CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019040	Bacillus velezensis strain GH1-13 chromosome, complete genome	0 crisprs	csa3,RT,DinG,casR,cas3,DEDDh,WYL	0	0	8	0
NZ_CP019039	Bacillus velezensis strain GH1-13 plasmid unnamed, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

665639 : 675530

Synechococcus_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007408896.1\|665639_666932_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.5e-19	27.3
WP_003155762.1\|667007_667727_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3G7P8	Synechococcus_phage	5.2e-49	45.2
WP_003155758.1\|667726_667981_+	phosphoribosylformylglycinamidine synthase subunit PurS	M4QPE7	Synechococcus_phage	4.7e-05	33.3
WP_007408898.1\|667977_668661_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_077721898.1\|668644_670873_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	5.5e-158	40.7
WP_077721899.1\|670848_672279_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	4.8e-54	32.5
WP_003155753.1\|672370_673411_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	2.4e-63	41.1
WP_077721900.1\|673407_673995_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	3.5e-27	39.9
WP_025853962.1\|673991_675530_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	8.7e-78	50.8

DBSCAN-SWA_2

1215043 : 1246875

Bacillus_phage(30.0%)

holin,portal,terminase,capsid,plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087920760.1\|1215043_1216180_+	S9 family peptidase	A0A1P8CWN8	Bacillus_phage	1.3e-94	47.9
WP_003154881.1\|1216169_1216304_+	PhrA family phosphatase inhibitor	NA	NA	NA	NA
WP_077722093.1\|1216445_1217399_+	N-acetylmuramoyl-L-alanine amidase	A0A218KC88	Bacillus_phage	1.4e-62	69.3
WP_007610770.1\|1217437_1217815_-	PH domain-containing protein	A5GYQ0	Lactococcus_phage	1.5e-15	41.4
WP_077722094.1\|1217923_1218529_+	poly-gamma-glutamate hydrolase family protein	A0A0Y0AJU6	Bacillus_phage	2.8e-40	46.8
WP_172614616.1\|1218518_1218668_+	hypothetical protein	NA	NA	NA	NA
WP_003154873.1\|1218683_1219274_-	ImmA/IrrE family metallo-endopeptidase	A0A2H4JA43	uncultured_Caudovirales_phage	3.0e-39	51.7
WP_003154871.1\|1219422_1219761_-	helix-turn-helix transcriptional regulator	A0A2H4J6F9	uncultured_Caudovirales_phage	8.4e-18	45.8
WP_003154869.1\|1219952_1220132_+	hypothetical protein	NA	NA	NA	NA
WP_077722095.1\|1220121_1220949_+\|portal	phage portal protein	S6BFM4	Thermus_phage	1.3e-19	49.0
WP_063174228.1\|1220848_1221649_+	ATP-binding protein	A6XMI1	Bacillus_virus	6.1e-59	45.1
WP_095836059.1\|1221648_1221816_+	hypothetical protein	NA	NA	NA	NA
WP_039251797.1\|1221913_1222255_+	hypothetical protein	NA	NA	NA	NA
WP_003154859.1\|1222244_1222448_+	hypothetical protein	A0A2H4J4M6	uncultured_Caudovirales_phage	5.4e-12	48.5
WP_017417605.1\|1222561_1223074_+	sigma-70 family RNA polymerase sigma factor	A0A0K2CNQ1	Brevibacillus_phage	2.9e-22	43.9
WP_025851819.1\|1223186_1223984_+\|terminase	terminase small subunit	A0A0S2MVB6	Bacillus_phage	7.2e-60	49.8
WP_077722096.1\|1223980_1225279_+\|terminase	PBSX family phage terminase large subunit	M4ZRM5	Bacillus_phage	9.4e-150	58.9
WP_088037172.1\|1225327_1226707_+\|portal	phage portal protein	A0A1B1P7C8	Bacillus_phage	2.3e-138	55.6
WP_015417286.1\|1226738_1227584_+	hypothetical protein	A0A1B1P7E4	Bacillus_phage	4.3e-55	57.6
WP_003154848.1\|1227610_1228546_+\|capsid	phage major capsid protein	A0A1B1P7E3	Bacillus_phage	2.5e-104	62.8
WP_070081674.1\|1228562_1228946_+	DUF3199 family protein	NA	NA	NA	NA
WP_003154844.1\|1228942_1229299_+	DUF3599 family protein	NA	NA	NA	NA
WP_014304847.1\|1229295_1229799_+	HK97 gp10 family phage protein	NA	NA	NA	NA
WP_039251775.1\|1229795_1230242_+	hypothetical protein	NA	NA	NA	NA
WP_003154839.1\|1230238_1230448_+	hypothetical protein	NA	NA	NA	NA
WP_044053125.1\|1230447_1231845_+\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A0A7RTT5	Clostridium_phage	9.0e-82	40.4
WP_003154837.1\|1231846_1232290_+\|tail	phage tail tube protein	A0A0K2CNG3	Brevibacillus_phage	8.4e-26	45.2
WP_032874591.1\|1232365_1232812_+\|portal	phage portal protein	A0A0A7RTY8	Clostridium_phage	1.0e-10	35.8
WP_015239684.1\|1232853_1233006_+	hypothetical protein	NA	NA	NA	NA
WP_077722097.1\|1232993_1238033_+	transglycosylase SLT domain-containing protein	A0A1L2JY60	Aeribacillus_phage	1.9e-41	46.6
WP_077722098.1\|1238025_1238685_+	LysM peptidoglycan-binding domain-containing protein	G3MBQ1	Bacillus_virus	3.1e-08	44.2
WP_077722099.1\|1238698_1239676_+\|portal	phage portal protein	A0A1L6BY20	Clostridium_phage	3.7e-34	30.9
WP_070081678.1\|1239675_1239942_+	DUF2577 family protein	S6C459	Thermus_phage	1.2e-06	38.6
WP_003154825.1\|1240045_1240471_+	DUF2634 domain-containing protein	A0A2H4J6K5	uncultured_Caudovirales_phage	1.5e-11	35.9
WP_070081679.1\|1240463_1241510_+\|plate	baseplate J/gp47 family protein	S6AVU3	Thermus_phage	1.0e-69	44.1
WP_007407262.1\|1241493_1242072_+	YmfQ family protein	A0A2H4J717	uncultured_Caudovirales_phage	3.1e-12	31.0
WP_003154822.1\|1242068_1242341_+	hypothetical protein	NA	NA	NA	NA
WP_077722100.1\|1242343_1243933_+	hypothetical protein	A0A2H4J4R1	uncultured_Caudovirales_phage	6.3e-15	55.4
WP_077722101.1\|1243945_1244371_+	hypothetical protein	NA	NA	NA	NA
WP_070081682.1\|1244375_1244573_+	XkdX family protein	A0A2H4JAA1	uncultured_Caudovirales_phage	4.3e-14	63.6
WP_070081683.1\|1244629_1245391_+\|portal	phage portal protein	NA	NA	NA	NA
WP_003154815.1\|1245442_1245706_+	hemolysin XhlA family protein	A0A2H4JD40	uncultured_Caudovirales_phage	8.8e-23	63.1
WP_003154813.1\|1245719_1245983_+\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	2.3e-23	65.5
WP_024085195.1\|1245996_1246875_+	N-acetylmuramoyl-L-alanine amidase	Q9ZXD7	Bacillus_phage	4.8e-81	60.5

DBSCAN-SWA_3

1812109 : 1823593

Bacillus_phage(100.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077723159.1\|1812109_1812592_+	SMI1/KNR4 family protein	A0A1P8CWM6	Bacillus_phage	2.2e-59	66.2
WP_076982784.1\|1812884_1812974_-\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_077722233.1\|1813217_1813421_+	hypothetical protein	NA	NA	NA	NA
WP_077722234.1\|1813549_1814308_+	sporulation protein YunB	NA	NA	NA	NA
WP_064778347.1\|1814525_1814858_+	YolD-like family protein	A0A1P8CWP2	Bacillus_phage	6.9e-41	73.6
WP_077722235.1\|1814850_1816101_+	UV damage repair protein UvrX	O64031	Bacillus_phage	1.6e-223	92.1
WP_077722236.1\|1816264_1817425_-	tetratricopeptide repeat protein	A0A1P8CWN8	Bacillus_phage	2.0e-34	26.8
WP_099762739.1\|1817576_1817882_-	hypothetical protein	NA	NA	NA	NA
WP_014470077.1\|1818220_1818472_-\|holin	phage holin	A0A1P8CWN5	Bacillus_phage	6.9e-33	85.5
WP_014472511.1\|1818484_1818856_-	hypothetical protein	NA	NA	NA	NA
WP_077722237.1\|1818962_1820009_-	N-acetylmuramoyl-L-alanine amidase family protein	A0A1J0MS59	Bacillus_phage	3.1e-79	50.5
WP_077723160.1\|1820181_1822734_-	hypothetical protein	D6R401	Bacillus_phage	1.4e-144	36.6
WP_061573906.1\|1822777_1823593_-	hypothetical protein	A0A1P8CWP7	Bacillus_phage	6.0e-94	62.8

DBSCAN-SWA_4

1827730 : 1845333

Bacillus_phage(91.67%)

integrase,tail

attL 1825753:1825768|attR 1851905:1851920

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1825753:1825768	attL	NA	NA	NA	NA
WP_077722239.1\|1827730_1834615_-\|tail	phage tail tape measure protein	A0A1P8CWQ1	Bacillus_phage	0.0e+00	80.8
WP_077722240.1\|1834678_1835305_-	hypothetical protein	A0A0H3UZD5	Geobacillus_virus	4.7e-22	30.8
WP_014472045.1\|1835376_1835787_-	hypothetical protein	NA	NA	NA	NA
WP_014472044.1\|1835853_1836012_-	hypothetical protein	NA	NA	NA	NA
WP_014472043.1\|1836072_1836780_+	hypothetical protein	NA	NA	NA	NA
WP_077723161.1\|1836859_1837075_-	hypothetical protein	NA	NA	NA	NA
WP_077722241.1\|1837119_1838121_-\|integrase	site-specific integrase	A0A1P8CWP6	Bacillus_phage	1.7e-170	86.7
WP_077722242.1\|1838134_1838551_-	hypothetical protein	A0A1P8CWQ4	Bacillus_phage	1.9e-43	64.0
WP_077722243.1\|1838550_1839036_-	hypothetical protein	A0A1P8CWQ6	Bacillus_phage	3.1e-58	72.3
WP_077722244.1\|1839118_1839967_-	hypothetical protein	NA	NA	NA	NA
WP_014470095.1\|1839985_1840138_-	XkdX family protein	NA	NA	NA	NA
WP_014470096.1\|1840138_1840414_-	hypothetical protein	M4ZR44	Bacillus_phage	1.2e-09	36.2
WP_077722245.1\|1840427_1841759_-	hypothetical protein	A0A1P8CWR7	Bacillus_phage	2.9e-21	42.6
WP_062623492.1\|1841758_1842115_-	hypothetical protein	O64055	Bacillus_phage	8.2e-48	79.7
WP_077722246.1\|1842186_1842588_-	hypothetical protein	NA	NA	NA	NA
WP_077722247.1\|1842608_1843403_-	hypothetical protein	A0A1P8CWR0	Bacillus_phage	9.8e-17	34.9
WP_077722248.1\|1843442_1844168_-	hypothetical protein	A0A1P8CWQ7	Bacillus_phage	6.6e-28	33.6
WP_077722249.1\|1844164_1844671_-	hypothetical protein	O64060	Bacillus_phage	9.9e-63	67.3
WP_077722250.1\|1844667_1845333_-	hypothetical protein	A0A1P8CWR8	Bacillus_phage	1.5e-47	50.3
1851905:1851920	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1857630 : 1864120

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077722257.1\|1857630_1857906_-	HU family DNA-binding protein	A0A1P8CWT5	Bacillus_phage	3.5e-38	93.4
WP_077722258.1\|1858158_1858785_-	hypothetical protein	A0A1P8CWS4	Bacillus_phage	8.4e-80	71.1
WP_064778375.1\|1859006_1859909_-	GIY-YIG nuclease family protein	G3MAX5	Bacillus_virus	4.7e-07	36.4
WP_154066750.1\|1860091_1861948_-	hypothetical protein	O64076	Bacillus_phage	0.0e+00	86.2
WP_014417885.1\|1862009_1862189_-	hypothetical protein	A0A1P8CWT4	Bacillus_phage	1.5e-18	71.2
WP_077722260.1\|1862308_1862545_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_077722261.1\|1862723_1863008_+	hypothetical protein	NA	NA	NA	NA
WP_077722262.1\|1863007_1864120_+	hypothetical protein	G3MBK4	Bacillus_virus	4.9e-30	29.8

DBSCAN-SWA_6

1880097 : 1945613

103

Bacillus_phage(89.19%)

integrase

attL 1883866:1883884|attR 1916305:1916323

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014417903.1\|1880097_1880280_-	hypothetical protein	A0A1P8CWV7	Bacillus_phage	1.7e-25	87.9
WP_077722281.1\|1880350_1880602_+	hypothetical protein	A0A1P8CWV6	Bacillus_phage	3.5e-21	62.2
WP_077722282.1\|1880604_1880820_+	hypothetical protein	A0A1P8CWW0	Bacillus_phage	3.0e-13	54.9
WP_154066722.1\|1880831_1880963_+	hypothetical protein	A0A1P8CWV9	Bacillus_phage	2.3e-16	87.8
WP_077722283.1\|1880993_1881530_+	super-infection exclusion protein B	O64091	Bacillus_phage	1.7e-84	87.6
WP_077722284.1\|1881592_1882018_+	hypothetical protein	O64093	Bacillus_phage	4.3e-51	73.2
WP_077722285.1\|1882215_1883364_+	hypothetical protein	NA	NA	NA	NA
WP_124692917.1\|1883385_1883526_+	lysogeny pheromone AimP family peptide	NA	NA	NA	NA
WP_014472001.1\|1883647_1883803_+	hypothetical protein	A0A1P8CWW2	Bacillus_phage	8.3e-13	68.6
1883866:1883884	attL	NA	NA	NA	NA
WP_014472000.1\|1883952_1884165_+	hypothetical protein	A0A1P8CWW7	Bacillus_phage	1.6e-22	78.5
WP_077722286.1\|1884179_1884410_+	hypothetical protein	A0A1P8CWW1	Bacillus_phage	1.6e-20	70.8
WP_021493556.1\|1884448_1884613_+	hypothetical protein	A0A1P8CWX2	Bacillus_phage	5.1e-05	52.6
WP_077722287.1\|1884622_1885681_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8CWW9	Bacillus_phage	2.1e-155	76.3
WP_014471996.1\|1885757_1887107_+	hypothetical protein	A0A1P8CWX1	Bacillus_phage	2.5e-190	75.7
WP_077722288.1\|1887127_1888111_+\|integrase	integrase	A0A1P8CWX4	Bacillus_phage	5.6e-139	77.7
WP_021493552.1\|1888331_1888553_-	helix-turn-helix transcriptional regulator	A0A1P8CWW6	Bacillus_phage	2.2e-27	79.5
WP_077722289.1\|1888718_1889018_+	hypothetical protein	A0A1P8CWX3	Bacillus_phage	2.1e-20	51.0
WP_077722290.1\|1889092_1889326_+	hypothetical protein	A0A1P8CWW5	Bacillus_phage	5.4e-16	54.9
WP_077722291.1\|1889692_1890115_+	hypothetical protein	D7RWN3	Brochothrix_phage	3.4e-08	36.6
WP_172802829.1\|1890111_1890282_+	hypothetical protein	A0A2H4JCE7	uncultured_Caudovirales_phage	4.4e-07	60.5
WP_077722292.1\|1890278_1890485_+	hypothetical protein	NA	NA	NA	NA
WP_077722293.1\|1890481_1890793_+	hypothetical protein	NA	NA	NA	NA
WP_077722294.1\|1890789_1890996_+	hypothetical protein	NA	NA	NA	NA
WP_014471986.1\|1891044_1891281_+	hypothetical protein	NA	NA	NA	NA
WP_077722295.1\|1892415_1892700_+	hypothetical protein	NA	NA	NA	NA
WP_077722296.1\|1892744_1893020_+	hypothetical protein	NA	NA	NA	NA
WP_077722297.1\|1893099_1893726_+	DUF1273 family protein	A0A1P8CWY2	Bacillus_phage	1.7e-104	88.3
WP_077722298.1\|1893741_1893981_+	hypothetical protein	NA	NA	NA	NA
WP_077722299.1\|1894042_1894660_+	hypothetical protein	NA	NA	NA	NA
WP_077722300.1\|1894860_1895073_+	hypothetical protein	A0A1P8CX01	Bacillus_phage	7.8e-30	95.8
WP_014470178.1\|1895086_1895461_-	hypothetical protein	A0A1P8CWZ2	Bacillus_phage	1.7e-35	63.4
WP_014470179.1\|1895575_1895740_+	hypothetical protein	NA	NA	NA	NA
WP_077722301.1\|1895828_1896347_+	hypothetical protein	U5PUK4	Bacillus_phage	3.4e-42	49.4
WP_154066723.1\|1896434_1896587_-	hypothetical protein	A0A1P8CWZ1	Bacillus_phage	6.0e-16	80.0
WP_077722302.1\|1897716_1898082_+	hypothetical protein	NA	NA	NA	NA
WP_077722303.1\|1898194_1899007_-	hypothetical protein	O64130	Bacillus_phage	5.3e-135	85.6
WP_077722304.1\|1899076_1899751_-	SOS response-associated peptidase	A0A1P8CX02	Bacillus_phage	5.5e-77	96.5
WP_077722305.1\|1899822_1900038_+	hypothetical protein	O64132	Bacillus_phage	1.7e-27	82.6
WP_077722306.1\|1900107_1900485_+	hypothetical protein	A8ASN9	Listeria_phage	1.2e-17	41.2
WP_154066724.1\|1900581_1901409_+	poly-gamma-glutamate hydrolase family protein	O64134	Bacillus_phage	1.2e-94	64.2
WP_077722307.1\|1901405_1903148_+	right-handed parallel beta-helix repeat-containing protein	O64135	Bacillus_phage	8.8e-220	63.8
WP_077722308.1\|1903260_1903785_+	hypothetical protein	NA	NA	NA	NA
WP_061573817.1\|1904126_1904504_+	hypothetical protein	A0A1P8CX06	Bacillus_phage	4.5e-52	77.0
WP_166460972.1\|1904609_1904777_+	hypothetical protein	NA	NA	NA	NA
WP_077722309.1\|1905035_1905416_+	hypothetical protein	A0A1P8CX10	Bacillus_phage	3.1e-53	79.2
WP_077722310.1\|1905437_1906352_+	hypothetical protein	O64140	Bacillus_phage	4.1e-152	88.2
WP_077722311.1\|1906440_1907412_+	ATP-binding protein	A0A1P8CX29	Bacillus_phage	1.9e-171	94.7
WP_077722312.1\|1907453_1907924_+	hypothetical protein	A0A1P8CX08	Bacillus_phage	2.1e-38	46.8
WP_077722313.1\|1907938_1909456_+	hypothetical protein	A0A1P8CWZ7	Bacillus_phage	2.7e-212	71.9
WP_077722314.1\|1909471_1910608_+	hypothetical protein	A0A1P8CX05	Bacillus_phage	5.1e-208	90.5
WP_077722315.1\|1910607_1912335_+	single-stranded-DNA-specific exonuclease RecJ	A0A1P8CX07	Bacillus_phage	4.0e-273	80.7
WP_077722316.1\|1912347_1916277_+	DNA polymerase III subunit alpha	A0A1P8CX14	Bacillus_phage	0.0e+00	81.6
WP_077722317.1\|1916303_1917011_+	hypothetical protein	A0A1P8CX16	Bacillus_phage	1.9e-24	36.3
1916305:1916323	attR	NA	NA	NA	NA
WP_014417936.1\|1917022_1917226_+	YorP family protein	O64150	Bacillus_phage	1.0e-26	80.6
WP_172802830.1\|1917230_1917389_+	hypothetical protein	A0A1P8CX36	Bacillus_phage	3.2e-12	64.7
WP_077722318.1\|1917385_1917883_+	AAA family ATPase	A0A1P8CX28	Bacillus_phage	1.9e-66	75.6
WP_077722319.1\|1918187_1919105_+	DNA cytosine methyltransferase	F4YCI6	Synechococcus_phage	7.8e-58	46.5
WP_077722320.1\|1919155_1919374_+	hypothetical protein	O64155	Bacillus_phage	5.6e-15	60.0
WP_077722323.1\|1920156_1920354_+	hypothetical protein	A0A1U9WQN5	Geobacillus_phage	3.6e-13	54.2
WP_077722324.1\|1920411_1920882_+	hypothetical protein	O64162	Bacillus_phage	2.1e-75	87.2
WP_077722325.1\|1921020_1921374_+	hypothetical protein	NA	NA	NA	NA
WP_077722326.1\|1921436_1921859_+	hypothetical protein	A0A1P8CX27	Bacillus_phage	4.0e-41	62.4
WP_077722327.1\|1921899_1922397_+	adenine methyltransferase	S5MUL8	Brevibacillus_phage	4.2e-50	56.3
WP_077722328.1\|1922444_1922807_+	hypothetical protein	O64166	Bacillus_phage	6.2e-51	84.2
WP_154066725.1\|1922905_1923124_+	hypothetical protein	NA	NA	NA	NA
WP_154066751.1\|1923089_1923323_+	DUF1653 domain-containing protein	A0A1P8CX21	Bacillus_phage	9.5e-13	75.0
WP_077722329.1\|1923373_1923706_+	hypothetical protein	O64168	Bacillus_phage	2.9e-15	90.7
WP_154066726.1\|1923740_1923890_+	hypothetical protein	NA	NA	NA	NA
WP_077722330.1\|1923908_1924265_+	hypothetical protein	O64171	Bacillus_phage	5.9e-22	47.5
WP_077722331.1\|1924261_1924657_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A1P8CX56	Bacillus_phage	2.6e-55	83.2
WP_154066752.1\|1924664_1925342_+	ribonucleotide-diphosphate reductase subunit alpha	A0A1P8CX40	Bacillus_phage	9.6e-122	96.9
WP_077722333.1\|1925445_1926129_+	HNH endonuclease	L0LCB9	Bacillus_phage	4.4e-50	58.1
WP_038458547.1\|1927960_1928185_+	hypothetical protein	NA	NA	NA	NA
WP_077722337.1\|1928876_1929398_+	HNH endonuclease	A0A1P8CX39	Bacillus_phage	5.0e-94	95.4
WP_077722339.1\|1929978_1930221_+	thioredoxin family protein	A0A1P8CX24	Bacillus_phage	4.0e-30	77.5
WP_077722340.1\|1930462_1931077_+	hypothetical protein	A0A127AYS1	Bacillus_phage	2.1e-43	42.2
WP_172424409.1\|1931186_1931351_+	hypothetical protein	NA	NA	NA	NA
WP_077722341.1\|1931470_1931869_+	hypothetical protein	NA	NA	NA	NA
WP_077722342.1\|1932028_1932328_+	hypothetical protein	A0A1P8CX63	Bacillus_phage	1.6e-20	54.3
WP_077722344.1\|1932799_1933639_+	thymidylate synthase	A0A1P8CX42	Bacillus_phage	1.2e-150	90.0
WP_077722345.1\|1933638_1934145_+	dihydrofolate reductase	A0A0H3UYW4	Geobacillus_virus	8.1e-33	40.9
WP_077722346.1\|1934273_1934639_+	hypothetical protein	NA	NA	NA	NA
WP_077722347.1\|1934698_1935070_+	hypothetical protein	NA	NA	NA	NA
WP_077722348.1\|1935248_1935626_+	hypothetical protein	R4JDR8	Bacillus_phage	4.3e-63	89.5
WP_057080429.1\|1936538_1936832_+	hypothetical protein	NA	NA	NA	NA
WP_057080430.1\|1936849_1937053_+	hypothetical protein	A0A1P8CX65	Bacillus_phage	1.1e-17	91.7
WP_046559719.1\|1937192_1937381_+	hypothetical protein	A0A1P8CX75	Bacillus_phage	2.7e-26	98.4
WP_042976081.1\|1937462_1937675_-	alpha/beta-type small acid-soluble spore protein	A0A1P8CX76	Bacillus_phage	4.1e-31	100.0
WP_077722350.1\|1937833_1938664_+	metallophosphoesterase	O64184	Bacillus_phage	4.9e-152	88.0
WP_077722351.1\|1938699_1938921_+	hypothetical protein	NA	NA	NA	NA
WP_068947650.1\|1938947_1939283_+	hypothetical protein	F8WPK8	Bacillus_phage	9.1e-41	67.0
WP_077722352.1\|1939552_1939975_+	hypothetical protein	NA	NA	NA	NA
WP_077722353.1\|1939949_1940366_+	hypothetical protein	A0A1P8CX53	Bacillus_phage	2.5e-35	69.3
WP_077722354.1\|1940362_1940701_+	hypothetical protein	NA	NA	NA	NA
WP_077722355.1\|1940749_1941298_+	hypothetical protein	NA	NA	NA	NA
WP_172802831.1\|1941298_1941469_+	hypothetical protein	O64190	Bacillus_phage	6.7e-08	59.6
WP_077722356.1\|1941465_1941729_+	hypothetical protein	NA	NA	NA	NA
WP_077722357.1\|1941920_1942142_+	hypothetical protein	U5PU52	Bacillus_phage	1.7e-19	66.7
WP_077722358.1\|1942353_1942593_-	helix-turn-helix transcriptional regulator	A0A1P8CX60	Bacillus_phage	5.0e-25	65.8
WP_077722359.1\|1942690_1943290_+	Holliday junction resolvase RecU	O64195	Bacillus_phage	1.3e-90	86.6
WP_021493449.1\|1943286_1943433_+	hypothetical protein	NA	NA	NA	NA
WP_077722360.1\|1943518_1945222_+	recombinase family protein	W8CYE4	Bacillus_phage	2.9e-18	25.3
WP_021493447.1\|1945202_1945613_+	stage V sporulation protein K	G3MAX6	Bacillus_virus	3.9e-17	40.0

DBSCAN-SWA_7

2381653 : 2387905

Staphylococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007409428.1\|2381653_2382247_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	2.6e-14	36.6
WP_007409427.1\|2382236_2382992_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	2.9e-10	25.7
WP_003153376.1\|2383199_2383289_+	YjcZ family sporulation protein	NA	NA	NA	NA
WP_077722539.1\|2383375_2383897_+	DUF309 domain-containing protein	NA	NA	NA	NA
WP_003153373.1\|2383962_2384337_-	GNAT family N-acetyltransferase RibT	NA	NA	NA	NA
WP_003153372.1\|2384453_2384918_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.2e-43	59.3
WP_077722540.1\|2384950_2386147_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	2.8e-116	54.9
WP_077722541.1\|2386161_2386809_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.5e-39	44.3
WP_077722542.1\|2386789_2387905_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.2e-55	36.6

DBSCAN-SWA_8

2738771 : 2802304

uncultured_Mediterranean_phage(25.0%)

coat,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_070082158.1\|2738771_2740046_-\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_094247699.1\|2740402_2740573_-	YrzK family protein	NA	NA	NA	NA
WP_077722641.1\|2740703_2742266_+	SH3 domain-containing protein	E5DV68	Deep-sea_thermophilic_phage	2.0e-13	33.3
WP_007408194.1\|2742293_2742737_-\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_003152714.1\|2745112_2745625_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	5.5e-29	47.2
WP_015387899.1\|2745630_2747991_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	1.4e-90	34.8
WP_003152709.1\|2748046_2748373_-	DUF1049 domain-containing protein	NA	NA	NA	NA
WP_012118088.1\|2748436_2748934_-	cation:proton antiporter regulatory subunit	NA	NA	NA	NA
WP_077722642.1\|2749065_2751285_-	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	2.0e-27	31.7
WP_007408189.1\|2751321_2751618_-	post-transcriptional regulator	NA	NA	NA	NA
WP_003152699.1\|2753296_2753953_-	DUF421 domain-containing protein	NA	NA	NA	NA
WP_003152697.1\|2754119_2754506_+	TIGR04086 family membrane protein	NA	NA	NA	NA
WP_003152695.1\|2754557_2754818_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	1.5e-06	46.9
WP_007408186.1\|2754848_2755994_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	8.1e-89	44.8
WP_077722643.1\|2756021_2757050_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_003152687.1\|2757075_2757276_-	DUF2905 domain-containing protein	NA	NA	NA	NA
WP_003152685.1\|2757268_2758273_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	4.0e-07	30.0
WP_003152683.1\|2758283_2758889_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_012118093.1\|2759023_2759533_-	BofC C-terminal domain-containing protein	NA	NA	NA	NA
WP_077722645.1\|2759917_2760496_-	YhcN/YlaJ family sporulation lipoprotein	NA	NA	NA	NA
WP_077722646.1\|2760658_2761864_-\|coat	SafA/ExsA family spore coat assembly protein	NA	NA	NA	NA
WP_025649684.1\|2761990_2763094_-	quinolinate synthase NadA	NA	NA	NA	NA
WP_077722647.1\|2763095_2763944_-	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_077722648.1\|2763925_2765491_-	L-aspartate oxidase	NA	NA	NA	NA
WP_044801621.1\|2765596_2766748_+	IscS subfamily cysteine desulfurase	A0A141ZJV0	Faustovirus	4.6e-31	29.9
WP_014305508.1\|2766744_2767287_+	transcription repressor NadR	NA	NA	NA	NA
WP_003152668.1\|2767312_2768170_-	prephenate dehydratase	NA	NA	NA	NA
WP_007408173.1\|2768183_2768627_-	transcriptional regulator ThrR	NA	NA	NA	NA
WP_003152665.1\|2768680_2769967_-	GTPase ObgE	NA	NA	NA	NA
WP_077722649.1\|2769998_2770577_-	Spo0B domain-containing protein	NA	NA	NA	NA
WP_003152662.1\|2770894_2771179_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_060674727.1\|2771191_2771533_-\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_003152660.1\|2771535_2771844_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_003152659.1\|2771989_2772856_-\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_071391546.1\|2772848_2773652_-	M23 family metallopeptidase	NA	NA	NA	NA
WP_060674730.1\|2773779_2774583_-	septum site-determining protein MinD	NA	NA	NA	NA
WP_003152653.1\|2774585_2775266_-	septum site-determining protein MinC	NA	NA	NA	NA
WP_003152650.1\|2775319_2775838_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_003152649.1\|2775834_2776698_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_003152647.1\|2776728_2777742_-	rod shape-determining protein MreB	NA	NA	NA	NA
WP_007408165.1\|2777833_2778529_-	DNA repair protein RadC	NA	NA	NA	NA
WP_077722651.1\|2778560_2779130_-	septum formation inhibitor Maf	NA	NA	NA	NA
WP_077722652.1\|2779270_2780272_-	SPOR domain-containing protein	NA	NA	NA	NA
WP_071181911.1\|2780398_2781151_-	prepilin peptidase	NA	NA	NA	NA
WP_077722653.1\|2781290_2782583_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_060674740.1\|2782641_2785284_-\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	4.9e-161	42.2
WP_003152639.1\|2785736_2785928_+	hypothetical protein	NA	NA	NA	NA
WP_012118110.1\|2785942_2786965_-\|coat	spore coat protein YsxE	NA	NA	NA	NA
WP_077722654.1\|2786998_2789026_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_077722655.1\|2789158_2790448_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
WP_094247687.1\|2790476_2791451_-	porphobilinogen synthase	NA	NA	NA	NA
WP_077722657.1\|2791453_2792236_-	uroporphyrinogen-III synthase	NA	NA	NA	NA
WP_077722658.1\|2792225_2793167_-	hydroxymethylbilane synthase	NA	NA	NA	NA
WP_077722659.1\|2793201_2794032_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA
WP_003152628.1\|2794039_2795407_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_014305520.1\|2795601_2796093_+	hypothetical protein	NA	NA	NA	NA
WP_003152626.1\|2796125_2796713_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_052827698.1\|2796709_2799034_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.4e-183	44.2
WP_077722660.1\|2799233_2800892_-\|protease	ATP-dependent protease LonB	A0A167RA83	Powai_lake_megavirus	1.9e-14	32.7
WP_003152620.1\|2801041_2802304_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	4.2e-147	65.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage