ_CP014782.1\|WP_077754364.1\|4952394_4952871_+\|rRNA-maturation-RNase-YbeY	gnl\|CDD\|234575	PRK00016, PRK00016, metal-binding heat shock protein; Provisional.	4.29598e-65
NZ_CP014782.1\|WP_077754361.1\|4947953_4949147_-\|FAD-dependent-monooxygenase	gnl\|CDD\|181564	PRK08849, PRK08849, 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional.	0
NZ_CP014782.1\|WP_077754355.1\|4938821_4940072_-\|glutamyl-tRNA-reductase	gnl\|CDD\|234592	PRK00045, hemA, glutamyl-tRNA reductase; Reviewed.	0
NZ_CP014782.1\|WP_077754360.1\|4947164_4947749_-\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|235457	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional.	1.6553e-101
NZ_CP014782.1\|WP_077754366.1\|4953848_4955393_+\|apolipoprotein-N-acyltransferase	gnl\|CDD\|234721	PRK00302, lnt, apolipoprotein N-acyltransferase; Reviewed.	0
NZ_CP014782.1\|WP_077754357.1\|4941014_4941872_+\|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	gnl\|CDD\|234731	PRK00343, ipk, 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional.	5.58189e-177

>NZ_CP014782.1|WP_077755809.1|4943369_4943789_-|hypothetical-protein
MGTSAYSYAAPSELVIDSKVKPKSYERYIRAVHKEIPASKNIKLTRFAIIEGMLNTKGIAWVFEGDGDGYILARFDYRGDTNVMRIEYDDKFVQLKYHAALGDYICENNLDDICYKNSRGYYNYIKNLRNSIKRELAKG
>NZ_CP014782.1|WP_077754358.1|4942961_4943366_-|hypothetical-protein
MKVKISIILILLFSISSQAYELKFYANPVPFSPYVEDIDGLLESAVSHNHWTYRVEEGRRYAYLDYKSYRIEVELLVEKGGVSIVPLSVVRPECKRKCSIDQDKVDGWLVGMRRHIALAVTKVLREDALKQISL
>NZ_CP014782.1|WP_077755808.1|4941944_4942892_+|ribose-phosphate-pyrophosphokinase
MPDIKLFAGNATPALAKKIADRLFCKLGDAAVGVFSDGEISVQINENVRGADVFIIQSTCAPTNDNLMELIVMVDALRRASAGRITAVIPYFGYARQDRRVRSARVPITAKVVADFLSSVGVDRVLTCDLHAEQIQGFFDVPVDNVFGSPVLLEDMLSKNLDNPVVVSPDIGGVVRARAVAKLLDDSDLAIIDKRRPQANVAQVMHIIGDVQGRDCIIVDDMIDTGGTLCKAAEALKEHGANRVFAYATHPVFSGNAAKNIAESVIDEVIVTDTIPLNKDIKALDKVTQLSMSTVMAEAIRRVSNEESISAMFKH
>NZ_CP014782.1|WP_077754357.1|4941014_4941872_+|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase
MKDTNLSLGWPAPAKLNLFLHINNQRDDGYHELQTLFQFVDYCDYLDFRVTQSSELKLHSNMNNAVADCDNLILLAAKSLQEFCNYEKGAEIWLDKRLPMGGGIGGGSSDAATTLVALNALWDTQLSKEQLMIIGLKLGADVPVFINGLSAFAEGVGEKLIPVSPKEYWYLILVPDVHVSTAVVFQDPQLTRDTPKLDIDSLMSAPWKNDCQDFVVKRYPQVANTLDWLIEYAPSRMTGTGACIFGQFELQHQALEILAKLPKDMQGFVAKGTNISPLESHLTRL
>NZ_CP014782.1|WP_077754356.1|4940342_4941014_+|outer-membrane-lipoprotein-LolB
MNNLSHITKIPLLLMLLSLSLLSACTTTPTNLVPIQVKKVSQANAWEMRGKLAVKTPEDNFSTNLYWLHTQAKNELKLTTMLGTTLLSLTTEHGMARLEVDGKTYEHHDAQQLLTNVTGWSIPVNALPLWITGQVSPDDEVSSFDEKNRPVSLFTPSETPPWQVDFLKWQHQSGAQIPRLLQLKRVDLRLKIQVNEWQALANSELSPSKNQIKNNTQMNASTR
>NZ_CP014782.1|WP_077754355.1|4938821_4940072_-|glutamyl-tRNA-reductase
MSLVAIGINHKTATVDLREKVAFSPDKIHDAMKSLASHTQTGEAVIISTCNRTELYTNTADEAEVVRWLEEYHQLSHDEVESCLYKYQGQAVVQHLMRVSSGLDSLILGEPQILGQVKQSFVKAREAGTVAITMDRMFQNTFSVAKRVRTETEIGAAAVSVAFAAVSMAKHIFSALSATKVLLIGAGETIELVARHLKDNGVDSMVVANRTLSRAEGMCEEFGATAITLEQIPDFLSQADIVISSTASPLPILGKGMVEKALKQRRHQPMLLVDIAVPRDIEAEVAELDDAFLYTVDDLQSIIEQNMASRREAAEQAEIIAEEESHLFMEWIRSLESVDSIREYRSQSMAIKDELVERAINKLAQGGDSEQLLLELANKLTNKLIHAPTQALTAASRQGDLNSIGQLRSALGLDKN
>NZ_CP014782.1|WP_077754354.1|4937722_4938808_-|peptide-chain-release-factor-1
MKDSVIRKLEGLLERNEEVLALLSDPGVISDQERFRALSKEYSQLEDVISAFKAFQQATEDLNAAKEMLNENDPEIKEMAQEEMKEAKSIIEKLEDELQILLLPKDPNDDNNAFVEIRAGAGGDEAAIFAGDLYRMYSRYFESNRWQTEIMNANEGEHGGFKEIIIKVSGEGVFGRLKFESGGHRVQRVPETESQGRVHTSACTVAVLAEVPEAEAIKINPADLKVDTFRASGAGGQHVNKTDSAIRITHIPSGIVVECQDQRSQHKNRAQAMSVLSARIQAVEDEKRRSAEETTRRNLVGSGDRSERIRTYNFPQGRVSDHRINLTLYRLNEVMEGELDALIVPLMQENQADMLAALSEG
>NZ_CP014782.1|WP_077754353.1|4936820_4937663_-|peptide-chain-release-factor-N(5)-glutamine-methyltransferase
MQQTLAGALDWASPQLVDVSDTPKLDAEVMLLHIIHKQRGYLYTWPDERLTSEQVVEYTKMVHRRVLGTPIAHIVGEREFWSLPFMVNPTTLIPRPDTEILVETALNLPLAENATVLDLGTGTGAIALSLAYEKSLWQITAVDKIIEAVALAKANREHLKLQQVEIIQSDWFDSVTCYDFNLIVSNPPYIDETDAHLDQGDVRFEPQSALTAGEAGFADLYHIASSARDYLAPGGYLLLEHGYQQAIPLRKKMIELGYENVATVRDFGSNDRCTLGRFPR
>NZ_CP014782.1|WP_077754352.1|4934837_4935788_-|hypothetical-protein
MNFKMSFTALVLLTTFNATAYEKYAVFQDNIDINTVSSNVERLTKVRKNVAGNISVAGDYRYDQNGRVILRDYADSRFDYVYNSDGLLITASALMKHGVINSYVRHTEINFISEYIYNDQGMVIRENKKVFNKFSSNLVGVPISTYRIKYIYDEHGILIKRTQILRSGEGFGNLEFHYTYHDDGKLRKIKEIKKIRPREISTLLFQYHNNGEIKKATQTIFGKGTKTIEMEYIDDGSLIYGVYYADPVKEWKVDMDFFGLSFYPIKTLTQTVEDQVTYYKYSYQNNDGDLLPDGLTLELALPTGVVYDLNYTMENE
>NZ_CP014782.1|WP_077754351.1|4933712_4934726_-|trypsin-like-serine-protease
MRKTNIGLPSLALFSALSGIYSSQSLAVEGNDVAANDAPFMVYLKDAHCSGTIIAPKTVLTASHCVSQVTVGSYVYLLHSRGVDFSHNGVRVKVVKDYTATHIYRINGEFDRSKFDDIAILELENMPEGVTWLPVAANPIPLEAEVYPIGYSTSNLKRMPIPARVAAKAHSPDYEREAFMRFCPDSIYFSREYFTQEYPFSSVSNCSWRETSHEKFVESGTYIPNQHSITIENPPLDPSDTRWSMNELGTVETKYSTFRGDSGGPLIFEGKIYGVASSGTDSYSQIHNVATYYAGFTRPGIIKWIVDTVKDIQSRSDVPAMSHSLDPEQRAIIFPDY
>NZ_CP014782.1|WP_077754359.1|4945939_4947031_-|redox-regulated-ATPase-YchF
MGFKCGIVGLPNVGKSTLFNALTKAGIEASNFPFCTIEPNTGVVPVPDARLDALAEIVNPERVIPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDENIVHVANKISPAEDIEVINTELALADLDSCERAIHRQAKRAKGGDQEAKFEVSVLEKMLAPLNEGLMLRSLDLSVEEKAAVAYLNFLTLKPTMYIANVADDGFENNPHLDTVREIASKENAVVVAVCAAIESELGEMEAEDRAEFMADLGLEEPGLDRVIRAGYDLLTLQTYFTAGVKEVRAWTVAIGATAPQAAGVIHTDFERGFIRAQVMAYDDFITYKGEAGAKEAGKLKVEGKSYIVKDGDVMHFLFNV
>NZ_CP014782.1|WP_077754360.1|4947164_4947749_-|aminoacyl-tRNA-hydrolase
MSNIKLIVGLANPGEKYAQTRHNTGAWYVQELARICGATLNADSKYYGLTARVNLHGKDVRLLIPSTFMNLSGKSVGAMANFFRIQADEILVAHDELDMQPGVAKFKLGGGHGGHNGLKDIIASLGNDKGFYRLRIGIGHPGDRNQVSNYVLGKAPAVEQTQIETVIDEAVRSTELLFTEDMAKAMNRLHTFKA
>NZ_CP014782.1|WP_077754361.1|4947953_4949147_-|FAD-dependent-monooxygenase
MSQSQTEITTMDVVILGGGMIGAATAIGLAQLGLSVTVIEAFRPETYSSEQAIDLRVSAVSVATETLLDRLGALESLAQMRRAPYLGLETWEIEGCITRFHADCVGASHLGHIVENRLIQLALWEQFESFDNLELVCPRSVDSFSRSKHGVCVTLDDGLRLETKLLVGADGANSQVRTWAGIGLTGWDYAQSAMLINIETATAQQDVTWQQFTPQGPRSLLPLPGNNASLVWYDDASRIAQLSQLSNTALAQQIKMHFPERLDRQFKVLNKGSFKLTRRHAQSYFADNLVILGDAAHTINPLAGQGVNIGFKDVDALISVISDKLSRQESWWGTTALSEYQSRRYRDNQLMMSAMDLFYAGFSNELLPLKVLRNAALKLADIDSPIKKQVLKYAMGL
>NZ_CP014782.1|WP_149027329.1|4949362_4949713_+|hypothetical-protein
MKFITAFITASIFVSTSLLPNMAIAAPSTPAINNGTIEVITVTYRAPMDYALYQYTTELLAYFRVQIQADIYTQARAGSLQMAQSIQRQMQADSSAWKATNTHNTWQDKTYSPQYF
>NZ_CP014782.1|WP_077754362.1|4949802_4951227_+|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB
MSKKLHIKTWGCQMNEYDSSKMADLMDEYKGYTLTDDAEEADVLLLNTCSIREKAQEKVFHQLGRWKKLKDKNPDLIIGVGGCVASQEGKVIKERAQCVDIIFGPQTLHRLPEMVDQVKQGGKAVIDISFPEIEKFDRLPEPRADGPTAFVSIMEGCSKYCSFCVVPYTRGEEVSRPVDDVILEVAQLAEQGVREVNLLGQNVNAFRGATHDDDICTFAELLRYIAAIDGIDRLRFTTSHPIEFSQDIIDVYEDTPELVSFLHLPVQSGSDHILTQMKRGHMAIEYKSIIRRLRKARPDIQISSDFIIGFPGESKQDFSDTMKLIEDVAFDHSFSFIYSARPGTPAADLPDDVTLAEKKERLAILQERITQQAMRYSRQMLGTVQRILVEGPSVKNPMELRGRTETSRVVNFEADPKHIGSFVDVEIVDVYTNSLRGTFIRGEDEMDLRRSLRPSDILLKHKKDDALGVTQYIP
>NZ_CP014782.1|WP_077754363.1|4951361_4952405_+|PhoH-family-protein
MSNKLTTLNLYLEPSDTRRLASLCGPFDDNIKQLERRVGVEISYRNNHFQIMGQARNCLTINNLLKTLYVETQPIRGSTPDLEPDTVHLAIQEAVALEAEAPRDDAEFYIKTKRGVVKPRNPNQSDYVANIMRHDITFGVGPAGTGKTYLAVAAAVDALERQEVRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMMGFEKVERLIEKNIIEVAPLAYMRGRTLNDAFIILDESQNTTLEQMKMFLTRIGFNSRAVITGDITQIDLPKSQKSGLRHAIEVLSKVEEVSFNFFQAKDVVRHPVVARIVEAYEDHEQQVQQAKAKHDNQYKLQETTVNES
>NZ_CP014782.1|WP_077754364.1|4952394_4952871_+|rRNA-maturation-RNase-YbeY
MSLNHKKLELDLDLQIAIDNESLPSQEDFELWVRYALREIMTQAELTIRIVDEAESQELNSTYRGKNKPTNVLSFPFEAPPEIDIPLLGDLIICAPVVELEAKQQNKSLQAHWAHMVVHGCLHLLGYDHIHDAEAEEMESLETQLVEKLGFNNPYKEQ
>NZ_CP014782.1|WP_077754365.1|4952922_4953798_+|CNNM-family-magnesium/cobalt-transport-protein-CorC
MSDDIPPSTNAQKKGWLEKVSQLFQGEPQSRDDLVDVIHDAEQREVISEDTREMIKGVLEVSDLRVRDIMMPRAQIVALQIDNTVEELLSTVISSAHSRFPVVNEDKDHIEGILLAKDLLKYGFKNNDEPFTLSQVIRPAVVVPESKRVDVLLKEFRSQRYHMAIVVDEYGGVSGLVTIEDILEEIVGEIEDEFDHDSAEDTEIRKVGKQVYMIKALTPIEDFNDEFKTQFSDEEFDTVGGLVSHAFGHLPERNEKVIIDGIEFKVISADTRRLLQLRVKLPDPNAEEQIA
>NZ_CP014782.1|WP_077754366.1|4953848_4955393_+|apolipoprotein-N-acyltransferase
MLNKLRAFAHHSKIRLVLAYLAGASTALAFAPYGLWPIYLIATVFALHQSSGLSARAGLTYWLSFGFGCFSVGISWVHVSMSTYGGIPLIASMALMAILALYLALYPALTGYLLQKLSPNTSIMRNLILFPALWTITEWLRGWVLTGFPWLWAGYSQTEGPIKALASVIGALGLSFVLALIAGVLALCLQKRWRPAAIILPLLGLTTYFSPMLSNVEPDGKTVKVALIQGNIPQSMKWEPEALWPTMSKYMDLSRPLLDADIIIWPEAAIPAPEYMVSEFLDNANKVANLNNSAIITGIISHQQDNFYNSLIVLGNHNSEHQSQADYIGDGSNEFKKHHLLPIGEFVPMESLLRPLAPLFNLPMSSFNRGAYQQPNLNALGHQIAPAICYEIAFPEQLRANVNEGTELLLTVSNDAWFGSSNGPLQHMEIAQMRSIELGRPLVRATNNGVTAVVDELGNITHQLPQFETGVLVADIPLVKGQTWFSKWGQLPIIIFSALLVGLVIIRQRWPSTN
>NZ_CP014782.1|WP_077754367.1|4955476_4957345_-|methyl-accepting-chemotaxis-protein
MKFVHKIVMAASLILMLSLACLSSYQYFQVKQQIYQQVSGSVDELASSMSNNIEAVMAEKKSITQYAASLLETDLSDEHFLEVLDQPIIKQHFPLSGMGLESGHFVGNDPTWNPGSSYDPRQRMWYQEAKKQGKFLFTAPYADAASGEILVSAAMPLSENGVFKGALFTDVSLKSLADISNRANLFGAGYAFIVGKKGEFIAYPDSSKNGRPMSQVFGSQLDTTVASSQLEIDDKMNLVIFRPLSGLDWSLGIVLDEGVIFAAADDLRRDAILYSLLALIAAILLMSGIIRQLMKPLDILNEAMRDVSTGEGDLTRRLTTDSDVEFATLAGNFNNFVIKLQDLIQQVKSIGSEVSQGTQATARGASEALEAMGQQTQEVEQLATAMHEMSVTASDVANNAQSAAYAVQQADNAVSEGVTAVVQTTESIEHLSGQIDDAANAVKELEADTVSIESILGVINAIAGQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAARTQESTSEIKEKIEKLQVGVATVVSVMEDSRETTVITVEKAQVANETLNKIRNSIEEITDMNLQIASAAEEQSQVAEEMNRNTSNIRDLSTQVANNSEQANGAMSNQLEQVKRQEQLLNQFIV

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Crispr_ID: NZ_CP014782_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014782_9

5335786-5335946

Orphan

Consensus_repeat	Method
AATAGTTACACTGTAATTATTTAT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP014782_9

>merge|NZ_CP014782|9|5335786-5335946|PILER-CR
TAGTTACACTGTAATTATTTATCTCTTGCTTGGATAACTTGGAGCCAACCTAAAATAAGAGTTACATTGTAATTATAAAAAAATCCATGATTTAGCCCAACGCAGACACGATAGACACAGCATCGAATGGATAACCAAATAGTTACACTGTAATTATTTGT

>NZ_CP014782|9|1|5335786-5335946|PILER-CR
TAGTTACACTGTAATTATTTATCT	CTTGCTTGGATAACTTGGAGCCAACCTAAAATAA
GAGTTACATTGTAATTATAAAAAA	ATCCATGATTTAGCCCAACGCAGACACGATAGACACAGCATCGAATGGATAACCAAATAGT
TACACTGTAATTATTTGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014782.1\|WP_077754664.1\|5338608_5339031_+\|transposase-family-protein	unknown	unknown	gnl\|CDD\|225995
NZ_CP014782.1\|WP_169915887.1\|5339008_5339890_+\|transposase	unknown	unknown	gnl\|CDD\|376574
NZ_CP014782.1\|WP_077754662.1\|5336606_5338283_+\|DUF3560-domain-containing-protein	unknown	unknown	gnl\|CDD\|371890
NZ_CP014782.1\|WP_077754644.1\|5322587_5323406_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_077754658.1\|5332979_5334875_+\|ParB-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|319263
NZ_CP014782.1\|WP_077754652.1\|5328679_5330938_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226875
NZ_CP014782.1\|WP_077754680.1\|5347775_5348534_+\|transposase	unknown	unknown	gnl\|CDD\|376574
NZ_CP014782.1\|WP_077754650.1\|5327843_5328233_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_077754668.1\|5340217_5341786_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372668
NZ_CP014782.1\|WP_077754647.1\|5324598_5325012_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_149027343.1\|5335329_5335731_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_077754672.1\|5342680_5343961_+\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|376574
NZ_CP014782.1\|WP_077754649.1\|5325011_5327534_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|212030
NZ_CP014782.1\|WP_077754678.1\|5347098_5347740_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_169915889.1\|5344229_5346284_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|273801
NZ_CP014782.1\|WP_077754653.1\|5331513_5331996_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014782.1\|WP_077754656.1\|5332090_5332483_-\|H-NS-histone-family-protein	unknown	unknown	gnl\|CDD\|376390
NZ_CP014782.1\|WP_077754670.1\|5341912_5342566_-\|transposase	unknown	unknown	gnl\|CDD\|376980
NZ_CP014782.1\|WP_077754676.1\|5346373_5347102_-\|UPF0236-family-protein	unknown	unknown	gnl\|CDD\|284250
NZ_CP014782.1\|WP_077754645.1\|5324212_5324554_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP014782.1\|WP_169915887.1\|5339008_5339890_+\|transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	4.07802e-54
NZ_CP014782.1\|WP_077754662.1\|5336606_5338283_+\|DUF3560-domain-containing-protein	gnl\|CDD\|371890	pfam12083, DUF3560, Domain of unknown function (DUF3560). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 120 amino acids in length. This domain has a conserved GHHSE sequence motif.	8.16103e-45
NZ_CP014782.1\|WP_169915889.1\|5344229_5346284_+\|TonB-dependent-receptor	gnl\|CDD\|273801	TIGR01778, TonB-copper, TonB-dependent copper receptor. This model represents a family of proteobacterial TonB-dependent outer membrane receptor/transporters which bind and translocate copper ions. Two characterized members of this family exist, outer membrane protein C (OprC) from Pseudomonas aeruginosa and NosA from Pseudomonas stutzeri which is responsible for providing copper for the copper-containing N2O reducatse. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	2.70601e-120
NZ_CP014782.1\|WP_077754658.1\|5332979_5334875_+\|ParB-N-terminal-domain-containing-protein	gnl\|CDD\|319263	cd16406, ParB_N_like, ParB N-terminal, parA-binding, -like domain of bacterial and plasmid parABS partitioning systems. This family represents the N-terminal domain of ParB, a DNA-binding component of the prokaryotic parABS partitioning system. parABS contributes to the efficient segregation of chromosomes and low-copy number plasmids to daughter cells during prokaryotic cell division. The process includes the parA (Walker box) ATPase, the ParB DNA-binding protein and a parS cis-acting DNA sites. Binding of ParB to centromere-like parS sites is followed by non-specific binding to DNA ("spreading", which has been implicated in gene silencing in plasmid P1) and oligomerization of additional ParB molecules near the parS sites. It has been proposed that ParB-ParB cross-linking compacts the DNA, binds to parA via the N-terminal region, and leads to parA separating the ParB-parS complexes and the recruitment of the SMC (structural maintenance of chromosomes) complexes. The ParB N-terminal domain of Bacillus subtilis and other species contains a Arginine-rich ParB Box II with residues essential for bridging of the ParB-parS complexes. The arginine-rich ParB Box II consensus (I[VIL]AGERR[FYW]RA[AS] identified in several species is partially conserved with this family and related families. Mutations within the basic columns particularly debilitate spreading from the parS sites and impair SMC recruitment. The C-terminal domain contains a HTH DNA-binding motif and is the primary homo-dimerization domain, and binds to parS DNA sites. Additional homo-dimerization contacts are found along the N-terminal domain, but dimerization of the N-terminus may only occur after concentration at ParB-parS foci.	2.15318e-27
NZ_CP014782.1\|WP_077754652.1\|5328679_5330938_-\|hypothetical-protein	gnl\|CDD\|226875	COG4469, CoiA, Competence protein CoiA-like family, contains a predicted nuclease domain [General function prediction only].	0.00324787
NZ_CP014782.1\|WP_077754668.1\|5340217_5341786_+\|hypothetical-protein	gnl\|CDD\|372668	pfam13678, Peptidase_M85, NFkB-p65-degrading zinc protease. This family of bacterial metallo-peptidases is thought to compromise the inflammatory response by degrading p65 thereby down-regulating the NF-kappaB signalling pathway. NF-kappa-B is a pleiotropic transcription factor which is present in almost all cell types and is involved in many biological processes such as inflammation, immunity, differentiation, cell growth, tumorigenesis and apoptosis. NF-kappa-B is a homo- or heterodimeric complex formed by the Rel-like domain-containing proteins RELA/p65, RELB, NFKB1/p105, NFKB1/p50, REL and NFKB2/p52; and the heterodimeric p65-p50 complex appears to be most abundant one.	1.16609e-114
NZ_CP014782.1\|WP_077754664.1\|5338608_5339031_+\|transposase-family-protein	gnl\|CDD\|225995	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.41906e-06
NZ_CP014782.1\|WP_077754672.1\|5342680_5343961_+\|ISL3-family-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	1.36732e-51
NZ_CP014782.1\|WP_077754649.1\|5325011_5327534_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|212030	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.	0.000595666
NZ_CP014782.1\|WP_077754680.1\|5347775_5348534_+\|transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	1.36278e-49
NZ_CP014782.1\|WP_077754656.1\|5332090_5332483_-\|H-NS-histone-family-protein	gnl\|CDD\|376390	pfam00816, Histone_HNS, H-NS histone family.	7.78901e-19
NZ_CP014782.1\|WP_077754670.1\|5341912_5342566_-\|transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	6.90152e-23
NZ_CP014782.1\|WP_077754676.1\|5346373_5347102_-\|UPF0236-family-protein	gnl\|CDD\|284250	pfam06782, UPF0236, Uncharacterized protein family (UPF0236).	3.40796e-07

>NZ_CP014782.1|WP_149027343.1|5335329_5335731_-|hypothetical-protein
MMKKAELLKTEHMVQQIWLKNQISKINFSTGKNFLNSEVALRAWDKLDSGLVIREADLEHYISVHLSEQGIKKLVTTLRVHKKRSGKDLLQVEITDASRRRLSQIAKISGKTKKEIIDYLILNADLSEFEPIE
>NZ_CP014782.1|WP_077754658.1|5332979_5334875_+|ParB-N-terminal-domain-containing-protein
MTNSTAAHTTSTTALTAIASHKTQAGSSKSDILNKPTATKDKAVVKLVTGESSLDAGGLQQLSITQLVDCDLNVRKGKVSKADDDALYASIKAHGLLQNLLVLPADEQGGYAVIGGGRRLKQLRRLVKDGKLTVADKVPVKVLTASEAEQFASELSLSENFVRANMHPADEFSAFAELVNQGSSFAQVAERFGVTQKFVKQRMKLSSVAPVILDAYRNGETTLDIVMCYSIADTEQQLSVWAECKDRDFYNLSALRNMLTPQALEGDNYLVEFVGKAAYKKAGGVTTTDLFEDTVYFDDSELVRTLATAKLEKQAEQLTQDGWKWTKVLLQGGYCDTEGYDKLEVVKEGDEETYNADEMALAGCVVSLRQYGGEVVIHKGLVAKEDKKAWALVQESGKPAQAESATAPEDKSGYSNALKDDLIAQRLIISKYALMNNPTVAIDALHFSMCLSAFSANHQYEFTPLYIKHSETKHIPAKGALSDNKALELIEQTKAEFDIAWFSLPTVTERFDAFCQLDTVEKHKQVAYAAALSLEPSLLGSREHVECVINKLAITPSDFWRPTKETFFKRISQGELIDIAKPVMSELWAQQATSLKKKEVVIQVDELVNGKGEQLTEKQQDYFNTWMPTGF
>NZ_CP014782.1|WP_077754656.1|5332090_5332483_-|H-NS-histone-family-protein
MSEFLATLTHGRRFKAAVTDLPVEELKLFQDKLNKLIDDREAQIAADLEINAERNAQIDAIRKQMAELGLSADDIEAVKAPKKKRDPRPAKYSIEVNGETITWTGQGRMPTVFKKELDDGFEMNDFLIKP
>NZ_CP014782.1|WP_077754653.1|5331513_5331996_+|hypothetical-protein
MKKIMLGIIMGIALSGCASADKVVNEKPHFFVKYDEPWAHGVTWAQEMRFEVTHDDSQPNDMQPYMENTVANSRVNECNEQLECKIIPLHIYLKYKIKETPEGYYINGSFITEATSKGDNKLFYPISVPFELNTTVKSSEMLNNKLGATLSMKLTSEAIQ
>NZ_CP014782.1|WP_077754652.1|5328679_5330938_-|hypothetical-protein
MDTFERHSFWEVLIKGHQRPVLATDVLKVCGDNVQAHDSPLIKAKIAQSLADTPNYPFLACAECGNPLIFRKGGINSTDHFFHSFHHVIDEEKFKLCQFYSKANSALLSNIYKGEGKWHLETKQKLALLLDNSNTVKPSSVFVEKYIFDDSHDVNVRRRPDIQFEDNVGKLWALELTRWWMNPLTIEQREAFYRKKKINLLWLFSPDCKIRNRSTWEQIMFGSNITDEQNIVDTINAPRAQCNAFTISDQAMLVSERLNQLSFEVEYPVYHFSEADNLIEANFKTDLASLNDLVTSPEHHLPYAVNTYDSLLEAKEDARRYNRSKFADLLKSLRYEYYRMRSASDLQAWSLDFSIETLRSFDALIPTGFKLSSRALSLRASLYNQYSHSKKQAVRDSMAIAIKQIRSNYYWAKSGRNCTVIESQGYLNRDLILQLPDRYRFTLKIMAMYNIVETQILKQKERKETAKQIRYLKKQYKTYRELAVPESHDLRVLAKYISGLVRDIGEQSPRLLRLARALQGEVSGLNEQYHALQASYKERGKELIYENIERVNRELYLFKTGLEQNGLTELPISNSTTGIKFKRLVNDCEKYDLPEELDVLQNMMFEYEEALYVDVMSQKYPLIQLAVTNDFDFNVDYDDEVHKLILACKAIMTGKSKGELELKYIQKGEGRLLELYVYKVACELLWVQSLQKLPSNDVLIQIRKNGGLRARRIIRALKPVIKNHSSDIQLDYANWLYSINKFSSENPKAIRY
>NZ_CP014782.1|WP_077754650.1|5327843_5328233_-|hypothetical-protein
MGEWSEYFEDFPEENPSNYIDGTFNPRLAARISAQEHKQADANKAANAELNAMITKAKSDTKARSLLVTEGCPQCGLNELNTYKISDKFYLCECQDCGIYGKGTTHQIAFKSTSDAIGEFKDWREGSEY
>NZ_CP014782.1|WP_077754649.1|5325011_5327534_-|LysM-peptidoglycan-binding-domain-containing-protein
MRSTKIVNVDTLMLADASCIESDTSWISDNDWKEMLPTGSSLNKIESQLESGESVVLSDSPRSPLFTFSQGEWIKSVSASSAFPSCAVTAITQRFSTAGSSTTFERAPYESLHPSPPLNYTPDTSKVKEQVVPISCQYNVEVACSPPCLETLNYGYFMLAKTKNESDLTLSTVKPLGKHTLLTTLGKFEEPKQLWHMLATGKSSQLSVKPVKMVPLGSQQVYESFVPVQLTVQVGERLGYPTQGVFYHFKQGQLVHEYAIVEDAKGYFNITHSTANALSDEVNIPALRGCIFLPWKINGQLAAPQHIVYSKQKLTTEEFQGIDATWLNTHAFTVDLQAILAASQDAVLERAEEQTNQQDKQPAKPQNHAVLPSHDGPGRESWPDIAKQYGLTPNELLALNPTFQQDPMKLKAGDILIIAKSEATQDKPKVDTQPPQAPQAVSRADNIYYQSSTPELAPGVIGITKQSVLKDVAVLNLGQVESGLDIDDVYLFFSDKKMDLYEFADEVYGSRDKTIIDHVMNSNPQLKKSFSQIHEGMPLVVSPWKTKHEEEDNAIAQAEALMTQYLTLSTDERQWFADNHDVVTEVLATAAEGGMDSQEVNPDTGETKNISLNTMIASMGAVIAGAGTQGGHISQKMKAFADYSNYISSKTEGLKGQALYSNSDYKAWRTRERAFRTEMKSLLGQMGKPGYIKGLQANNIGHLLNINKRQIYRSKDFAKAVGGIDMTRLYKQAMSFSKQIKAGGWIMTGLGLYGNAADIYQTCDINGLMSEACGRSTVRNISSGVFNGVIGYYLGVGLAFAPVTGGLSIILVGGGALLWGMNGGVLSNDVGSFIEEVIFD
>NZ_CP014782.1|WP_077754647.1|5324598_5325012_-|hypothetical-protein
METIIHEIMKYTAVLSVLGGIIMFIPNIYLSIKLRKKRSSITETIIDSVPDRLKDKIRFAIDANMSWVFAAYGLYLWLPYLFLRYGHHVKQAEFKVWHQATKQVFGRYFYLGLISAFGGNLAGAGAVIFIPLSIYNR
>NZ_CP014782.1|WP_077754645.1|5324212_5324554_-|hypothetical-protein
MSDESIVGYAAKIDGRVMAMRQGHLIFFSDQDKLFQFIAALSVKEHEVGLHGLGFDFIEMIFAGNEGLFLDAETYLKLSKFLRKRDVNITPTTDGVDKKKYYIVKPTVELLLH
>NZ_CP014782.1|WP_077754644.1|5322587_5323406_+|hypothetical-protein
MSMLLVKPNHKHDPLHIAISHENDIYAMPDLTDVIDYTPTHKLEINEWFKINCFLDKGFHNDFICEERINPADYLRLDANKFAKSKYICVEEKGFKFFQKLVTSNFICKKMFDFNNASFVENGNYIAINKLPDAAYDIDNDTLYFKDLSRINSLFDNIDSLYRDATTEEVDTFLNSDLICPNAAKDFNVGIPNRKKIALALEKLERFTVEDKKVINRYIKQYYPQIPHENNKFVISTDVHLKYFIYGVEERFYTTFIGQEQMVASSVISLRQ
>NZ_CP014782.1|WP_077754662.1|5336606_5338283_+|DUF3560-domain-containing-protein
MTHSTQSQPSLTNQTEATNVSPLDESGSSKKNVILSSFTSGKLRKNAKQKIASLLSVATGIKYCSQSMGMDDCYRSNAPVTVDADYFWTWYEKEYSELTIYLTVLDGVLTQAVFSDCMYHFSDDIILTFDECEAVAVESEREAAQVPEPVVLADIAEYQLTDAETVVIQSIEIDWSESNLFTDGEVLTLSQYNDKATAEALEIGRGEGYAKTKINVLFDTGEVETRRHDIDADYPTLTILFAQYGIKAVAVTAKELVTYDRVKAALVQGYLSPLNHDRKQPEPTPPSNTRKVVSLGDYQARIDAKKDRFEARASKANEQSNLFYQASRDRASHIPFGQPILVGHHSEGRARRDADRIWNDMGKSVQAQQKAEYLEGRAESVGTSGIASDDIDAIEKLNSKLEGLEQSQATMKAINKVVRSKHMSDTDKIEYMANTHKLTEVQAKEILAPDFAGRVGFAHYQLTNNGATIRATKQRIDELKRLHEQAPLSDSGSVDGQSWTLFEEEGRIKFKFDGIPSEAVRNTLKSNGFKWSRYSMAWVRKITANATAATQRLVNTWG
>NZ_CP014782.1|WP_077754664.1|5338608_5339031_+|transposase-family-protein
MFGTPSGSLNITAELLGLSDVKVLDVRTNLSAREITIAVESTRKHILCRKCGEPTKPHGLGRKLRLRHLPMFGKETIIEIIPRRGRCEHCDGGSTTTEILDWYDAKGKLTKPLEHHLLFELVNSTVADVSRKADDRLSYC
>NZ_CP014782.1|WP_169915887.1|5339008_5339890_+|transposase
MIDYHTVDALIDRYIETDIDFSTIKTLGVLGLDEISMKKGYRDFVTLITYRVDDKVNILGVVNGREMSNVILFLRTIPISLRNSIRAVCCDLYDGYMNACKAVFKKTIPIVADRFHVRKLYRNSLISLRKSELKRLRKELTAEEYAELKSAISLLRKQKDHFTDEEKIVIESLFSVSPKLKQGYQFSRQLSGIFDSHISPEVAKEKMTEWVNSVTTSELTCFNRFIQTLVNYQEQITNYFIARHSSGFVEGFNNRVKVLKRRCYGLSEPTKLFQRLLVDTTGITRFAPGVATF
>NZ_CP014782.1|WP_077754668.1|5340217_5341786_+|hypothetical-protein
MLKYLLFVAIFFQLLLNLRYAIADNGAPDNGSDEYAEFVVSKGAQHKLTHTQMVALSSAISRSVVSSYGRIIDRHTAASIEYTLIDALFLSPTFQSSVSFGIHNGQENIGQIHFSNEYEINEEQNSFSDVDEVEVCDIEDSNAVTSPVIASHEAREDDNGNPIVNIGVAPSIHSSEYPWWQEALIHEVIHHITGSSDPNSEVRHGPTEILAQRIANENNWVIPNFRGYGDTERVKGIEQRNFNSLIQATERHPFEATELMGRMSTISAGLQASTRFDLLTSFCSSNKIDWPPLPDFDDDDFSMGSAFFTGASASNLVDQCSIDVTKRVDTVSEAIEFEGGQLLIQRDFKNLNLLVAKSAFLRAKNGDGFYSKNWDSWKAWYKASSWKHLLGYGLYGYGLEQAKGNDFYNPYGLFFNDGSFSVGVIGTDVKKSTKNDNFTTLAGTNWHTIQYAGQMFFDKNGRPIALVMTDMITGAVGSGWSFIYNHGKWLYEPKDDWDERFFSNSTLSLDSNAPQFNRTNRH
>NZ_CP014782.1|WP_077754670.1|5341912_5342566_-|transposase
MSILSIRFTLRLATSNDLRKTSYIDRLLCNSHARRQFVDVITHFPDEVEHILTRYAEIWVNDAHALEQQMLPNARQAYHQQHSLPIMEEIKLWGEEHLSSGKVESNSSLGCALRYFIKHYEGLSCFCTVDGVKLDNNLIEAMLKIIVWDRKNAMFHKTLHGATIGDIITSMIASASEAGINVFEYFTTLQREKVQVRANPEHYLPWNYLDQPGSLVN
>NZ_CP014782.1|WP_077754672.1|5342680_5343961_+|ISL3-family-transposase
MFGSRSDSLNITAELLGLSDVKVNDVRTNLSAREITISVERTRKNIPCRQCGEPTKPHDMGRKLRLRHLPMFGKETIIEIIPRRGRCEHCDGGSTTTETLNWYDANRKLTKPLEHHLLFELVNSTVADVSRKADVDYHTVDALINRYIETEIDFSTIKALGVLGLDEISMKKGYRDFVTLITYRIDDKVSILGVVEGREKSNVIQFLRRIPHHLQKTISAVCCDLYDGYMNACKEVFDKTIPIIADRFHVRRLYRKSLVNLRKSELKKLKAALTAQEYSDLKPAIALLRKQKDHFTDEEKSVVEPLFSLSPKLKQGYQFSRELSGIFDSHITPEVAKEKMTKWINNVSAPELNCFNQFIKTLVSYQEQITNYFIARNTSGFVEGFNNRVKVLKRRCYGLSNTTKLFQRLLVDTMGMVRFAPGVTAF
>NZ_CP014782.1|WP_169915889.1|5344229_5346284_+|TonB-dependent-receptor
MKHSLLVLIPLVFASNALATNYTEEIERITVLGVKEPMLDSIQLDDVTNKAAGDLGEQLREFNGVSSGRQGGRGFSPVIRGQQNSQLNVLLDGGIISGACPSGMDHSTSYATVGYDKITVIKGNQSVLYGAGGSGGSIFIERERPELMESGLTGKIDMTATSNSGRRKLSADVATGNDSGYIRIFGSTEQQNDYYQDGDGNDFSSGYNGKNGGIVMGFDLTPDTNVELSYEGVRDRDIFYTIKHAMDTPRADSDSWRFKLTQSINSGPFHTLELNAYSSDVEHLMDDYSVRDRWKYMRMKGLSMSNTSGGKIQGIATLGNAEVTLGMEYLNNYSDGTHLMDNGSEELDESNFRLYALEWPGVRQEEYGTFGEADITLDNKNSMRLGLRIDRNFVEATKADGEIIAYKKPIYLYNKYYNSDTTKVDETNIGAVLGFNHQLDADQALNMYITRSVVSADAGQRFRAISMHGSNWIGNPDLKAETHNQLELGWQQGNAEQNMAVSVFYDKVADYILQYRLESSQPHSIRHAVLQKNVDATLYGMEAELTQPLFENWRFRSSLSLTIGRYNSKGDDYLPQIAPISSVNTLDWHTDNWSAGMSWELAAKQSRANTDSGLDAGKTAGYGLINLFGSYNASKALAFGGGINNLLDKTYALHLNKASDSYLTEAEQVNEPGREFWVNANWKF
>NZ_CP014782.1|WP_077754676.1|5346373_5347102_-|UPF0236-family-protein
MTAVIFDPEQIDYHGGQLKQDGAVSTLRGKLTSKHCAASALVDEQSYLKQAALESAIKQDMTKDTSMTAICDGADNCWNVINAIAPHCHDITRILDWFHIAMKFENLSLKNQTLREKAKRAKWHLWRGYPDRAIIRLEEIKNNLQEKKEQRKLTKLMNYIANNIECIIDYRQRQKNGLIFTSQLAESTVESLINQRCKRQQHMRWSRKGLHSLLQVRASISSNSWQEHWERYVGEAMLKTAA
>NZ_CP014782.1|WP_077754678.1|5347098_5347740_-|hypothetical-protein
MNLSVRVIVETVNEAGEVKSHSVISIKSVTSPCSLADLGYRQTEQVEMLQHIQQALLDEQSCFLQEDTPRCPRCNNKITRNGYVKSNFHGVYTDHKVSTRKQICLKCKWKSIPSINSLFGSAIHPDLARIQTEMGAKHSYRDAENILTLLSSKKRSINNHERVKKTTECVGEYLSLSPGNDSSIETQAADRLCIQVDGGYVNTVEADKSALKS
>NZ_CP014782.1|WP_077754680.1|5347775_5348534_+|transposase
MAYLAYKSITLPDKVNILGVVNGREMSNVILFLRTIPISLRNSIRAVCCDLYDGYMNACKAVFKKTIPIVADRFHVRKLYRNSLISLRKSELKRLRKELTAEEYAELKSAISLLRKQKDHFTDEEKIVIESLFSVSPKLKQGYQFSRQLSGIFDSHISPEVAKEKMTEWVNSVTTSELTCFNRFIQTLVNYQEQITNYFIARHSSGFVEGFNNRVKVLKRRCYGLSEPTKLFQRLLVDTTGITRFAPGVATF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1122439 : 1170183

Stx2-converting_phage(16.67%)

transposase,plate

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077751526.1\|1122439_1124002_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.2e-45	28.8
WP_077751064.1\|1124029_1124374_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_077751527.1\|1124373_1124664_-	hypothetical protein	NA	NA	NA	NA
WP_077751528.1\|1124662_1125532_+	S8 family serine peptidase	NA	NA	NA	NA
WP_077751529.1\|1125745_1128535_+	two component system sensor kinase	A0A1V0SGX0	Hokovirus	1.7e-31	35.9
WP_077751530.1\|1128588_1129233_-	two component system response regulator	NA	NA	NA	NA
WP_179948407.1\|1129815_1130247_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1B1ITQ0	uncultured_Mediterranean_phage	3.7e-26	49.2
WP_077751532.1\|1130356_1131610_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	3.9e-84	40.5
WP_077751533.1\|1131820_1132120_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_077751534.1\|1132391_1133372_-\|transposase	transposase	NA	NA	NA	NA
WP_077751535.1\|1133375_1135388_-	RHS repeat protein	NA	NA	NA	NA
WP_149027216.1\|1135443_1135935_-	hypothetical protein	NA	NA	NA	NA
WP_149027217.1\|1135931_1137056_-	sterol desaturase family protein	NA	NA	NA	NA
WP_077751538.1\|1137335_1137620_-	type VI secretion system PAAR protein	NA	NA	NA	NA
WP_077755558.1\|1137924_1138917_-	hypothetical protein	NA	NA	NA	NA
WP_077751539.1\|1139024_1140206_-	hypothetical protein	NA	NA	NA	NA
WP_169915684.1\|1140339_1140489_-	hypothetical protein	NA	NA	NA	NA
WP_077751540.1\|1140488_1141205_-	hypothetical protein	NA	NA	NA	NA
WP_077755559.1\|1141454_1142447_-	hypothetical protein	NA	NA	NA	NA
WP_077751541.1\|1142561_1143662_-	hypothetical protein	NA	NA	NA	NA
WP_077751542.1\|1143661_1144378_-	hypothetical protein	NA	NA	NA	NA
WP_077751543.1\|1144377_1147710_-	hypothetical protein	NA	NA	NA	NA
WP_077751544.1\|1147706_1148696_-	DUF4123 domain-containing protein	NA	NA	NA	NA
WP_077751545.1\|1148692_1150804_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.5e-32	27.2
WP_077751546.1\|1151144_1151663_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_077751547.1\|1151909_1153175_-	type VI secretion system ImpA family N-terminal domain-containing protein	NA	NA	NA	NA
WP_077751548.1\|1153271_1156835_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_077751549.1\|1156853_1158257_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_169915686.1\|1158262_1158901_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_077751551.1\|1158900_1160460_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_077751552.1\|1160459_1163045_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.8e-88	33.7
WP_077751553.1\|1163054_1163840_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_077751554.1\|1163844_1165179_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_077751555.1\|1165181_1165655_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_077751556.1\|1165654_1167007_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_077751557.1\|1167018_1168026_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_077751558.1\|1167989_1169756_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_077751559.1\|1169757_1170183_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_2

1179871 : 1191116

uncultured_Caudovirales_phage(28.57%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077751566.1\|1179871_1181131_-	Bcr/CflA family multidrug efflux MFS transporter	S4TR35	Salmonella_phage	5.6e-14	23.2
WP_077751567.1\|1181262_1182165_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_077751568.1\|1182369_1183032_+	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	2.1e-33	41.8
WP_077751569.1\|1183173_1183563_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	8.5e-22	44.1
WP_077751570.1\|1183562_1183919_+	sulfurtransferase complex subunit TusC	NA	NA	NA	NA
WP_077751571.1\|1183918_1184200_+	sulfurtransferase complex subunit TusB	NA	NA	NA	NA
WP_179948408.1\|1184193_1184532_+	TusE/DsrC/DsvC family sulfur relay protein	NA	NA	NA	NA
WP_077751573.1\|1184879_1186166_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.2e-96	44.8
WP_077751574.1\|1186184_1186559_-	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	6.7e-08	33.6
WP_077751575.1\|1186551_1187883_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	8.9e-79	39.5
WP_077751576.1\|1187899_1188526_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_149027218.1\|1188596_1191116_-	DNA translocase FtsK 4TM domain-containing protein	S5VNE3	Mycobacterium_phage	8.3e-86	49.3

DBSCAN-SWA_3

1583752 : 1673443

Vibrio_phage(30.77%)

transposase,tail,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077751464.1\|1583752_1584961_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	2.4e-51	48.1
WP_077751896.1\|1585168_1585603_-	hypothetical protein	NA	NA	NA	NA
WP_077751897.1\|1586226_1586427_-\|transposase	transposase	NA	NA	NA	NA
WP_077755580.1\|1586588_1587290_-	hydrophilic protein virA protein	NA	NA	NA	NA
WP_077751898.1\|1587460_1587898_+	hypothetical protein	H9C152	Pectobacterium_phage	4.3e-30	47.7
WP_169915696.1\|1588510_1588657_-	hypothetical protein	NA	NA	NA	NA
WP_077751899.1\|1588681_1588981_-	DUF2913 family protein	NA	NA	NA	NA
WP_077751901.1\|1589892_1590210_-	hypothetical protein	NA	NA	NA	NA
WP_149027235.1\|1590273_1590756_-	hypothetical protein	G3FFM1	Vibrio_phage	2.5e-23	40.5
WP_077751903.1\|1590715_1590940_-	hypothetical protein	NA	NA	NA	NA
WP_077751904.1\|1590943_1591129_-	hypothetical protein	NA	NA	NA	NA
WP_077751905.1\|1591658_1592060_-\|transposase	transposase	NA	NA	NA	NA
WP_077755581.1\|1592783_1593401_-	hypothetical protein	NA	NA	NA	NA
WP_077751384.1\|1593500_1594643_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_169915697.1\|1595675_1598300_-	hypothetical protein	NA	NA	NA	NA
WP_169915699.1\|1598185_1598590_-	hypothetical protein	NA	NA	NA	NA
WP_077751907.1\|1599569_1600340_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_149027236.1\|1600598_1604954_-	hypothetical protein	NA	NA	NA	NA
WP_077751909.1\|1605221_1605581_+	hypothetical protein	NA	NA	NA	NA
WP_077751910.1\|1605577_1605907_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_077751911.1\|1605990_1607595_+\|transposase	transposase	NA	NA	NA	NA
WP_077751912.1\|1607809_1609111_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_077751914.1\|1609542_1611900_-	hypothetical protein	A0A0H4BEQ6	Agrotis_segetum_granulosis_virus	1.1e-36	29.8
WP_077751916.1\|1613146_1613716_-	hypothetical protein	A0A2I7QJM3	Vibrio_phage	5.9e-24	38.2
WP_077751917.1\|1613712_1614267_-	hypothetical protein	A0A1L5C2A4	Pseudoalteromonas_phage	3.5e-45	51.1
WP_077751918.1\|1614263_1614461_-	hypothetical protein	NA	NA	NA	NA
WP_077751919.1\|1614954_1615503_+	hypothetical protein	NA	NA	NA	NA
WP_077751921.1\|1616916_1617195_-	hypothetical protein	NA	NA	NA	NA
WP_077751922.1\|1617353_1618418_-	DUF4255 domain-containing protein	NA	NA	NA	NA
WP_077751923.1\|1618441_1620529_-	ATP-binding protein	A0A2D2W2C3	Stenotrophomonas_phage	1.4e-06	29.9
WP_077751924.1\|1620628_1622413_-	hypothetical protein	NA	NA	NA	NA
WP_077751926.1\|1622747_1625510_-	hypothetical protein	NA	NA	NA	NA
WP_077751927.1\|1625528_1628027_-	hypothetical protein	NA	NA	NA	NA
WP_077751928.1\|1628125_1628572_-	hypothetical protein	NA	NA	NA	NA
WP_077751929.1\|1628568_1628976_-	GPW/gp25 family protein	NA	NA	NA	NA
WP_077751930.1\|1628988_1631139_-	hypothetical protein	NA	NA	NA	NA
WP_077751931.1\|1631268_1631772_-	hypothetical protein	NA	NA	NA	NA
WP_169915701.1\|1631759_1631921_-	hypothetical protein	NA	NA	NA	NA
WP_077755582.1\|1631917_1632406_-\|tail	phage tail protein	NA	NA	NA	NA
WP_169915703.1\|1632618_1633782_-\|tail	phage tail sheath family protein	NA	NA	NA	NA
WP_077755583.1\|1633858_1634911_-\|tail	phage tail sheath family protein	NA	NA	NA	NA
WP_077751933.1\|1635248_1635701_-\|tail	phage tail protein	NA	NA	NA	NA
WP_077751935.1\|1636192_1637329_-	hypothetical protein	NA	NA	NA	NA
WP_149027237.1\|1637889_1638108_-	hypothetical protein	NA	NA	NA	NA
WP_169915705.1\|1641795_1642002_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_077751937.1\|1642358_1643267_+\|protease	trypsin-like serine protease	G4Y9Z9	Emiliania_huxleyi_virus	2.8e-07	26.7
WP_077755584.1\|1644106_1644937_-	2',3'-cyclic-nucleotide 2'-phosphodiesterase	NA	NA	NA	NA
WP_077751939.1\|1645142_1645460_-	hypothetical protein	NA	NA	NA	NA
WP_077751940.1\|1645482_1645890_-	GFA family protein	NA	NA	NA	NA
WP_077751941.1\|1645950_1646880_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
WP_077751942.1\|1647052_1647550_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_077751943.1\|1647745_1648381_+	DUF938 domain-containing protein	NA	NA	NA	NA
WP_077751944.1\|1648834_1650232_+	tryptophanase	NA	NA	NA	NA
WP_077751945.1\|1650366_1651623_+	hypothetical protein	NA	NA	NA	NA
WP_077751946.1\|1651650_1652838_+	carbohydrate porin	NA	NA	NA	NA
WP_077751947.1\|1652964_1654236_-	GHKL domain-containing protein	NA	NA	NA	NA
WP_077751948.1\|1654238_1654937_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.2e-26	32.6
WP_077751949.1\|1655026_1655398_-	hypothetical protein	NA	NA	NA	NA
WP_077751950.1\|1655394_1658049_-	cadherin-like domain-containing protein	NA	NA	NA	NA
WP_077751952.1\|1658546_1660145_-\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_077751953.1\|1660186_1661104_-\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	7.2e-96	58.8
WP_077751954.1\|1661168_1661918_-	DUF4158 domain-containing protein	NA	NA	NA	NA
WP_077751955.1\|1662956_1663382_+	hypothetical protein	NA	NA	NA	NA
WP_077751956.1\|1663789_1664800_-	hypothetical protein	NA	NA	NA	NA
WP_077751957.1\|1665899_1666514_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	3.6e-35	47.7
WP_169915707.1\|1666877_1667033_+	hypothetical protein	NA	NA	NA	NA
WP_077751958.1\|1667043_1667592_+	disulfide bond formation protein B	NA	NA	NA	NA
WP_077751959.1\|1667726_1668668_-	bile acid:sodium symporter family protein	NA	NA	NA	NA
WP_077751960.1\|1668847_1670032_-\|transposase	transposase	NA	NA	NA	NA
WP_077751961.1\|1670167_1670395_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_077751962.1\|1670394_1670613_+	DUF2798 domain-containing protein	NA	NA	NA	NA
WP_077751963.1\|1670658_1671033_+	RidA family protein	NA	NA	NA	NA
WP_077751964.1\|1671078_1672467_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	2.0e-20	28.7
WP_077751965.1\|1672525_1673443_-\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	1.9e-96	59.1

DBSCAN-SWA_4

3896698 : 3977500

Pseudomonas_phage(25.0%)

transposase,head,protease,integrase

attL 3867467:3867485|attR 3923102:3923120

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3867467:3867485	attL	NA	NA	NA	NA
WP_077751231.1\|3896698_3897826_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_077753548.1\|3898568_3898997_+	CesT family type III secretion system chaperone	NA	NA	NA	NA
WP_077753549.1\|3898993_3901564_+	hypothetical protein	NA	NA	NA	NA
WP_077751384.1\|3901771_3902914_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_077753550.1\|3903022_3903388_-	VOC family protein	NA	NA	NA	NA
WP_077755733.1\|3903500_3903851_-	phosphotyrosine protein phosphatase	NA	NA	NA	NA
WP_077753552.1\|3905044_3905410_-	hypothetical protein	NA	NA	NA	NA
WP_077753553.1\|3905796_3906069_+	hypothetical protein	NA	NA	NA	NA
WP_077753554.1\|3906281_3906869_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_077753555.1\|3908849_3909962_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_077753556.1\|3910231_3910627_-	hypothetical protein	NA	NA	NA	NA
WP_077753557.1\|3911245_3912586_+	group II intron reverse transcriptase/maturase	A0A0N7AE80	Bacillus_phage	7.5e-17	26.0
WP_077755734.1\|3912715_3913039_-	barstar family protein	NA	NA	NA	NA
WP_077753558.1\|3913369_3914326_+\|integrase	integron integrase	A0A0F6SJK8	Mycobacterium_phage	1.6e-08	43.8
WP_077753559.1\|3914668_3915934_-	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_077753560.1\|3915967_3917008_-	proline racemase family protein	NA	NA	NA	NA
WP_077753561.1\|3917210_3918125_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA
WP_077753562.1\|3918262_3919264_+	4-hydroxyproline epimerase	NA	NA	NA	NA
WP_077753563.1\|3919330_3920896_+	aldehyde dehydrogenase (NADP(+))	NA	NA	NA	NA
WP_077753564.1\|3921013_3921685_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_077755735.1\|3921778_3922843_+	ketoacyl-ACP synthase III	NA	NA	NA	NA
WP_149027421.1\|3924698_3926006_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
3923102:3923120	attR	NA	NA	NA	NA
WP_149027295.1\|3926504_3928367_+	M4 family metallopeptidase	NA	NA	NA	NA
WP_077753568.1\|3929669_3930638_-	hypothetical protein	NA	NA	NA	NA
WP_169915796.1\|3931001_3931436_-	META domain-containing protein	NA	NA	NA	NA
WP_179948381.1\|3931471_3932224_-	hypothetical protein	NA	NA	NA	NA
WP_077753570.1\|3934752_3934932_-	hypothetical protein	NA	NA	NA	NA
WP_077755737.1\|3935412_3937443_-	PhoX family phosphatase	NA	NA	NA	NA
WP_077753571.1\|3937725_3938715_-	XdhC family protein	NA	NA	NA	NA
WP_077753572.1\|3938701_3939934_-	cytochrome c	NA	NA	NA	NA
WP_077753573.1\|3939930_3940464_-	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_077753574.1\|3940460_3943301_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA
WP_077753575.1\|3943740_3945141_-	Re/Si-specific NAD(P)(+) transhydrogenase subunit beta	NA	NA	NA	NA
WP_077753576.1\|3945155_3946703_-	Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha	NA	NA	NA	NA
WP_077753577.1\|3947129_3947711_-	hypothetical protein	NA	NA	NA	NA
WP_077753578.1\|3947815_3948499_-	DNA polymerase III subunit epsilon	NA	NA	NA	NA
WP_077753579.1\|3948636_3950484_-	cyclic nucleotide-binding/CBS domain-containing protein	NA	NA	NA	NA
WP_077755738.1\|3950579_3951434_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_169915798.1\|3951480_3954903_-	DNRLRE domain-containing protein	NA	NA	NA	NA
WP_077755739.1\|3955197_3956958_-	amidohydrolase	NA	NA	NA	NA
WP_077753581.1\|3957400_3959119_-	cation acetate symporter	NA	NA	NA	NA
WP_005502042.1\|3959146_3959413_-	DUF4212 domain-containing protein	NA	NA	NA	NA
WP_077753582.1\|3960064_3961096_+	hypothetical protein	NA	NA	NA	NA
WP_077753583.1\|3961467_3962334_+	hypothetical protein	NA	NA	NA	NA
WP_077753584.1\|3962597_3965099_-	hypothetical protein	A0A0H5ART3	Pseudomonas_phage	3.0e-80	26.7
WP_077753585.1\|3965095_3965503_-	hypothetical protein	NA	NA	NA	NA
WP_077753586.1\|3965502_3968514_-	DUF1833 family protein	C3VVS6	Vibrio_phage	3.6e-59	35.8
WP_077753587.1\|3968513_3968885_-	hypothetical protein	NA	NA	NA	NA
WP_077753588.1\|3968877_3971790_-	tape measure protein	NA	NA	NA	NA
WP_077753589.1\|3971792_3972128_-	hypothetical protein	NA	NA	NA	NA
WP_077753590.1\|3972133_3972466_-	hypothetical protein	NA	NA	NA	NA
WP_077753591.1\|3972529_3973435_-	hypothetical protein	NA	NA	NA	NA
WP_077753592.1\|3973449_3973866_-	hypothetical protein	NA	NA	NA	NA
WP_077753593.1\|3973865_3974303_-	DUF1320 family protein	B7SDP4	Haemophilus_phage	1.9e-17	39.8
WP_077753594.1\|3974302_3974824_-	hypothetical protein	NA	NA	NA	NA
WP_077753595.1\|3974901_3975795_-\|head	Mu-like prophage major head subunit gpT family protein	J9SVY7	Pseudomonas_phage	7.0e-80	48.8
WP_077753596.1\|3975848_3976244_-	hypothetical protein	A0A0U5KRP3	unidentified_phage	6.8e-19	47.3
WP_077753597.1\|3976237_3977500_-\|protease	phage protease	A0A0M5N0Q6	Ralstonia_phage	4.7e-45	37.8

DBSCAN-SWA_5

3980922 : 3989202

Vibrio_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077753603.1\|3980922_3981387_-	phage virion morphogenesis protein	A0A1B0T6E8	Thiobacimonas_phage	1.8e-15	34.2
WP_077753604.1\|3981386_3981659_-	hypothetical protein	NA	NA	NA	NA
WP_077753605.1\|3981651_3983094_-	hypothetical protein	A0A2H4IYU7	uncultured_Caudovirales_phage	1.3e-54	47.3
WP_077753606.1\|3983096_3984752_-	DUF935 domain-containing protein	J9SVY0	Pseudomonas_phage	1.6e-125	48.7
WP_149027422.1\|3984754_3986278_-	hypothetical protein	J9RWF2	Pseudomonas_phage	4.8e-161	59.7
WP_077753608.1\|3986331_3986898_-	DUF3486 family protein	A0A0C4UQU5	Shigella_phage	1.2e-48	59.0
WP_077753609.1\|3986900_3987197_-	hypothetical protein	A0A2I7S9D8	Vibrio_phage	1.1e-21	55.2
WP_077753610.1\|3987197_3987527_-	DUF2730 family protein	NA	NA	NA	NA
WP_077753611.1\|3987519_3987750_-	TraR/DksA C4-type zinc finger protein	M4MHG5	Vibrio_phage	8.3e-09	46.5
WP_077753612.1\|3987746_3988346_-	hypothetical protein	A0A0K0MDC7	Pseudoalteromonas_phage	1.1e-07	29.8
WP_077753613.1\|3988342_3988621_-	hypothetical protein	NA	NA	NA	NA
WP_077753614.1\|3988617_3989202_-	N-acetylmuramidase	A0A2I7S9B9	Vibrio_phage	8.5e-34	48.3

DBSCAN-SWA_6

3993736 : 4001012

Vibrio_phage(33.33%)

transposase,integrase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077753620.1\|3993736_3994165_-	transcriptional regulator	A0A0C4UQZ9	Shigella_phage	2.7e-13	38.1
WP_077753621.1\|3994154_3994787_-	regulatory protein GemA	R9U1B6	Rhizobium_phage	9.6e-07	30.7
WP_077753622.1\|3994843_3995467_-	DUF3164 family protein	A0A2I7S9B0	Vibrio_phage	9.6e-60	55.4
WP_149027297.1\|3995660_3996218_-	helix-turn-helix transcriptional regulator	A0A1B1P6Z5	Rhodovulum_phage	7.9e-13	36.5
WP_149027298.1\|3996207_3996507_-	hypothetical protein	NA	NA	NA	NA
WP_077753626.1\|3996838_3997567_-	ATP-binding protein	M4SPU5	Rhodobacter_phage	9.9e-24	27.9
WP_077753627.1\|3997643_3999866_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_077753628.1\|3999858_4000086_-	hypothetical protein	NA	NA	NA	NA
WP_149027299.1\|4000277_4001012_+	helix-turn-helix domain-containing protein	A0A2I7S9A5	Vibrio_phage	7.6e-48	44.0

DBSCAN-SWA_7

5060199 : 5142357

Vibrio_phage(16.67%)

transposase,plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077751229.1\|5060199_5061117_-\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	6.5e-97	59.5
WP_077754432.1\|5061331_5062114_-	3-hydroxybutyrate dehydrogenase	A0A0M4JSW6	Mollivirus	7.4e-09	26.9
WP_077754433.1\|5063044_5063707_+	CoA transferase subunit B	NA	NA	NA	NA
WP_077754434.1\|5064181_5064934_-	autoinducer binding domain-containing protein	A0A1I9KF49	Aeromonas_phage	3.8e-10	31.5
WP_077754435.1\|5065192_5066596_-	cytochrome P450	A0A0B5IYC9	Pandoravirus	1.3e-19	31.2
WP_077754436.1\|5067036_5067711_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_077754437.1\|5067927_5069610_-	GMC family oxidoreductase	NA	NA	NA	NA
WP_077754438.1\|5070295_5070856_-	redoxin domain-containing protein	NA	NA	NA	NA
WP_077754439.1\|5071174_5071546_+	hypothetical protein	NA	NA	NA	NA
WP_077754440.1\|5071625_5072168_-	protein disulfide oxidoreductase	NA	NA	NA	NA
WP_077754441.1\|5072167_5073016_-	thioredoxin domain-containing protein	NA	NA	NA	NA
WP_077754442.1\|5073127_5075227_-	thioredoxin family protein	NA	NA	NA	NA
WP_077754443.1\|5075345_5078474_-	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_169915871.1\|5078470_5079634_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_077754445.1\|5079947_5080334_-	hypothetical protein	NA	NA	NA	NA
WP_077754446.1\|5080757_5082329_+	CDGSH iron-sulfur domain-containing protein	NA	NA	NA	NA
WP_179948430.1\|5082462_5084763_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA
WP_077754448.1\|5084996_5085902_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_077754449.1\|5086067_5086796_-	HDOD domain-containing protein	NA	NA	NA	NA
WP_077754450.1\|5087096_5087708_-	arylesterase	NA	NA	NA	NA
WP_077754451.1\|5087985_5090022_-	TonB-dependent receptor	NA	NA	NA	NA
WP_077754452.1\|5090869_5091325_+	BlaI/MecI/CopY family transcriptional regulator	NA	NA	NA	NA
WP_077754453.1\|5091317_5092610_+	M56 family metallopeptidase	NA	NA	NA	NA
WP_077754454.1\|5092854_5093202_-	DUF805 domain-containing protein	NA	NA	NA	NA
WP_077754455.1\|5093536_5094022_+	azurin	NA	NA	NA	NA
WP_077754456.1\|5095045_5096155_-	FAD-dependent monooxygenase	NA	NA	NA	NA
WP_077754457.1\|5096822_5098721_+	hypothetical protein	NA	NA	NA	NA
WP_077754458.1\|5098789_5099326_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_077754459.1\|5099485_5100280_+	hypothetical protein	NA	NA	NA	NA
WP_077754460.1\|5100426_5100696_+	hypothetical protein	NA	NA	NA	NA
WP_077754461.1\|5100836_5101109_+	hypothetical protein	NA	NA	NA	NA
WP_149027334.1\|5101115_5102948_+	GGDEF domain-containing protein	NA	NA	NA	NA
WP_077754462.1\|5103058_5104825_+	bifunctional aldolase/short-chain dehydrogenase	NA	NA	NA	NA
WP_077754463.1\|5104952_5106563_+	autoinducer-2 kinase	NA	NA	NA	NA
WP_077754464.1\|5106669_5107044_+	cupin domain-containing protein	NA	NA	NA	NA
WP_077754465.1\|5107120_5108062_-	hypothetical protein	NA	NA	NA	NA
WP_077754466.1\|5108197_5108725_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_077754467.1\|5108836_5110117_-	MFS transporter	NA	NA	NA	NA
WP_077754468.1\|5110296_5111199_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_077755819.1\|5111424_5113593_+	cation:dicarboxylase symporter family transporter	NA	NA	NA	NA
WP_077754469.1\|5113970_5115005_-	hypothetical protein	NA	NA	NA	NA
WP_077754470.1\|5115253_5116513_-	hypothetical protein	NA	NA	NA	NA
WP_077755820.1\|5116563_5117055_-	DUF4157 domain-containing protein	NA	NA	NA	NA
WP_077754471.1\|5117256_5120076_-	hypothetical protein	NA	NA	NA	NA
WP_077754472.1\|5120075_5121479_-	ATP-binding protein	A0A1C9EGA6	Acidianus_two-tailed_virus	6.8e-13	37.5
WP_077754473.1\|5121520_5126416_-	hypothetical protein	NA	NA	NA	NA
WP_077754474.1\|5126420_5128928_-	hypothetical protein	NA	NA	NA	NA
WP_077754475.1\|5128917_5129793_-	hypothetical protein	NA	NA	NA	NA
WP_169915873.1\|5129785_5133838_-\|plate	baseplate J/gp47 family protein	NA	NA	NA	NA
WP_077754477.1\|5133909_5134326_-	GPW/gp25 family protein	NA	NA	NA	NA
WP_077754478.1\|5134345_5134645_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_077754479.1\|5134655_5136446_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_077754480.1\|5136470_5137112_-	peptidoglycan-binding protein	NA	NA	NA	NA
WP_169915875.1\|5137120_5137291_-	hypothetical protein	NA	NA	NA	NA
WP_077754481.1\|5137294_5137768_-\|tail	phage tail protein	NA	NA	NA	NA
WP_077754482.1\|5137841_5138315_-\|tail	phage tail protein	A0A059XP41	uncultured_phage	1.1e-23	49.6
WP_077751231.1\|5139392_5140520_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_077751384.1\|5141214_5142357_-\|transposase	IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

5271339 : 5284170

Tupanvirus(20.0%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077755829.1\|5271339_5272242_-\|protease	zinc metalloprotease	A0A2K9KZL9	Tupanvirus	2.8e-15	36.4
WP_077751527.1\|5272431_5272722_+	hypothetical protein	NA	NA	NA	NA
WP_077751064.1\|5272721_5273066_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_077751526.1\|5273093_5274656_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.2e-45	28.8
WP_077754592.1\|5274846_5275626_+	AAA family ATPase	H7BUL8	unidentified_phage	2.6e-14	29.7
WP_077754593.1\|5275618_5276023_+	hypothetical protein	NA	NA	NA	NA
WP_077754594.1\|5276231_5276504_-	hypothetical protein	NA	NA	NA	NA
WP_077754595.1\|5277208_5278012_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_077752481.1\|5278076_5278994_+\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	1.4e-96	59.1
WP_077754596.1\|5279035_5279365_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_077754597.1\|5279547_5281473_+	hypothetical protein	NA	NA	NA	NA
WP_169915629.1\|5282081_5282381_+	hypothetical protein	NA	NA	NA	NA
WP_077754598.1\|5282529_5284170_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	9.1e-25	25.7

DBSCAN-SWA_9

5289054 : 5348534

uncultured_Caudovirales_phage(22.22%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149027232.1\|5289054_5290211_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	3.4e-42	39.3
WP_149027337.1\|5290352_5290697_+	hypothetical protein	NA	NA	NA	NA
WP_077754603.1\|5290693_5291038_+	hypothetical protein	NA	NA	NA	NA
WP_149027338.1\|5291347_5291485_-	arylsulfatase	NA	NA	NA	NA
WP_149027339.1\|5293414_5294335_-	hypothetical protein	NA	NA	NA	NA
WP_169915883.1\|5294851_5295025_+	hypothetical protein	NA	NA	NA	NA
WP_077754608.1\|5295678_5296005_+	hypothetical protein	NA	NA	NA	NA
WP_077754609.1\|5296044_5296710_-	XRE family transcriptional regulator	A0A1C6ZDG7	Pseudomonas_phage	4.2e-05	27.1
WP_149027340.1\|5297097_5297373_+	hypothetical protein	NA	NA	NA	NA
WP_077754610.1\|5297662_5298589_+	P-type conjugative transfer ATPase TrbB	NA	NA	NA	NA
WP_077754612.1\|5298870_5299260_+	hypothetical protein	NA	NA	NA	NA
WP_077754613.1\|5299442_5299838_+	TrbC/VirB2 family protein	NA	NA	NA	NA
WP_077754614.1\|5299846_5300137_+	VirB3 family type IV secretion system protein	NA	NA	NA	NA
WP_077754615.1\|5300156_5300351_+	hypothetical protein	NA	NA	NA	NA
WP_077754616.1\|5300343_5302806_+	DUF87 domain-containing protein	NA	NA	NA	NA
WP_077751527.1\|5302856_5303147_+	hypothetical protein	NA	NA	NA	NA
WP_077751064.1\|5303146_5303491_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_077751526.1\|5303518_5305081_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.2e-45	28.8
WP_077754617.1\|5305154_5305862_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	3.0e-86	66.1
WP_149027341.1\|5306320_5306728_-	hypothetical protein	NA	NA	NA	NA
WP_077754620.1\|5307592_5308723_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_077754621.1\|5308853_5309177_+	hypothetical protein	NA	NA	NA	NA
WP_179948385.1\|5309202_5309664_+	hypothetical protein	NA	NA	NA	NA
WP_077754622.1\|5309782_5310094_+	hypothetical protein	NA	NA	NA	NA
WP_169915885.1\|5310634_5312329_+	ATP-binding protein	NA	NA	NA	NA
WP_077754625.1\|5312603_5312846_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	A0A2H4JBG1	uncultured_Caudovirales_phage	6.9e-22	67.5
WP_077754626.1\|5312835_5313120_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	1.4e-29	68.8
WP_077754628.1\|5313574_5314123_+	DUF2913 family protein	NA	NA	NA	NA
WP_077754630.1\|5314638_5314830_-	hypothetical protein	NA	NA	NA	NA
WP_077751384.1\|5315642_5316785_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_077754632.1\|5317106_5318141_+\|transposase	transposase	NA	NA	NA	NA
WP_077754634.1\|5319068_5320004_+	hypothetical protein	NA	NA	NA	NA
WP_077754636.1\|5320271_5320487_+	hypothetical protein	NA	NA	NA	NA
WP_077754637.1\|5321060_5321384_-	hypothetical protein	A0A0K1LL53	Rhodobacter_phage	3.5e-13	48.5
WP_077754638.1\|5321457_5321802_-	hypothetical protein	NA	NA	NA	NA
WP_077754640.1\|5321798_5322272_-	DUF957 domain-containing protein	NA	NA	NA	NA
WP_077754642.1\|5322341_5322449_-	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_077754644.1\|5322587_5323406_+	hypothetical protein	NA	NA	NA	NA
WP_077754645.1\|5324212_5324554_-	hypothetical protein	NA	NA	NA	NA
WP_077754647.1\|5324598_5325012_-	hypothetical protein	NA	NA	NA	NA
WP_077754649.1\|5325011_5327534_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_077754650.1\|5327843_5328233_-	hypothetical protein	NA	NA	NA	NA
WP_077754652.1\|5328679_5330938_-	hypothetical protein	NA	NA	NA	NA
WP_077754653.1\|5331513_5331996_+	hypothetical protein	NA	NA	NA	NA
WP_077754656.1\|5332090_5332483_-	H-NS histone family protein	NA	NA	NA	NA
WP_077754658.1\|5332979_5334875_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_149027343.1\|5335329_5335731_-	hypothetical protein	NA	NA	NA	NA
WP_077754662.1\|5336606_5338283_+	DUF3560 domain-containing protein	H7BV66	unidentified_phage	1.9e-17	36.0
WP_077754664.1\|5338608_5339031_+\|transposase	transposase family protein	NA	NA	NA	NA
WP_169915887.1\|5339008_5339890_+\|transposase	transposase	NA	NA	NA	NA
WP_077754668.1\|5340217_5341786_+	hypothetical protein	Q3LZQ7	Bacteriophage	3.9e-57	57.0
WP_077754670.1\|5341912_5342566_-\|transposase	transposase	NA	NA	NA	NA
WP_077754672.1\|5342680_5343961_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_169915889.1\|5344229_5346284_+	TonB-dependent receptor	NA	NA	NA	NA
WP_077754676.1\|5346373_5347102_-	UPF0236 family protein	NA	NA	NA	NA
WP_077754678.1\|5347098_5347740_-	hypothetical protein	NA	NA	NA	NA
WP_077754680.1\|5347775_5348534_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_10

5429500 : 5458443

Acidithiobacillus_phage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077751384.1\|5429500_5430643_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_077754760.1\|5430831_5431095_+	YdcH family protein	NA	NA	NA	NA
WP_077754761.1\|5431816_5432209_-	RidA family protein	NA	NA	NA	NA
WP_077754762.1\|5432827_5433775_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_077754763.1\|5434502_5434754_+	EAL domain-containing protein	NA	NA	NA	NA
WP_169915909.1\|5434794_5435352_+	EAL domain-containing protein	NA	NA	NA	NA
WP_077754766.1\|5436911_5437658_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	3.4e-51	43.2
WP_077754767.1\|5437671_5439219_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	7.1e-120	42.8
WP_077754768.1\|5439442_5440210_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_149027345.1\|5440329_5440740_+	hypothetical protein	NA	NA	NA	NA
WP_077751384.1\|5441106_5442249_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_077754771.1\|5442472_5443537_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_077754772.1\|5445346_5445847_-	hypothetical protein	NA	NA	NA	NA
WP_149027346.1\|5445989_5446325_-	prepilin peptidase	NA	NA	NA	NA
WP_077754774.1\|5446321_5447344_-	type II secretion system F family protein	NA	NA	NA	NA
WP_169915912.1\|5447321_5448338_-	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
WP_077754776.1\|5448368_5448872_-	hypothetical protein	NA	NA	NA	NA
WP_077754777.1\|5448875_5449361_-	hypothetical protein	NA	NA	NA	NA
WP_077754778.1\|5449361_5450165_-	hypothetical protein	NA	NA	NA	NA
WP_077754779.1\|5450167_5450665_-	hypothetical protein	NA	NA	NA	NA
WP_077754780.1\|5450661_5452083_-	hypothetical protein	NA	NA	NA	NA
WP_077754781.1\|5452069_5452435_-	TcpQ domain-containing protein	NA	NA	NA	NA
WP_077754782.1\|5452431_5453817_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_077754783.1\|5453906_5454527_-	type II secretion system protein	NA	NA	NA	NA
WP_077751384.1\|5455409_5456552_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_077752481.1\|5457525_5458443_+\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	1.4e-96	59.1

DBSCAN-SWA_11

5732463 : 5804918

Vibrio_phage(28.57%)

protease,integrase,terminase,portal,tRNA

attL 5798165:5798181|attR 5804051:5804067

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077754971.1\|5732463_5732982_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	9.2e-24	47.4
WP_077754972.1\|5732981_5733611_-	stringent starvation protein A	NA	NA	NA	NA
WP_077754973.1\|5733719_5734442_-	cytochrome c1	NA	NA	NA	NA
WP_077754974.1\|5734441_5735656_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA
WP_077754975.1\|5735655_5736246_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA
WP_077754976.1\|5736572_5737451_-\|protease	protease modulator HflC	NA	NA	NA	NA
WP_077754977.1\|5737453_5738596_-\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
WP_077754978.1\|5738637_5739936_-	GTPase HflX	NA	NA	NA	NA
WP_077754979.1\|5739955_5740234_-	RNA chaperone Hfq	NA	NA	NA	NA
WP_077754980.1\|5740328_5741255_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_077754981.1\|5741300_5743166_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	6.4e-59	41.5
WP_077754982.1\|5743216_5744539_-	N-acetylmuramoyl-L-alanine amidase	A0A067ZJB6	Vibrio_phage	2.7e-19	31.9
WP_077754983.1\|5744541_5745000_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
WP_077754984.1\|5745102_5746602_-	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA
WP_077754985.1\|5746875_5747331_-	hypothetical protein	NA	NA	NA	NA
WP_077754986.1\|5748309_5748855_-	oligoribonuclease	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	3.3e-24	37.4
WP_077754987.1\|5748967_5750023_+	small ribosomal subunit biogenesis GTPase RsgA	NA	NA	NA	NA
WP_077754988.1\|5750056_5750920_+	phosphatidylserine decarboxylase	NA	NA	NA	NA
WP_077754989.1\|5750959_5751835_+	DMT family transporter	NA	NA	NA	NA
WP_077755856.1\|5752017_5755218_+	mechanosensitive ion channel	NA	NA	NA	NA
WP_077754990.1\|5755217_5755910_+	glycerophosphodiester phosphodiesterase	M1HJV8	Acanthocystis_turfacea_Chlorella_virus	8.0e-15	29.0
WP_077754991.1\|5756045_5756378_-	DUF3392 domain-containing protein	NA	NA	NA	NA
WP_077754992.1\|5756437_5757364_+	D-2-hydroxyacid dehydrogenase	NA	NA	NA	NA
WP_077754993.1\|5757431_5759009_-	methyl-accepting chemotaxis protein	A0A1B0V854	Salmonella_phage	8.4e-44	50.0
WP_077754994.1\|5759274_5759466_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA
WP_077754995.1\|5759564_5761838_-	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	2.9e-85	34.8
WP_077754996.1\|5761834_5762998_-	PQQ-dependent sugar dehydrogenase	NA	NA	NA	NA
WP_077754997.1\|5763043_5764930_-	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	6.4e-91	34.6
WP_077754998.1\|5764985_5765558_-	esterase YqiA	NA	NA	NA	NA
WP_077754999.1\|5765763_5766603_-	3',5'-cyclic-AMP phosphodiesterase	NA	NA	NA	NA
WP_077755000.1\|5766615_5767062_-	DUF1249 domain-containing protein	NA	NA	NA	NA
WP_077755001.1\|5767714_5768326_-	ADP-ribose diphosphatase	NA	NA	NA	NA
WP_077755002.1\|5768659_5770006_+	outer membrane channel protein TolC	NA	NA	NA	NA
WP_077755003.1\|5770213_5770963_-	TIGR04219 family outer membrane beta-barrel protein	NA	NA	NA	NA
WP_077755004.1\|5770970_5771942_-	DUF2333 family protein	NA	NA	NA	NA
WP_077755005.1\|5771972_5772449_-	copper chaperone PCu(A)C	NA	NA	NA	NA
WP_077755006.1\|5772481_5773219_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_077755857.1\|5773324_5773630_-	hypothetical protein	NA	NA	NA	NA
WP_077755007.1\|5773710_5773929_-	PspC domain-containing protein	NA	NA	NA	NA
WP_077755008.1\|5774075_5774375_-	hypothetical protein	NA	NA	NA	NA
WP_077755009.1\|5774657_5775683_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_077755010.1\|5775771_5776866_+\|integrase	site-specific integrase	A0A1W6JP34	Morganella_phage	1.7e-120	57.4
WP_077755011.1\|5776897_5777329_-	hypothetical protein	NA	NA	NA	NA
WP_077755012.1\|5777353_5777566_-	hypothetical protein	NA	NA	NA	NA
WP_077755858.1\|5777570_5779340_-	hypothetical protein	A0A2I7QS09	Vibrio_phage	6.2e-136	43.1
WP_077755013.1\|5779411_5779711_-	hypothetical protein	NA	NA	NA	NA
WP_077755014.1\|5779703_5780693_-	hypothetical protein	A0A088C4T9	Shewanella_sp._phage	8.7e-31	29.5
WP_077755015.1\|5780718_5783133_-	hypothetical protein	A0A2I7QRV0	Vibrio_phage	1.0e-213	47.5
WP_077755016.1\|5783140_5783512_-	hypothetical protein	A0A088C532	Shewanella_sp._phage	1.6e-17	40.0
WP_077755017.1\|5783511_5787366_-	tape measure protein	A0A2I7S9D9	Vibrio_phage	1.2e-35	32.3
WP_077755018.1\|5787474_5788194_-	hypothetical protein	A0A2I7S8N4	Vibrio_phage	1.2e-26	36.4
WP_077755019.1\|5788190_5788616_-	hypothetical protein	NA	NA	NA	NA
WP_077755020.1\|5788642_5789206_-	hypothetical protein	NA	NA	NA	NA
WP_077755021.1\|5789223_5789562_-	hypothetical protein	NA	NA	NA	NA
WP_077755022.1\|5789554_5789875_-	DUF2190 family protein	K7PJY3	Enterobacterial_phage	1.3e-12	46.2
WP_077755023.1\|5789962_5791960_-\|protease	Clp protease ClpP	A0A1W6JT88	Pseudomonas_phage	5.8e-207	57.3
WP_077755024.1\|5791937_5793506_-\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	7.2e-112	47.5
WP_077755025.1\|5793538_5793742_-	hypothetical protein	A0A1B0YZU1	Pseudomonas_phage	1.6e-08	57.1
WP_077755026.1\|5793738_5795730_-\|terminase	phage terminase large subunit family protein	A0A1B0Z2K0	Pseudomonas_phage	7.5e-191	49.5
WP_077755027.1\|5795704_5796238_-\|terminase	terminase small subunit	R9TRM5	Vibrio_phage	2.8e-36	50.6
WP_169915940.1\|5796247_5796481_-	hypothetical protein	A0A1B1ITN8	uncultured_Mediterranean_phage	2.7e-07	39.5
WP_077755029.1\|5796633_5796930_-	hypothetical protein	NA	NA	NA	NA
WP_077755030.1\|5796991_5797591_-	lysozyme	A0A1B1ITF9	uncultured_Mediterranean_phage	3.8e-37	51.9
WP_077755031.1\|5797626_5797962_-	DUF4406 domain-containing protein	A0A222YYT7	Escherichia_phage	2.8e-21	54.9
5798165:5798181	attL	NA	NA	NA	NA
WP_077755032.1\|5798835_5799177_+	helix-turn-helix transcriptional regulator	Q8H9R3	Vibrio_phage	5.9e-27	55.8
WP_077755033.1\|5799453_5799657_+	hypothetical protein	NA	NA	NA	NA
WP_077755859.1\|5799730_5800060_-	hypothetical protein	NA	NA	NA	NA
WP_077755034.1\|5800079_5800298_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_077755035.1\|5800353_5801604_-\|integrase	tyrosine-type recombinase/integrase	A0A2D1GND4	Pseudomonas_phage	1.2e-56	35.0
WP_077755036.1\|5801770_5802445_-	replication protein P	NA	NA	NA	NA
WP_149027358.1\|5802441_5803185_-	helix-turn-helix domain-containing protein	D0UIL5	Aggregatibacter_phage	2.9e-31	38.9
WP_169915942.1\|5803347_5803515_+	hypothetical protein	NA	NA	NA	NA
WP_077755037.1\|5803711_5804281_-	hypothetical protein	NA	NA	NA	NA
5804051:5804067	attR	NA	NA	NA	NA
WP_077755038.1\|5804273_5804918_-	hypothetical protein	A0A1V0E8D0	Vibrio_phage	3.4e-44	53.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP014782

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection